These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1316#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [TCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAACTGAAAAAATCATATTTAAAAAAAATATTTTATGATTGCAATTCTTCGTAAACTATATTACACATACCGATACTCTCATGATTATTTATTTATCTATATCCATATAGAAATCAAATGTATAATATTAAATAAATAGATATTTTAATGGATAATATTAGAAGTATATAAAAAGAAAACTTACAGGCCAGTTTTACTTCGCCCACAGCGTAGGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCNACCAGCGGGAACTCTAT] [+] EMBL BI507295 [TCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAACTGAAAAAATCATATTTAAAAAAAATATTTTATGATTGCAATTCTTCGTAAACTATATTACACATACCGATACTCTCATGATTATTTATTTATCTATATCCATATAGAAATCAAATGTATAATATTAAATAAATAGATATTTTAATGGATAATATTAGAAGTATATAAAAAGAAAACTTACAGGCCAGTTTTACTTCGCCCACAGCGTAGGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCNACCAGCGGGAACTCTAT] consensusID : consensus_1316#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 499 fasta sequence [CGTCTAAGTAAATAGTCATTACGAAAGTCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAAAGGCCAGTTTTACTTCGCCCACAGCGTAAGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCCACCAGCGGGAACTCTATTAATCTCGATTTCGCGACCATCATCTCCTCTTATGGTGATCCTAACGATACCATCCTCGACAAAATACATTCCATCGGCTGAATCGCCTTGTTTGATGATCTGA] [+] EMBL BI510784 [CGTCTAAGTAAATAGTCATTACGAAAGTCGACTCGAGATGATACTTGAAAACACGCGGATGAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATCATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGAAATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACGCTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAAAGGCCAGTTTTACTTCGCCCACAGCGTAAGCCGAAGCAGCGCGAGGTTTATGTGTCACTAGCGCCAATTCGCCTAAGTATCCACCAGCGGGAACTCTATTAATCTCGATTTCGCGACCATCATCTCCTCTTATGGTGATCCTAACGATACCATCCTCGACAAAATACATTCCATCGGCTGAATCGCCTTGTTTGATGATCTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1316#0 ---------------------------TCGACTCGAGATGATACTTGAAAACACGCGGAT 33 consensus_1316#1 CGTCTAAGTAAATAGTCATTACGAAAGTCGACTCGAGATGATACTTGAAAACACGCGGAT 60 ********************************* consensus_1316#0 GAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATC 93 consensus_1316#1 GAGATTCATAAAGTAGGTGTACAAGTTTGTGCTCATTTTACATTACTGTACAAAAGCATC 120 ************************************************************ consensus_1316#0 ATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGA 153 consensus_1316#1 ATATCTTTAGTACAGCAGTGCAATGTATCACTATCCGCAAATAGTTCATCGAATATCTGA 180 ************************************************************ consensus_1316#0 AATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACG 213 consensus_1316#1 AATATTAGTTTTGCTGCCAAAGATTTTGATTATCTGATCCTCATAATCCTCGATATTACG 240 ************************************************************ consensus_1316#0 CTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAACTGA 273 consensus_1316#1 CTTCATAAGTTCCATGCAAGGCCCAAGTAAGCGTTCAAAAGCTTCAACGTCCAAAA--AG 298 ******************************************************** consensus_1316#0 AAAAATCATATTTAAAAAAAATATTTTATGATTGCAATTCTTCGTAAACTATATTACACA 333 consensus_1316#1 GCCAGTTTTACTTCGCCCACAGCGTAAGCCGAAGCAGCGCGAGGTTTA-TGTGTCACTAG 357 * * ** ** * * * *** * ** * * * * ** consensus_1316#0 TACCGATACTCTCATGATTATTTATTTAT-----CTATATCCATATAGAAATCAAATGTA 388 consensus_1316#1 CGCCAAT--TCGCCTAAGTATCCACCAGCGGGAACTCTATTAATCTCGATTTCGCGACCA 415 ** ** ** * * * *** * ** *** ** * ** ** * consensus_1316#0 TAATATTAAATAAATAGATATTTTAATGGATAATATTAGAAGTATATAAAAAGAAAACTT 448 consensus_1316#1 TCATCTCCTCTTA-TGGTGATCCTAACG-ATACCATCCTCGAC-----AAAATACATTCC 468 * ** * * * * * ** *** * *** ** **** * * consensus_1316#0 ACAGGCCAGTTTTACTTCGCCCACAGCGTAGGCCGAAGCAGCGCGAGGTTTATGTGTCAC 508 consensus_1316#1 ATCGGCTGAATCGCCTTGTTTGATGATCTGA----------------------------- 499 * *** * *** * * consensus_1316#0 TAGCGCCAATTCGCCTAAGTATCNACCAGCGGGAACTCTAT 549 consensus_1316#1 ----------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |