These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1319#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 517 fasta sequence [CATATTCATCGCCCAGATGCACGGGATCGCCTTGGGATTCGGTGAAATCATAACTGTTATGTGAGTAAAAAAAAAATTTTCTCCATTTATCTGTGTATATGAGTGTAAGAGTTTCTTCTCTCCTCTTTTCTCGTTCAAGCTTAACCTCGACCGCTGCGTCGGTGTCGTCGGCGTCGGTCCCAAGCGCGGCACTGGTCCTCCTCCTGGTCGTGTTGAGCGCCATCAACGCACCCGTCTACAACGTCTCCCTTCTCTTCACCATCGATTGGTTCGTGGATCGCATCCGTACCACGAACAACATGTTGGGCGATTGCTACGCCGCAGCCGTGGTCGAGCAGTTGTCGAAAAAGGAATTGATGGCGCTGGACGCGGCAGCCTATCAATCGGAAACCGTTTTGCCCACAACGATCGCGAACGGATGCATTTCCGCAAACAGGGTACCTGATCCCGACACCATCGTCGTCGAGATGCAAGACGACACGAGGATAGCCGGCGTCGCCAAGTAAACAAGCTTGTT] [+] EMBL BI508601 [CATATTCATCGCCCAGATGCACGGGATCGCCTTGGGATTCGGTGAAATCATAACTGTTATGTGAGTAAAAAAAAAATTTTCTCCATTTATCTGTGTATATGAGTGTAAGAGTTTCTTCTCTCCTCTTTTCTCGTTCAAGCTTAACCTCGACCGCTGCGTCGGTGTCGTCGGCGTCGGTCCCAAGCGCGGCACTGGTCCTCCTCCTGGTCGTGTTGAGCGCCATCAACGCACCCGTCTACAACGTCTCCCTTCTCTTCACCATCGATTGGTTCGTGGATCGCATCCGTACCACGAACAACATGTTGGGCGATTGCTACGCCGCAGCCGTGGTCGAGCAGTTGTCGAAAAAGGAATTGATGGCGCTGGACGCGGCAGCCTATCAATCGGAAACCGTTTTGCCCACAACGATCGCGAACGGATGCATTTCCGCAAACAGGGTACCTGATCCCGACACCATCGTCGTCGAGATGCAAGACGACACGAGGATAGCCGGCGTCGCCAAGTAAACAAGCTTGTT] consensusID : consensus_1319#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 197 fasta sequence [CACGAGGATAGCCGGCGTCGCCAAGTAAACAAGCTTGTTGGTAGGGCTAGGCTATCACTTTGTAAGATTCGCAACGATCGCGATACCATTTCTCTTCCGTTTCTCTCTTTTATTCGTCGCTTTTCTATTTCCTGTGAAAAGAAAAGATTATTTATTCGCGAAACGATTCGATATATATAATCTTTTCTTTTCACAGG] [+] EMBL BI507271 [CACGAGGATAGCCGGCGTCGCCAAGTAAACAAGCTTGTTGGTAGGGCTAGGCTATCACTTTGTAAGATTCGCAACGATCGCGATACCATTTCTCTTCCGTTTCTCTCTTTTATTCGTCGCTTTTCTATTTCCTGTGAAAAGAAAAGATTATTTATTCGCGAAACGATTCGATATATATAATCTTTTCTTTTCACAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1319#0 CATATTCATCGCCCAGATGCACGGGATCGCCTTGGGATTCGGTGAAATCATAACTGTTAT 60 consensus_1319#1 ------------------------------------------------------------ consensus_1319#0 GTGAGTAAAAAAAAAATTTTCTCCATTTATCTGTGTATATGAGTGTAAGAGTTTCTTCTC 120 consensus_1319#1 --------CACGAGGATAGCCGGCGTCGCCAAGTAAACAAGCTTGTTGGTAGGGCTAGGC 52 * * ** * * * ** * * * *** * ** * consensus_1319#0 TCCTCTTTTCTCGTTCAAGCTTAACCTCGACCGCTGCGTCGGTG-TCGTCGGCGTCGGTC 179 consensus_1319#1 TATCACTTTGT-----AAGATTCGCAACGATCGCGATACCATTTCTCTTCCGTTTCTCTC 107 * *** * *** ** * *** *** * * ** ** * ** ** consensus_1319#0 CCAAGCGCGGCACTGGTCCTCCTCCTGGTCGTGTTGAGCGCCATCAACGCACCCGTCTAC 239 consensus_1319#1 TTTTATTCGTCGCTTTTCTATTTCCTGTGAAAAGAAAAGATTATTTATTCGCGAAACGAT 167 ** * ** ** ***** * ** * * * * * consensus_1319#0 AACGTCTCCCTTCTCTTCACCATCGATTGGTTCGTGGATCGCATCCGTACCACGAACAAC 299 consensus_1319#1 TCGATATATATAATCTTTTCTTTTCACAGG------------------------------ 197 * * * **** * * * ** consensus_1319#0 ATGTTGGGCGATTGCTACGCCGCAGCCGTGGTCGAGCAGTTGTCGAAAAAGGAATTGATG 359 consensus_1319#1 ------------------------------------------------------------ consensus_1319#0 GCGCTGGACGCGGCAGCCTATCAATCGGAAACCGTTTTGCCCACAACGATCGCGAACGGA 419 consensus_1319#1 ------------------------------------------------------------ consensus_1319#0 TGCATTTCCGCAAACAGGGTACCTGATCCCGACACCATCGTCGTCGAGATGCAAGACGAC 479 consensus_1319#1 ------------------------------------------------------------ consensus_1319#0 ACGAGGATAGCCGGCGTCGCCAAGTAAACAAGCTTGTT 517 consensus_1319#1 -------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |