Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 136 cluster # 136       Sequences # 7       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_136#0 length = 1068 sequences # 7  
consensusID : consensus_136#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1068
fasta sequence 
                              [TCGTTAGCTGCCGTTACTAGGAGAATCTGGAACGGATATATCGTTAGGAACAGAGTGTCAATCGAGTGAGAAACAGCCGTAGAACGAGATTCTTTGTGATCGTGGCCAAACGTCGATTCCCATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTCGTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGATGATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTACGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGTGACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAACGGTCGCCAC----GACATCTGATCATGTCCTTTCAAATGATGTTTGGATACATTCTCGACGGAGAAAGAGAGACGGGTGATTAGTGACAAGGAGAAGGAAAGAGAGAGAGAGAGAGAAGAAGAACAGGTAGGAGACGAAGAAAAAAGTGTGAAGAGAAGGAAAGGAGACAGAGATTCGGCGTTAACGGAGGAAAGAAAGGGAGGATGGCACTTCGGTATTTGTGCTTGATCAAACCGAATGTGAAGGATCGCGTTGTAAACGCGACGAAACGCAAGGAACGAAGCGAGGTGAGGAAGCACGCGACCGAGGCAACTCGTTTCCCGCGACTCGTAGCCTCGTTGTCTCGTTTCTGAGGGGCGTCCCATCGACGTAGTTTTTACGTGTCCTCCTCGTCAGAACGGCAACGAGCGAGAGGATTCGGCACATTGCCCGTCGGTCGCACGTGCGCATTGATGGTCGACAGTAAAACTCCTTCCAGNGGCAGAATAGACGCGGAATAATCTTCGTGCTTTTTCTCGTGACGAGTTTCTTGTGTCAAACAGGTGAGAGATACGGCCTTCACGCACGNNNCTGGCGAACGAATCACGCGTATTCCGTCCCAGAACGAATATTAATAAATATATATATCTGTAAAAAAAAAATATATATACATATATATATA]

[+] EMBL BI515991             [TCGTTAGCTGCCGTTACTAGGAGAATCTGGAACGGATATATCGTTAGGAACAGAGTGTCAATCGAGTGAGAAACAGCCGTAGAACGAGATTCTTTGTGATCGTGGCCAAACGTCGATTCCCATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTCGTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGATGATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTACGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGTGACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAACGGTCGCCAC    GACATCTGATCATGTCCTTTCAAATGATGTTTGGATACATTCTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BI515676             [                    GAGAATCTGGAACGGATATATCGTTAGGAACAGAGTGTCAATCGAGTGAGAAACAGCCGTAGAACGAGATTCTTTGTGATCGTGGCCAAACGTCGATTCCCATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTCGTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGATGATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTACGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGTGACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAACacgac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BI508433             [                               ACGGATATATCGTTAGGAACAGAGTGTCAATCGAGTGAGAAACAGCCGTAGAACGAGATTCTTTGTGATCGTGGCCAAACGTCGATTCCCATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTCGTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGATGATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTACGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGTGACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAA       CAC    GACATCTGATCATGTCCTTTCAAATGATGTTTGGTTACATTCTCGACGGAGAAAGAGAGACGGGTGATTAGTGACAAGGAGAAGGAAAGAGAGAGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI512206             [                                                                                            TTTGTGATCGTGGCCAAACGTCGATTCCCATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTCGTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGATGATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTACGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGTGACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAACGGTCGCCAC    GACATCTGATCATGTCCTTTCAAATGATGTTTGGATACATTCTCGACGGAGAAAGAGAGACGGGTGATTAGTGACAAGGAGAAGGAAAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BI506004             [                                                                                                                         ATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTCGTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGATGATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTACGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGTGACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAACGGTCGCCACATCTGACATCTGATCATGTCCTTTCAAATGATGTTTGGTTACATTCTCGACGGAGAAAGAGAGACGGGTGATTAGTGACAAGGAGAAGGAAAGAGAGAGAGAGAGAGAAGAAGAACAGGTAGGAGACGAAGAAAAAAGTGTGAAGAGAAGGAAAGGAGACAGAGATTCGGCGTTAACGGAGGAAAGAAAGGGAGGATGGCACTTCGGTATTTGTGCTTGGTCAAACCGAATGTGAAGGATCGCGTTGTAAACGCGACGAAACGCAAGGAACGAAGCG                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BI512461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAGTGACAAGGAGAAGGAAAGAGAGAGAGATAGAGAAGAAGAACAGGTAGG      AGAAAAAAGTGTGAAGAGAAGGAAAGGAGACAGAGATTCGGCGTTAACGGAGGAAAGAAAGGGAGGATGGCACTTCGGTATTTGTGCTTGATCAAACCGAATGTGAAGGATCGCGTTGTAAACGCGACGAAACGCAAGGAACGAAGCGAGGTGAGGAAGCACGCGACCGAGGCAACTCGTTTCCCGCGACTCGTAGCCTCGTTGTCTCGTTTCTGAGGGGCGTCCCATCGACGTAGTTTTTACGTGTCCTCCTCGTCAGAACGGCAACGAGCGAGAGGATTCGGCACATTGCCCGTCGGTCGCACGTGCGCATTGATGGTCGACAGTAAAACTCCTTCCAGNGGCAGAATAGACGCGGAATAATCTTCGTGCTTTTTCTCGTGACGAGTTTCTTGTGTCAAACAGGTGAGAGATACGGCCTTCACGCACGNNNCTGGCGAACGAATCACGCGTATTCCGTCCCAGAACGAATATTAATAAATATATATATCTGTAAA                           ]
[+] EMBL BI515239             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAGGAGACAGAGATTCGGCGTTAACGGAGGAAAGAAAGGGAGGATGGCACTTCGGTATTTGTGCTTGATCAAACCGAATGTGAAGGATCGCGTTGTAAACGCGACGAAACGCAAGGAACGAAGCGAGGTGAGGAAGCACGCGACCGAGGCAACTCGTTTCCCGCGACTCGTAGCCTCGTTGTCTCGTTTCTGAGGGGCGTCCCATCGACGTAGTTTTTACGTGTCCTCCTCGTCAGAACGGCAACGAGCGAGAGGATTCGGCACATTGCCCGTCGGTCGCACGTGCGCATTGATGGTCGACAGTAAAACTCCTTCCAGAGGCAGAATAGACGCGGAATAATCTTCGTGCTTTTTCTCGTGACGAGTTTCTTGTGTCAAACAGGTGAGAGATACGGCCTTCACGCACGNNNCTGGCGAACGAATCACGCGTATTCCGTCCCAGAACGAATATTAATAAATATATATATCTGTAAAAAAAAAATATATATACATATATATATA]




>consensus_136#0
TCGTTAGCTGCCGTTACTAGGAGAATCTGGAACGGATATATCGTTAGGAACAGAGTGTCA
ATCGAGTGAGAAACAGCCGTAGAACGAGATTCTTTGTGATCGTGGCCAAACGTCGATTCC
CATCCTCGTTTCTATCGCGGGGGCAGAAGAGAGTGGATGGGCTTGCGAGGAACACGGTTC
GTGGATCGTGTCGAAGCGTGGCAGCGAGGAGCAACGGAGCACGACTCGAGGCGGGCAGAT
GATTTTCGATCGATCGACGGTCGCACGGCATCGAGACTATCGCGCCACCGAGTTTCGTTA
CGTGTGTAGGTTGCCATGCCGTCGAACTGCCGTCGGAGATGCGCATCGACATCGTTCAGT
GACAACGATACTTAGTTGAGCATGTGTCATTTTTGACAGGGAAGAACAACGGTCGCCACG
ACATCTGATCATGTCCTTTCAAATGATGTTTGGATACATTCTCGACGGAGAAAGAGAGAC
GGGTGATTAGTGACAAGGAGAAGGAAAGAGAGAGAGAGAGAGAAGAAGAACAGGTAGGAG
ACGAAGAAAAAAGTGTGAAGAGAAGGAAAGGAGACAGAGATTCGGCGTTAACGGAGGAAA
GAAAGGGAGGATGGCACTTCGGTATTTGTGCTTGATCAAACCGAATGTGAAGGATCGCGT
TGTAAACGCGACGAAACGCAAGGAACGAAGCGAGGTGAGGAAGCACGCGACCGAGGCAAC
TCGTTTCCCGCGACTCGTAGCCTCGTTGTCTCGTTTCTGAGGGGCGTCCCATCGACGTAG
TTTTTACGTGTCCTCCTCGTCAGAACGGCAACGAGCGAGAGGATTCGGCACATTGCCCGT
CGGTCGCACGTGCGCATTGATGGTCGACAGTAAAACTCCTTCCAGNGGCAGAATAGACGC
GGAATAATCTTCGTGCTTTTTCTCGTGACGAGTTTCTTGTGTCAAACAGGTGAGAGATAC
GGCCTTCACGCACGNNNCTGGCGAACGAATCACGCGTATTCCGTCCCAGAACGAATATTA
ATAAATATATATATCTGTAAAAAAAAAATATATATACATATATATATA

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)