These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1360#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence [TGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTCTAAAATAGAATTTATTTAACATATATATATTTTAATAAATATAATAACATAAGATGTGTACATATAATAATATCTATATGTATAAGATTTGTATGAACCCGCAAAAGCCAGACAGTGCAATGAATATAACAATTCTGGGTGAAGCAATTCATTTATTTTAAGACATTCTGAAATCAAACATGAAATGAAATATCATATCTAAGGAACAGATGTCTATAAAATTTTTTCATTGTGTAATTAATCTTTGTGATTAAATTGAATGATATAATTGTGATATAAATCGAGATAAAAGTTTAAGTTTTGGAACTATACTTACTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGA] [+] EMBL BI511639 [TGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTCTAAAATAGAATTTATTTAACATATATATATTTTAATAAATATAATAACATAAGATGTGTACATATAATAATATCTATATGTATAAGATTTGTATGAACCCGCAAAAGCCAGACAGTGCAATGAATATAACAATTCTGGGTGAAGCAATTCATTTATTTTAAGACATTCTGAAATCAAACATGAAATGAAATATCATATCTAAGGAACAGATGTCTATAAAATTTTTTCATTGTGTAATTAATCTTTGTGATTAAATTGAATGATATAATTGTGATATAAATCGAGATAAAAGTTTAAGTTTTGGAACTATACTTACTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGA] consensusID : consensus_1360#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 471 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATAAAGTATCTTTTTATTTATACAATGCTAAAATTTAACGTTTTCCTCCAACACGTGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGAGATGCACCTACAATAGCACGTTGAAATTTTTGAGTACGTCTTGTTCTTTTTTTTGCTTGTTCTTCTTCTTGTCCTTTTTTATGTTTTCGTCTATATAATACAGTCCACGTGACTTTTCTTGGATTACGTCTCATTAAATGTGCGGATTCACATTTTGAATTCAAGAAAGTGAATGTTTTTCCATCCACTTTTACCATG] [-] EMBL BI506903 [TTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATAAAGTATCTTTTTATTTATACAATGCTAAAATTTAACGTTTTCCTCCAACACGTGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTATGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCTTTCTTTTGTTCCTTTGCAGCTTTAATAGCTTGTTCTCTCTGTGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGAGATGCACCTACAATAGCACGTTGAAATTTTTGAGTACGTCTTGTTCTTTTTTTTGCTTGTTCTTCTTCTTGTCCTTTTTTATGTTTTCGTCTATATAATACAGTCCACGTGACTTTTCTTGGATTACGTCTCATTAAATGTGCGGATTCACATTTTGAATTCAAGAAAGTGAATGTTTTTCCATCCACTTTTACCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1360#0 ------------------------------------------------------------ consensus_1360#1 TTTTTTTTTTTTTTTTTTTTTTTTTTTAAATATAAAGTATCTTTTTATTTATACAATGCT 60 consensus_1360#0 --------------------------TGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTA 34 consensus_1360#1 AAAATTTAACGTTTTCCTCCAACACGTGGAGCTGATTTTTGTGTTATTTTTGCAGCTTTA 120 ********************************** consensus_1360#0 TGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCT 94 consensus_1360#1 TGTTTTGGAATAGCCTTTGTTTTAGGAGGTACAACTGCTTTCTTTGTTGCTTTTGCAGCT 180 ************************************************************ consensus_1360#0 TTCTTTTGTTCCTTTGCAGCTCTAAAATAGAATTTATTTAACATATATATATTTTAATAA 154 consensus_1360#1 TTCTTTTGTTCCTTTGCAGCTTTA----ATAGCTTGTTC----TCTCTGTGCTTTACGAA 232 ********************* ** * * ** ** * * * * **** ** consensus_1360#0 ATA-TAATAACATAAGATGTGTACATATAATAATATCTATATGTATAAGATTTGTATGAA 213 consensus_1360#1 TTTCTGGTTTCATATTACGTTT---TGCTAAAATATCTGTAAGAGATGCACCTACAATAG 289 * * * **** * ** * * * ******* ** * * * * * consensus_1360#0 CCCGCAAAAGCCAGACAGTGCAATGAATATAACAATTCTGGGTGAAGCAATTCATTTATT 273 consensus_1360#1 CACGTTGAAATTTTTGAGTACGTCTTGT-TCTTTTTTTTGCTTGTTCTTCTTCTTGTCCT 348 * ** ** *** * * * ** ** ** *** * * * consensus_1360#0 TTAAGACATTCTGAAATCAAACATGAAATGAA-ATATCATATCTAAGGAACAGATGTCTA 332 consensus_1360#1 TTTTTATGTTTTCGTCTATATAATACAGTCCACGTGACTTTTCTT-GGATTACGTCTC-A 406 ** * ** * * * ** * * * * * * *** *** * * ** * consensus_1360#0 TAAAATTTTTTCATTGTGTAATTAATCTTTGTGATTAAATTGAATGATATAATTGTGATA 392 consensus_1360#1 TTAAATGTGCGGATT-CACATTTTGAATTCAAGA---AAGTGAATGTTTTTCCATCCACT 462 * **** * *** * ** ** ** ** ****** * * * consensus_1360#0 TAAATCGAGATAAAAGTTTAAGTTTTGGAACTATACTTACTTAATAGCTTGTTCTCTCTG 452 consensus_1360#1 TTTACCATG--------------------------------------------------- 471 * * * * consensus_1360#0 TGCTTTACGAATTTCTGGTTTCATATTACGTTTTGCTAAAATATCTGTAAGA 504 consensus_1360#1 ---------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |