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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1367#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence
[TCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTTACAATTTACGGCTTATGGCTTATGGCTTGCAGCTTACGGCTTACGGCTTACAGTTCACGATTGTGTAGTTCACTAATTTTCGTTTCTCGATTTTGTTAAATTTGTTAAATTCATTTTGTTTTTTTTTCTTATATACCGAATCCTACGTATTATTCTTCGATAACATGTTTTTCCTATTATATTTTTTATCAAATTTATTTCCATTTAAATTTTTTATTATTGATTAATTGTTTATTTTCAATTGGAATATTAAAGAACTGGTGAGTAATTAAAGAATGGCGAGGAATAAGCATAAAAATATTAATATATACATAAAAATATACAATTTTTTTTCGACGACATCGCAATATAGATATAGTGGAAGAATGATAACCATATACATATGTCTAGATTAACGTCTTATCTTAA]
[+] EMBL BI514618 [TCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTTACAATTTACGGCTTATGGCTTATGGCTTGCAGCTTACGGCTTACGGCTTACAGTTCACGATTGTGTAGTTCACTAATTTTCGTTTCTCGATTTTGTTAAATTTGTTAAATTCATTTTGTTTTTTTTTCTTATATACCGAATCCTACGTATTATTCTTCGATAACATGTTTTTCCTATTATATTTTTTATCAAATTTATTTCCATTTAAATTTTTTATTATTGATTAATTGTTTATTTTCAATTGGAATATTAAAGAACTGGTGAGTAATTAAAGAATGGCGAGGAATAAGCATAAAAATATTAATATATACATAAAAATATACAATTTTTTTTCGACGACATCGCAATATAGATATAGTGGAAGAATGATAACCATATACATATGTCTAGATTAACGTCTTATCTTAA]
consensusID : consensus_1367#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 253 fasta sequence
[GCGCCAATGTATCGAAAGCTTGAATGCATTGATGTGTATATGTGACCAGNNNNTTTTCCACCTAGGAGAAAAGTTTAGTCAGTGATGCGACGCGATTGCAGTTAGAAAGAGAAAAATGTGCACGTTTTTCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTCAAACAAAAAAAAAA]
[+] EMBL BI506825 [GCGCCAATGTATCGAAAGCTTGAATGCATTGATGTGTATATGTGACCAGNNNNTTTTCCACCTAGGAGAAAAGTTTAGTCAGTGATGCGACGCGATTGCAGTTAGAAAGAGAAAAATGTGCACGTTTTTCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTCAAACAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1367#0 TCGCATGAAAGCGAACGTGATATATTTCAATTTTTTCTTCGATTAACGAGAATTTCGCAT 60
consensus_1367#1 ------------------------------------------------------------
consensus_1367#0 CGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTTACAATTTAC 120
consensus_1367#1 -------------------------------------GCGCCAATGTATCGAAAGCTTGA 23
** * * ** * * **
consensus_1367#0 GGCTTATGGCTTATGGCTTGCAGCTTACGGCTTACGGCTTACAGTTCACGATTGTGTAGT 180
consensus_1367#1 -----ATGCATTGATGTGTATATGTGAC--CAGNNNNTTTTCCACCTAGGA--GAAAAGT 74
*** ** * * * * ** * ** * * ** * ***
consensus_1367#0 TCACTAATTTTCGTTTCTCGATTTTGTTAAATTTGTTAAATTCATTTTGTTTTTTTTTCT 240
consensus_1367#1 TTAGTCAGTGATGCGACGCGATTGCAGTTAGAAAGAGAAA---AATGTGCACGTTTTTCG 131
* * * * * * * ***** * * * *** * * ** ******
consensus_1367#0 TATATACCGAATCCTACGTATTATTCTTCGATAACATGTTTTTCCTATTATATTTTTTAT 300
consensus_1367#1 CATG----AAAGCGAACGTGATATATTTCAAT----TTTTTCTTCGATTAACGAGAATTT 183
** ** * **** *** *** ** * *** * * **** * *
consensus_1367#0 CAAATT-TATTTCCATTTAAATTTTTTATTATTGATTAATTGTTTATTTTCAATTGGAAT 359
consensus_1367#1 CGCATCGTGTTCTTGTTTGAATTTATCGACAATTTATAATTTGCAGTGAAGAATTCAAAC 243
* ** * ** *** ***** * * * ***** * **** **
consensus_1367#0 ATTAAAGAACTGGTGAGTAATTAAAGAATGGCGAGGAATAAGCATAAAAATATTAATATA 419
consensus_1367#1 AAAAAAAAAA-------------------------------------------------- 253
* *** **
consensus_1367#0 TACATAAAAATATACAATTTTTTTTCGACGACATCGCAATATAGATATAGTGGAAGAATG 479
consensus_1367#1 ------------------------------------------------------------
consensus_1367#0 ATAACCATATACATATGTCTAGATTAACGTCTTATCTTAA 519
consensus_1367#1 ----------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |