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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1373#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence
[TACCATCATTTAATATGGGCAATATGTTTTCAAATTTTGATAATATGGCATCAAGTGGAAATTGTCATTCCTTTGTATCAAATTCTGTAATGACATTTGGTAGTGATGGTCGTCCACAGGTTTATGAAGAAACCACATCCACAACAACTGTTCCAGGTGGCATAAAAGAAACAAAAACAACAGTCTGTGATTCTCGTACTGGAAAAAAAAAGATGGCTATTGAACATCATATTGGAGATAGAGCACATATTTTAGAAAGAGAACAAAATATTCATAGTGGTGAACAAGAGGAACATCAGGAATTTATTAATCTTGATGAAGAAGAAGCAGAAAGTTTTAATAAAGAATGGGAATCACGTGTTCGTCATTATGGAAATTACCATCATGGAAATTCTCATTATGGTATCCATGGTCATCGAAATAGATTCGATCATAGACAGTTG]
[+] EMBL BI512786 [TACCATCATTTAATATGGGCAATATGTTTTCAAATTTTGATAATATGGCATCAAGTGGAAATTGTCATTCCTTTGTATCAAATTCTGTAATGACATTTGGTAGTGATGGTCGTCCACAGGTTTATGAAGAAACCACATCCACAACAACTGTTCCAGGTGGCATAAAAGAAACAAAAACAACAGTCTGTGATTCTCGTACTGGAAAAAAAAAGATGGCTATTGAACATCATATTGGAGATAGAGCACATATTTTAGAAAGAGAACAAAATATTCATAGTGGTGAACAAGAGGAACATCAGGAATTTATTAATCTTGATGAAGAAGAAGCAGAAAGTTTTAATAAAGAATGGGAATCACGTGTTCGTCATTATGGAAATTACCATCATGGAAATTCTCATTATGGTATCCATGGTCATCGAAATAGATTCGATCATAGACAGTTG]
consensusID : consensus_1373#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 364 fasta sequence
[ATCCTTTCAGTGAAATTTTCCATAAAAATTTATTTTGTTTTATACATTTTAAGTGTTTACGTTATTCTATTTTTAATTATCGATCGTAATCTTTTTCACAAATATTCTGTTTTTCAAAATGTCCTTTTTCGGATCATTGATGAGTGATCTCGACGATGATCCTATTTTTGGATCTCATATTCAATCTATGAGACATATGAATAATATGATGAATTCATTATTTAATGACCCATTTGGTATGATGGGTCATCCTAGCCATAATGCTATTGCACATGCTAATCATAGGAATCGAAATCATCAGGATGATCTTCAAGTATTACCATTTGGATTTCCACCATTACCATCATTTAATATGGGCAATATG]
[+] EMBL BI506779 [ATCCTTTCAGTGAAATTTTCCATAAAAATTTATTTTGTTTTATACATTTTAAGTGTTTACGTTATTCTATTTTTAATTATCGATCGTAATCTTTTTCACAAATATTCTGTTTTTCAAAATGTCCTTTTTCGGATCATTGATGAGTGATCTCGACGATGATCCTATTTTTGGATCTCATATTCAATCTATGAGACATATGAATAATATGATGAATTCATTATTTAATGACCCATTTGGTATGATGGGTCATCCTAGCCATAATGCTATTGCACATGCTAATCATAGGAATCGAAATCATCAGGATGATCTTCAAGTATTACCATTTGGATTTCCACCATTACCATCATTTAATATGGGCAATATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1373#0 TACCATCATTTAATATGGGCAATATGTTTTCAAATTTTGATAATATGGCATCAAGTGGAA 60
consensus_1373#1 ------------------------------------------------------------
consensus_1373#0 ATTGTCATTCCTTTGTATCAAATTCTGTAATGACATTTGGTAGTGATGGTCGTCCACAGG 120
consensus_1373#1 -------ATCCTTTCAGTGAAATTTTCCATAAAAATTTATTTTGTTTTATACATTTTAAG 53
****** * ***** * * * **** * * * * *
consensus_1373#0 TTTATGAAGAAACCACATCCACAACAACTGTTCCAGGTGGCATAAAAGAAACAAAAACAA 180
consensus_1373#1 TGT-TTACGTTATTCTATTTTTAATTATCGATC---GTAATCTTTTTCACAAATATTCTG 109
* * * * * * ** ** * * ** ** * * * * * *
consensus_1373#0 CAGTCTGTGAT-TCTCGTACTGGAAAAAAAAAGATGGCTATTGAACATCATATTGGAGAT 239
consensus_1373#1 TTTTTCAAAATGTCCTTTTTCGGATCATTGATGAGTGATCTCGACGATGATCCTATTTTT 169
* ** ** * *** * * ** * * * ** ** ** * *
consensus_1373#0 AGAGCACATATTTTAGAAAGAGAACAAAATATTCATAGTGGTGAACAAGAGGAACATCAG 299
consensus_1373#1 GGATCTCATATTCAATCTATGAGACATATGAATAATA-TGATGAATTCATTAT---TTAA 225
** * ****** * * *** * * * *** ** **** * *
consensus_1373#0 GAATTTATTAATCTTGATGAAGAAGAAGCAGAAAGTTTTAATAAAGAATGGGAATCACGT 359
consensus_1373#1 TGACCCATTTGGTATGATGGGTCATCCTAGCCATAATGCTATTGCACATGCTAATCATAG 285
* *** ***** * * * ** *** *****
consensus_1373#0 GT-TCGTCATTATGGAAATTACCATCATGGAAATTCTCATTATGGTATCCATGGTCATCG 418
consensus_1373#1 GAATCGAAATCATCAGGATGATCTTCAAGT--ATTACCATTTGGATTTCCACCATTACCA 343
* *** ** ** ** * * *** * *** **** * * **** * * *
consensus_1373#0 AAATAGATTCGATCATAGACAGT-TG 443
consensus_1373#1 TCAT----TTAAT-ATGGGCAATATG 364
** * ** ** * ** * **
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |