These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1387#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence [GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCCGTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAAAGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAGGAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGAGAGAAAAA] [+] EMBL BI507930 [GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCCGTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAAAGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAGGAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGAGAGAAAAA] consensusID : consensus_1387#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 279 fasta sequence [TTTTTTTTTTTCATTTCATCTAAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTT] [-] EMBL BI506706 [TTTTTTTTTTTCATTTCATCTAAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAGTTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGCGAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTGCGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCAAAATTACTTAGGACATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1387#0 GACTATCCGGGACCAATCATACTTTCTGACACGAAACAACAAGCGTTTCCTAGTTCTGCC 60 consensus_1387#1 ------------------------------------------------------------ consensus_1387#0 GTTCGGTATGCAAGAATAAAATTTTCTTAGACGAATACAAAGAGGACAAAAAAGAAAGAA 120 consensus_1387#1 ------------------------------------------------------------ consensus_1387#0 AGAAAGAAAGAAAGGAAAAGAAAACTTATTTAAAAAAAAGAAAAAAAGAAAAAAAAAGAG 180 consensus_1387#1 ---------------------------------------TTTTTTTTTTTCATTTCATCT 21 * * consensus_1387#0 GAACGTTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAG 240 consensus_1387#1 AAACTCTTAATTAAATAAAAAAAAAAAAAGTAAAAAATCGGCGTTATTTCAGAGTTCAAG 81 *** ****************************************************** consensus_1387#0 TTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGC 300 consensus_1387#1 TTCAAGCCGACCGATGTCAATTCCTTCAGGTACGCTTATGCGTTATCGCGAGAACAATGC 141 ************************************************************ consensus_1387#0 GAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTG 360 consensus_1387#1 GAAGAAAACAAATAAAAATTCGGTTTTTTCTAAACGTACCAAATCGATGTCTTTTCATTG 201 ************************************************************ consensus_1387#0 CGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCA 420 consensus_1387#1 CGACTGTATTTAATGTATTTAGGATCGGACACATCGATTGTTGTAGTCGTTGGTCATCCA 261 ************************************************************ consensus_1387#0 AAATTACTTAGGACATTTGTTCGAGTGTTGTAGGTACAGAGAATTAAAAAAAGAAAAAGA 480 consensus_1387#1 AAATTACTTAGGACATTT------------------------------------------ 279 ****************** consensus_1387#0 GAGAAAAA 488 consensus_1387#1 -------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |