These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1388#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 425 fasta sequence [CGGGAGCCCTTCGGTCTCAGCTCGGTTAGAAATTCGGCTGAAAAGGTGGAGGGCCCGGGGACGCAAGAAGCTAAGGAGTCGGTGAACGGCTCGAGGGCCGAGGTCGGACCGGACGTCGCCTCCAAACTGAGCAGTTTGTTCGCCGGACTTCCCAGTTTGGCGGGTCCCCAACGCCTCGCCACTTCCCTCAGGCAGAAATTCGCCAATAACTCCGGTTACCCCCGGCCCGGCCTGATGCGCGCCGCCCCAATCGCGACGATTCCTTCGTCACGATCGCTCCCAAGGTCGATCATCCAGTGATCGCGTGATTTAGTCCTCCTCCCGCCCCCCCTCTGCCGGAGGACGTGCCAGTTAAGGCTCGGTCATTAAGGAGAGATATACATAGATCGGCCGGGCACGATGACGACCATACCGATACTCAACAT] [+] EMBL BI511684 [CGGGAGCCCTTCGGTCTCAGCTCGGTTAGAAATTCGGCTGAAAAGGTGGAGGGCCCGGGGACGCAAGAAGCTAAGGAGTCGGTGAACGGCTCGAGGGCCGAGGTCGGACCGGACGTCGCCTCCAAACTGAGCAGTTTGTTCGCCGGACTTCCCAGTTTGGCGGGTCCCCAACGCCTCGCCACTTCCCTCAGGCAGAAATTCGCCAATAACTCCGGTTACCCCCGGCCCGGCCTGATGCGCGCCGCCCCAATCGCGACGATTCCTTCGTCACGATCGCTCCCAAGGTCGATCATCCAGTGATCGCGTGATTTAGTCCTCCTCCCGCCCCCCCTCTGCCGGAGGACGTGCCAGTTAAGGCTCGGTCATTAAGGAGAGATATACATAGATCGGCCGGGCACGATGACGACCATACCGATACTCAACAT] consensusID : consensus_1388#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 288 fasta sequence [GAGACACGCCGAGACGCCCCTGCCATCGGGAGCCCTTCGGTCTCAGCTCGGTTAGAAATTCGGCTGAAAAGGTGGAGGGCCCGGGGACGCAAGAAGCTAAGGAGTCGGTGAACGGCTCGAGGGCCGAGGTCGGACCGGACGTCGCCTCCAAACTGAGCAGTTTGTTCGCCGGACTTCCCAGTTTGGCGGGTCCCCAACGCCTCGCCACTTCCCTCAGGCAGAAATTCGCCAATAACTCCGAGGGATGGCGGGATTCGGTGTTGGGGGCCTCGCGTCGTTTATTGGTGA] [+] EMBL BI506704 [GAGACACGCCGAGACGCCCCTGCCATCGGGAGCCCTTCGGTCTCAGCTCGGTTAGAAATTCGGCTGAAAAGGTGGAGGGCCCGGGGACGCAAGAAGCTAAGGAGTCGGTGAACGGCTCGAGGGCCGAGGTCGGACCGGACGTCGCCTCCAAACTGAGCAGTTTGTTCGCCGGACTTCCCAGTTTGGCGGGTCCCCAACGCCTCGCCACTTCCCTCAGGCAGAAATTCGCCAATAACTCCGAGGGATGGCGGGATTCGGTGTTGGGGGCCTCGCGTCGTTTATTGGTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1388#0 --------------------------CGGGAGCCCTTCGGTCTCAGCTCGGTTAGAAATT 34 consensus_1388#1 GAGACACGCCGAGACGCCCCTGCCATCGGGAGCCCTTCGGTCTCAGCTCGGTTAGAAATT 60 ********************************** consensus_1388#0 CGGCTGAAAAGGTGGAGGGCCCGGGGACGCAAGAAGCTAAGGAGTCGGTGAACGGCTCGA 94 consensus_1388#1 CGGCTGAAAAGGTGGAGGGCCCGGGGACGCAAGAAGCTAAGGAGTCGGTGAACGGCTCGA 120 ************************************************************ consensus_1388#0 GGGCCGAGGTCGGACCGGACGTCGCCTCCAAACTGAGCAGTTTGTTCGCCGGACTTCCCA 154 consensus_1388#1 GGGCCGAGGTCGGACCGGACGTCGCCTCCAAACTGAGCAGTTTGTTCGCCGGACTTCCCA 180 ************************************************************ consensus_1388#0 GTTTGGCGGGTCCCCAACGCCTCGCCACTTCCCTCAGGCAGAAATTCGCCAATAACTCCG 214 consensus_1388#1 GTTTGGCGGGTCCCCAACGCCTCGCCACTTCCCTCAGGCAGAAATTCGCCAATAACTCCG 240 ************************************************************ consensus_1388#0 GTTACCCCCGGCCCGGCCTGATGCGCGCCGCCCCAATCGCGACGATTCCTTCGTCACGAT 274 consensus_1388#1 AGGGATGGCGG---GATTCGGTGTTGGGGGCC----TCGCGTCG-TTTATTGGTGA---- 288 *** * * ** * *** ***** ** ** ** ** * consensus_1388#0 CGCTCCCAAGGTCGATCATCCAGTGATCGCGTGATTTAGTCCTCCTCCCGCCCCCCCTCT 334 consensus_1388#1 ------------------------------------------------------------ consensus_1388#0 GCCGGAGGACGTGCCAGTTAAGGCTCGGTCATTAAGGAGAGATATACATAGATCGGCCGG 394 consensus_1388#1 ------------------------------------------------------------ consensus_1388#0 GCACGATGACGACCATACCGATACTCAACAT 425 consensus_1388#1 ------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |