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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1393#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 555 fasta sequence
[AATCAGCTCAAATTAGTTTAAATACAAATAGCCTAAAACACATCTTTGTTTACATACTTGATATTATTATTATTACTATTATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAAAAACGATGAAATCAACGTGGATTAATTAAGAAATAAAAAATAAAAAAAAAAAAAAAGAAACGAAAACGCGGGTGTGCTTTTGAGCGATGAGAAACCATGTACACATATACACAACACGCACACTTACAAATAAGAAAAAAAATACACAAAACACACAGGATACATACAAGTACACGCGTACAAACACGTACACATACCGTATGCTTNNNGTTTAGTAGCGATTTATAAACGATAAGTGATAGAGTAATTTAAATTGATCATTGCTATCGATGACTATTATCGAC]
[+] EMBL BI506667 [AATCAGCTCAAATTAGTTTAAATACAAATAGCCTAAAACACATCTTTGTTTACATACTTGATATTATTATTATTACTATTATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAAAAACGATGAAATCAACGTGGATTAATTAAGAAATAAAAAATAAAAAAAAAAAAAAAGAAACGAAAACGCGGGTGTGCTTTTGAGCGATGAGAAACCATGTACACATATACACAACACGCACACTTACAAATAAGAAAAAAAATACACAAAACACACAGGATACATACAAGTACACGCGTACAAACACGTACACATACCGTATGCTTNNNGTTTAGTAGCGATTTATAAACGATAAGTGATAGAGTAATTTAAATTGATCATTGCTATCGATGACTATTATCGAC]
consensusID : consensus_1393#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence
[TCAAGTTTCGTATCAACGATGTTGCGAATAATTCGCGGATTCGAAATATTATTTTCATTCTTCGTGTACATGATCGTCTCGATAATTACTGTTAGACCGTTAAATTCGTACTATCGGGCATTGATTAATTAGGATCATCACACCGTGGCTCGCCACAACGTGCGTCTGTGACGGTTGATAGTAGCATCAAAATGATCATTCAAGTAGTCGCACTCTCTATCATAAGTTATTAATTATCATTATCGTTATCATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAA]
[-] EMBL BI511505 [TCAAGTTTCGTATCAACGATGTTGCGAATAATTCGCGGATTCGAAATATTATTTTCATTCTTCGTGTACATGATCGTCTCGATAATTACTGTTAGACCGTTAAATTCGTACTATCGGGCATTGATTAATTAGGATCATCACACCGTGGCTCGCCACAACGTGCGTCTGTGACGGTTGATAGTAGCATCAAAATGATCATTCAAGTAGTCGCACTCTCTATCATAAGTTATTAATTATCATTATCGTTATCATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGTTCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAAAAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGAGTAATCGACTGAAATGCGGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1393#0 ------------------------------------------------------------
consensus_1393#1 TCAAGTTTCGTATCAACGATGTTGCGAATAATTCGCGGATTCGAAATATTATTTTCATTC 60
consensus_1393#0 ------------------------------------------------------------
consensus_1393#1 TTCGTGTACATGATCGTCTCGATAATTACTGTTAGACCGTTAAATTCGTACTATCGGGCA 120
consensus_1393#0 ------------------------------------------------AATCAGCTCAAA 12
consensus_1393#1 TTGATTAATTAGGATCATCACACCGTGGCTCGCCACAACGTGCGTCTGTGACGGTTGATA 180
* * * * *
consensus_1393#0 TTAGTTTAAATACAAATAGCCTAAAACACATCTTTGTTTACATACTTGAT--ATTATTAT 70
consensus_1393#1 GTAGCATCAAAATGATCATTCAAGTAGTCGCACTCTCTATCATAAGTTATTAATTATCAT 240
*** * ** * * * * * * * * * **** * ** ***** **
consensus_1393#0 TATTACTATTATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGT 130
consensus_1393#1 TATCGTTATCATTATTAATATTATTATTATTATTATATTATATTATATTATTTTTATTGT 300
*** *** **************************************************
consensus_1393#0 TCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAA 190
consensus_1393#1 TCTTTTTTTTTTACTCCATGTTTTTTAGTTCTCGTTATTACGTTTAAAGGCGACAACAAA 360
************************************************************
consensus_1393#0 AAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGA 250
consensus_1393#1 AAGAGAAGTGTGACAAATGATAAAATGCCAAGCATCGATCGGTGTGTATTTCGATTTCGA 420
************************************************************
consensus_1393#0 GTAATCGACTGAAATGCGGAAAAACGATGAAATCAACGTGGATTAATTAAGAAATAAAAA 310
consensus_1393#1 GTAATCGACTGAAATGCGGAA--------------------------------------- 441
*********************
consensus_1393#0 ATAAAAAAAAAAAAAAAGAAACGAAAACGCGGGTGTGCTTTTGAGCGATGAGAAACCATG 370
consensus_1393#1 ------------------------------------------------------------
consensus_1393#0 TACACATATACACAACACGCACACTTACAAATAAGAAAAAAAATACACAAAACACACAGG 430
consensus_1393#1 ------------------------------------------------------------
consensus_1393#0 ATACATACAAGTACACGCGTACAAACACGTACACATACCGTATGCTTNNNGTTTAGTAGC 490
consensus_1393#1 ------------------------------------------------------------
consensus_1393#0 GATTTATAAACGATAAGTGATAGAGTAATTTAAATTGATCATTGCTATCGATGACTATTA 550
consensus_1393#1 ------------------------------------------------------------
consensus_1393#0 TCGAC 555
consensus_1393#1 -----
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |