These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1422#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence [GCGAAATTTTATTGATAAGATACCGCTTACCACTAAATTTAATACACATCACATAATTTCCTTATTGTAATGTGACTGTTAGGAATATATACAAAAAGCCATTATAGAGAATTCCTTGATATAAGATGATACATCAAAAAATGTATAGAATTCATTTAAGGTACGTATGAAGACATCCTATTTCTCTAAATGCGAATGGTGTTTTTTCAGATGACAAGTGTACAATCAAAATTACGTATAACTAATGTACACAGATTGGTTCCATTAAGTAAATCATGTACAATTATTTAATTATACTTAAGCCGATTGTTAATTACATTCACTTCTTTTGTTTCGCTGTCCCTCATTTTACAAGATCTAAAGAATTTCACTTATCCATAATACGATGTACATGTTAATTACAAGTAGTAATGTCAAAAAAATCNNNGTTTCTTAAAAAGAAAGGCATGAAAAATTGGCTTCTTAAATATATTTAGTCGTAGAAAAAAAGNNNCAAAAAGAGGAAAGAAATAATAAGCAACGAGTTATATATGTGACGTTACCAAATGGTGTAATTATCGCATTATCGAATTTTTTCAAGAACGCT] [+] EMBL BI506477 [GCGAAATTTTATTGATAAGATACCGCTTACCACTAAATTTAATACACATCACATAATTTCCTTATTGTAATGTGACTGTTAGGAATATATACAAAAAGCCATTATAGAGAATTCCTTGATATAAGATGATACATCAAAAAATGTATAGAATTCATTTAAGGTACGTATGAAGACATCCTATTTCTCTAAATGCGAATGGTGTTTTTTCAGATGACAAGTGTACAATCAAAATTACGTATAACTAATGTACACAGATTGGTTCCATTAAGTAAATCATGTACAATTATTTAATTATACTTAAGCCGATTGTTAATTACATTCACTTCTTTTGTTTCGCTGTCCCTCATTTTACAAGATCTAAAGAATTTCACTTATCCATAATACGATGTACATGTTAATTACAAGTAGTAATGTCAAAAAAATCNNNGTTTCTTAAAAAGAAAGGCATGAAAAATTGGCTTCTTAAATATATTTAGTCGTAGAAAAAAAGNNNCAAAAAGAGGAAAGAAATAATAAGCAACGAGTTATATATGTGACGTTACCAAATGGTGTAATTATCGCATTATCGAATTTTTTCAAGAACGCT] consensusID : consensus_1422#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 379 fasta sequence [TACAATGTTGCTCTTTTTTTTTTTTTTCTTTTTCTTTTTCTCTTGAACCATGAAACTGACAGTGCAACAACACAACATTTTTGTAAGCGTTCTTGAAAAAATTCGATAATGCGATAATTACACCATTTGGTAACGTCACATATATAACTCGTTGCTTATTATTTCTTTTCTCTTTTTTTTCTTTTTCTCCTTTTGTTTAACGATTTCTTAATTATAGGCCTCTGGCAGAGGCGATTCTTGCGAATGCGTTCCACAGGCATCTAGGCACGACAGATATATAAAAGTAGTACGTTCAGGAATTTTTAGATTTATGACAATCCATTATTCTAAAATAGTGCTATCACGTTCATCTAAACTCTAAAACGACTTTTCACTTCTT] [+] EMBL BI510537 [TACAATGTTGCTCTTTTTTTTTTTTTTCTTTTTCTTTTTCTCTTGAACCATGAAACTGACAGTGCAACAACACAACATTTTTGTAAGCGTTCTTGAAAAAATTCGATAATGCGATAATTACACCATTTGGTAACGTCACATATATAACTCGTTGCTTATTATTTCTTTTCTCTTTTTTTTCTTTTTCTCCTTTTGTTTAACGATTTCTTAATTATAGGCCTCTGGCAGAGGCGATTCTTGCGAATGCGTTCCACAGGCATCTAGGCACGACAGATATATAAAAGTAGTACGTTCAGGAATTTTTAGATTTATGACAATCCATTATTCTAAAATAGTGCTATCACGTTCATCTAAACTCTAAAACGACTTTTCACTTCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1422#0 GCGAAATTTTATTGATAAGATACCGCTTACCACTAAATTTAATACACATCACATAATTTC 60 consensus_1422#1 ------------------------------------------------------------ consensus_1422#0 CTTATTGTAATGTGACTGTTAGGAATATATACAAAAAGCCATTATAGAGAATTCCTTGAT 120 consensus_1422#1 ------------------------------------------------------------ consensus_1422#0 ATAAGATGATACATCAAAAAATGTATAGAATTCATTTAAGGTACGTATGAAGACATCCTA 180 consensus_1422#1 ---------------------------------------------TACAATGTTGCTCTT 15 ** * * ** consensus_1422#0 TTTCTCTAAATGCGAATGGTGTTTTTTCAGA--TGACAAGTGTACAAT----CAAAATTA 234 consensus_1422#1 TTTTTTTTTTTTCTTTTTCTTTTTCTCTTGAACCATGAAACTGACAGTGCAACAACACAA 75 *** * * * * * * *** * ** ** *** * *** * * consensus_1422#0 CGTATAACTAA-TGTACACAGATTGGTTCCATTAAGTAAATCATGTACAATTATTTAATT 293 consensus_1422#1 CATTTTTGTAAGCGTTCTTGAAAAAATTCGATAATGCGATAATTACACCATTTGGTAACG 135 * * * *** ** * * *** ** * * * * ** *** *** consensus_1422#0 ATACTTAAGCCGATTGTTAATTACATTCACTTCTTTTGTTTCGCTGTCCCTCATTTTACA 353 consensus_1422#1 TCACATATATAACTCGTTGCTTA---TTATTTCTTTTCTCTTTTTTTTCTTTTTCTCCTT 192 ** ** * *** *** * * ******* * * * * * * * * consensus_1422#0 AGATCTAAAGAATTTCACTTATCCATAATACGATGTACATGTTAATTACAAGTAGTAATG 413 consensus_1422#1 TTGTTTAACGATTT---CTTAATTATAGGCCTCTGGCAGAGGCGATTCTTGCGAATGCGT 249 * *** ** ** **** *** * ** * *** * * consensus_1422#0 TCAAAAAAATCNNNGTTTCTTAAAAAGAAAGGCATGAAAAATTGGCTTCTT-AAATATAT 472 consensus_1422#1 TCCA-------CAGGCATCTAGGCACGACAGATATATAAAAGTAGTACGTTCAGGAATTT 302 ** * * *** * ** ** ** **** * * ** * ** * consensus_1422#0 TTAGTCGTAGAAAAAAAGNNNCAAAAAGAGGAAAGAAATAATAAGCAACGAGTTATATAT 532 consensus_1422#1 TTAGATTTATGACAATCCATTATTCTAAAATAGTGCTATCACGTTCATCTAAACTCTAAA 362 **** ** * ** * * * * ** * ** * * * consensus_1422#0 GTGACGTTACCAAATGGTGTAATTATCGCATTATCGAATTTTTTCAAGAACGCT 586 consensus_1422#1 ACGAC-TTTTCACTTCTT------------------------------------ 379 *** ** ** * * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |