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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1482#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[TATTTAAAATATTTATTATAATATAGGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCNNNGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGTCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGGTATATAATATATTTATTATTATTATATAATTATATAAAGATTAAATATTAAAACTTCTGATAATTATATTTCTTTATAGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGT]
[+] EMBL BI506079 [TATTTAAAATATTTATTATAATATAGGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCNNNGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGTCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGGTATATAATATATTTATTATTATTATATAATTATATAAAGATTAAATATTAAAACTTCTGATAATTATATTTCTTTATAGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGT]
consensusID : consensus_1482#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence
[GGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCTTGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGCCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGTCGTTCTTGGAGGNNGTCAAGATGCTATGGATGTCACAACAACATCAACTCGTCAAGGAAAATTCGATT]
[+] EMBL BI508951 [GGAAAAGAAATAGGTTTACTTCATACAAACAGTTCAGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCTTGCTGTTTATTCAACAGATAAAGCTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTATCACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGCCCTAGAATTTCTGCTATTTTATGGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGGATGTTAGGACAAGAAAAAAATTGACAAGTGTTAAAGGTCATAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATCAAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAAAACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGTCGTTCTTGGAGGNNGTCAAGATGCTATGGATGTCACAACAACATCAACTCGTCAAGGAAAATTCGATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1482#0 TATTTAAAATATTTATTATAATATAGGAAAAGAAATAGGTTTACTTCATACAAACAGTTC 60
consensus_1482#1 -------------------------GGAAAAGAAATAGGTTTACTTCATACAAACAGTTC 35
***********************************
consensus_1482#0 AGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCNNNGCTGTTTATTCAACAGATAAAG 120
consensus_1482#1 AGTGAGAACATGTAGCTTTAGTTACTCAGCAAATCTTG-CTGTTTATTCAACAGATAAAG 94
*********************************** *********************
consensus_1482#0 CTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTAT 180
consensus_1482#1 CTTTAGGACATCAATGTGAAATGTTTATTATGGATATTAAAAATGTTGATGCAGTTTTAT 154
************************************************************
consensus_1482#0 CACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGTCCTAGAATTTCTGCTATTTTAT 240
consensus_1482#1 CACAAGCAGATGCAATTTCTAGAATTGCTGTGAATGGCCCTAGAATTTCTGCTATTTTAT 214
************************************* **********************
consensus_1482#0 GGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGG 300
consensus_1482#1 GGGGTGCATTAGATGAAACAATTATTACTGGCCATGAAGATGGTGAAATCACTCTTTGGG 274
************************************************************
consensus_1482#0 ATGTTAGGGTATATAATATATTTATTATTATTATATAATTATATAAAGATTAAATATTAA 360
consensus_1482#1 ATGTTAGG---------------------------------------------------- 282
********
consensus_1482#0 AACTTCTGATAATTATATTTCTTTATAGACAAGAAAAAAATTGACAAGTGTTAAAGGTCA 420
consensus_1482#1 ----------------------------ACAAGAAAAAAATTGACAAGTGTTAAAGGTCA 314
********************************
consensus_1482#0 TAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATC 480
consensus_1482#1 TAAATCACAAATAAATGATATGCAATTCAACAAGGATGGTACTATGTTTGTAACTGCATC 374
************************************************************
consensus_1482#0 AAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAA 540
consensus_1482#1 AAAAGATAATACTGCCAAATTATTTGATAGTGAATCATTAATGTTATTGAAAACATATAA 434
************************************************************
consensus_1482#0 AACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGT--------- 591
consensus_1482#1 AACAGAAAGACCTGTTAATTCTGCTACAATTTCTCCAATTTTTGATCATGTCGTTCTTGG 494
***************************************************
consensus_1482#0 -----------------------------------------------------------
consensus_1482#1 AGGNNGTCAAGATGCTATGGATGTCACAACAACATCAACTCGTCAAGGAAAATTCGATT 553
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |