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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_150#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 767 fasta sequence
[TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATTCTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACGCGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAAAGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA]
[+] EMBL BI510339 [TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATTCTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACGCGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTT ]
[+] EMBL BI510155 [ GCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAAAGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA]
[+] EMBL BI509473 [ TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAAAGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA]
[+] EMBL BI503013 [ TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGA ]
[+] EMBL BI510220 [ TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAG ]
consensusID : consensus_150#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 539 fasta sequence
[TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATAAAAATGTATAATATATAGATTGCGAATTTTTGGAAATGAATGTACAATAAT]
[+] EMBL BI510190 [TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATAAAAATGTATAATATATAGATTGCGAATTTTTGGAAATGAATGTACAATAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_150#0 TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATT 60
consensus_150#1 ------------------------------------------------------------
consensus_150#0 CTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACG 120
consensus_150#1 ------------------------------------------------------------
consensus_150#0 CGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAA 180
consensus_150#1 -------------TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAA 47
***********************************************
consensus_150#0 CCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTT 240
consensus_150#1 CCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTT 107
************************************************************
consensus_150#0 TAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCG 300
consensus_150#1 TAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCG 167
************************************************************
consensus_150#0 ATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCA 360
consensus_150#1 ATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCA 227
************************************************************
consensus_150#0 AAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAA 420
consensus_150#1 AAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAA 287
************************************************************
consensus_150#0 AAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCAC 480
consensus_150#1 AAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCAC 347
************************************************************
consensus_150#0 GTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAAT 540
consensus_150#1 GTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAAT 407
************************************************************
consensus_150#0 CATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGC 600
consensus_150#1 CATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGC 467
************************************************************
consensus_150#0 CTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGG 660
consensus_150#1 CTACATATCCTCAGTTGTATAAAAATGTATAATATAT----AGATTGCGAATTTTT--GG 521
********************* ***** * ** *** **** *** * **
consensus_150#0 AAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAA 720
consensus_150#1 AAATGAATGTACAATAAT------------------------------------------ 539
****** ** * *
consensus_150#0 AGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA 767
consensus_150#1 -----------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |