These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1502#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [TCATCGAACGACCAACGTGAAACGGCGTAAAAACCTAATAGCTAAAAGACGCATCATAAAAACGCATTTACACGTGTTTGTAACCATAATCGGTAAACTATCGCGTTTAACAAGTGTATCAACCGCGACACTCGACCACGTGGATCGAATTCTATCGAATACATTTGAATCGAGGCGAGACTTCCTCGTCTGCATCCAATTTCTGGCTCGTTTGTCGCGTGTTTTCGTTCTTCGTTTCTTTGAAAAAAAAAAAAAAAAAAGAAAACTCACAACAAAATAAAATCTAACCAGTTGTAACATAATCCTGTTCCTAGTCTTTTAAATATTTGTACCAAATAAATCTCAGAATCGATCGAACTTACAGTCTAACGAGTTGAATTTTCTCATTCAGGAACATCGGTATCGATAGCACTTCATTNNNAATCGTAGTCCACAACCATCGTCCTCATTTCCGTATCTCGATGAAAATATATATATATATATATATGATACGACAAACTGTTACGATTAATATTTCGAACG] [+] EMBL BI506013 [TCATCGAACGACCAACGTGAAACGGCGTAAAAACCTAATAGCTAAAAGACGCATCATAAAAACGCATTTACACGTGTTTGTAACCATAATCGGTAAACTATCGCGTTTAACAAGTGTATCAACCGCGACACTCGACCACGTGGATCGAATTCTATCGAATACATTTGAATCGAGGCGAGACTTCCTCGTCTGCATCCAATTTCTGGCTCGTTTGTCGCGTGTTTTCGTTCTTCGTTTCTTTGAAAAAAAAAAAAAAAAAAGAAAACTCACAACAAAATAAAATCTAACCAGTTGTAACATAATCCTGTTCCTAGTCTTTTAAATATTTGTACCAAATAAATCTCAGAATCGATCGAACTTACAGTCTAACGAGTTGAATTTTCTCATTCAGGAACATCGGTATCGATAGCACTTCATTNNNAATCGTAGTCCACAACCATCGTCCTCATTTCCGTATCTCGATGAAAATATATATATATATATATATGATACGACAAACTGTTACGATTAATATTTCGAACG] consensusID : consensus_1502#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence [TTACAGTCTAACGAGTTGAATTTTCTCATTCAGGAACATCGGTATCGATAGCACTTCATTGTAAATCGTAGTCCACAACCATCGTCCTCATTTCCGTATCTCGATGAAAATATATATATATATATATATATATATATATATATATATATATGATACGACAAACTGTTACGATTAATATTTCGAACGATGCTCGAATACTTTGCGGTTTCAAAGTTTAAATACAAACAGGAGAGGTACATGATCGAACATGATCGTCTCGACGTTTCGCTATATCTACATTGTAACTGACGGTGCATAGTGGTTGTAAACCGTTGCGGTTTACGAACAACGTTATATACACTCGATTATCGACGTTATTCGAGGCCGTGTGGACGTGATCGAAGATGATTCGACAATAAATAACATACTTGTTTATCACGGCATGACGGTCGTGCTCA] [+] EMBL BI506708 [TTACAGTCTAACGAGTTGAATTTTCTCATTCAGGAACATCGGTATCGATAGCACTTCATTGTAAATCGTAGTCCACAACCATCGTCCTCATTTCCGTATCTCGATGAAAATATATATATATATATATATATATATATATATATATATATATGATACGACAAACTGTTACGATTAATATTTCGAACGATGCTCGAATACTTTGCGGTTTCAAAGTTTAAATACAAACAGGAGAGGTACATGATCGAACATGATCGTCTCGACGTTTCGCTATATCTACATTGTAACTGACGGTGCATAGTGGTTGTAAACCGTTGCGGTTTACGAACAACGTTATATACACTCGATTATCGACGTTATTCGAGGCCGTGTGGACGTGATCGAAGATGATTCGACAATAAATAACATACTTGTTTATCACGGCATGACGGTCGTGCTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1502#0 TCATCGAACGACCAACGTGAAACGGCGTAAAAACCTAATAGCTAAAAGACGCATCATAAA 60 consensus_1502#1 -----------TTACAGTCTAACGA-GTTGAATTTTCTCATTCAGGAACATCGGTATCGA 48 * ** **** ** ** * * * * * ** * consensus_1502#0 AACGCATTTACACGTGTTTGTAACCATAATCGGTAAACTATCGCGTTTAACAA-GTGTAT 119 consensus_1502#1 TA-GCACTTCATTGTA-----AATCGTAGTCCACAA-CCATCGTCCTCATTTCCGTATCT 101 * *** ** ** ** * ** ** ** * **** * * ** * * consensus_1502#0 CAACCGCGACACTCGACCACGTGGATCGAATTCTATCGAATACATTTGAATCGAGGCGAG 179 consensus_1502#1 CGATGAAAATATATATATATATATATATATATATAT-ATATATATATATAT-GATACGAC 159 * * * * * * ** * * *** *** ** * ** ** *** consensus_1502#0 ACTTCCTCGTCTGCATCCAATTTCTGGCTCGTTTGTCGCGTGTTTTCGTTCTTCGTTTCT 239 consensus_1502#1 AAACTGT----TACGATTAATATTTCGAACG--------ATGCTCGAATACTTTGCGGTT 207 * * * * *** * * * ** ** * * *** * * consensus_1502#0 TTGAAAAAAAAAAAAAAAAAAGAAAACTCACAACAAAATAAAATCTAACCAGTTGTAACA 299 consensus_1502#1 TCAAAGTTTAAATACAAACAGGAGAGGT----ACATGATCGAACATGATC-GTCTCGACG 262 * ** *** * *** * ** * * *** ** ** * * * ** ** consensus_1502#0 TAATCCTGTTCCTAGTCTTTTAAATATTTGTACCAAATAAATCTCAGAATCGATCGAACT 359 consensus_1502#1 TTTCGCTATATCTA-CATTGTAACTGACGGTGCATAGTGGTTGT--AAACCGTTGCGGTT 319 * ** * *** ** *** * ** * * * * * ** ** * * consensus_1502#0 TACAGTCTA-ACGAGTTGAATTTTCTCATTCAGGAACATCGGTATCGATAGCACTTCATT 418 consensus_1502#1 TACGAACAACGTTATATACACTCGATTATCGACGTTATTCGAGGCCGTGTGGACGTGATC 379 *** * * * * * * * ** * * *** ** * ** * ** consensus_1502#0 NNNAATCGTA-GTCCACAACCATCGTCCTCATTT-CCGTATCTCGATGAAAATATATATA 476 consensus_1502#1 GAAGATGATTCGACAATAAATAACATACTTGTTTATCACGGCATGACGGTCGTGCTCA-- 437 ** * * * * ** * * * ** *** * * ** * * * consensus_1502#0 TATATATATATGATACGACAAACTGTTACGATTAATATTTCGAACG 522 consensus_1502#1 ---------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |