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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1574#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 686 fasta sequence
[TTGGATTTGGAATTTCTGGAGGTTCCCATTCTCCATCCATTTCAACATCCCAATCATCAGGTTTTACAGAATCAGGATTAGGTATCATTGGTGGTTCATCTTCAAGCCATCCTTCAGGCATAATATCATCTTCATCAACAATTTGTGCTGGAGCATCTTCATCCCAATCATCTGGTTTAATAGCTGATAGATCAGGAATTTTTTCTTTGTCATCCCAATCTTCTGGTTGAATATCAGTTGGATCTTCTATTTCCAAAGGTGGATTGACTGGTGGAGTAAAATCATCCAACAAGGATCCAGAATTTACTATTTTATTATCAATCTTAATTTCAAAACTATTATCTGGCCGAATGATCAAAGTATATAGATGAGGTTGCTTATCTTTGAAAAAATCTTCTAAACGCTCTCTTGGTTTTTTGCAATGCTTCTCTTCTATAGAACCATTTAAAGGATTTTTATGTCGAAAGATAAAATGTAGCTTATGATCATTTCCACATTTATCAGGACCAAACATTATAGTATAAGGAGTTTTATCATGGAATTTTTTTAAATCTTGATGTTCTGGATGTAAAGTAAGCAATTTTAAATAAGCTCCTCCACATTCTTGACTATCTTGAAAATTCACTTCATATTGTACAATTAATGGTTTATCATTGAAATAAAATGGTGTAAATAATTTAGTAGAT]
[+] EMBL BI509107 [TTGGATTTGGAATTTCTGGAGGTTCCCATTCTCCATCCATTTCAACATCCCAATCATCAGGTTTTACAGAATCAGGATTAGGTATCATTGGTGGTTCATCTTCAAGCCATCCTTCAGGCATAATATCATCTTCATCAACAATTTGTGCTGGAGCATCTTCATCCCAATCATCTGGTTTAATAGCTGATAGATCAGGAATTTTTTCTTTGTCATCCCAATCTTCTGGTTGAATATCAGTTGGATCTTCTATTTCCAAAGGTGGATTGACTGGTGGAGTAAAATCATCCAACAAGGATCCAGAATTTACTATTTTATTATCAATCTTAATTTCAAAACTATTATCTGGCCGAATGATCAAAGTATATAGATGAGGTTGCTTATCTTTGAAAAAATCTTCTAAACGCTCTCTTGGTTTTTTGCAATGCTTCTCTTCTATAGAACCATTTAAAGGATTTTTATGTCGAAAGATAAAATGTAGCTTATGATCATTTCCACATTTATCAGGACCAAACATTATAGTATAAGGAGTTTTATCATGGAATTTTTTTAAATCTTGATGTTCTGGATGTAAAGTAAGCAATTTTAAATAAGCTCCTCCACATTCTTGACTATCTTGAAAATTCACTTCATATTGTACAATTAATGGTTTATCATTGAAATAAAATGGTGTAAATAATTTAGTAGAT]
consensusID : consensus_1574#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 586 fasta sequence
[TACCTAATCCTGATTCTGTAAAACCTGATGATTGGGATGTTGAAATGGATGGAGAATGGGAACCTCCAGAAATTCCAAATCCAAAATGTGCTGATGCACCTGGATGTGGATTATATAAGCAAAAAATGAAAAAAAATCCTCGCTATAAAGGCAAATGGTCACCACCTTTGATTAATAATCCAAATTATAAAGGCAAATGGAAGCCAAAATTAATACATAATCCTAATTATTTTAATGATGAACATCCATTCCAAATGATGCCTATCTTTGCTGTAGGCTTTGAACTTTGGTCAATGTCTACAGACATCCTCTTTGACAATATTATTATTACTCATGATGAAGAAGTAGCAAAATATTGGGCTGATAATACATTTGAAGTTCGTCGCGCTCAAATTGCAGAGGAAAGTTGGAGTGTATGGCGTCAAATTGGTACATTTACTGCAGAACATCCTTGGATATGGGGTATATATATAATAGCTCCTGGCTTGCCCATATTGCTAGTAATATATTGTTGCTGCTTTGCTTCTCAGGATAAATATGATTTAAAAGATGATGATAAACAATCTTTAGTGACAAATGAACAAGT]
[+] EMBL BI505780 [TACCTAATCCTGATTCTGTAAAACCTGATGATTGGGATGTTGAAATGGATGGAGAATGGGAACCTCCAGAAATTCCAAATCCAAAATGTGCTGATGCACCTGGATGTGGATTATATAAGCAAAAAATGAAAAAAAATCCTCGCTATAAAGGCAAATGGTCACCACCTTTGATTAATAATCCAAATTATAAAGGCAAATGGAAGCCAAAATTAATACATAATCCTAATTATTTTAATGATGAACATCCATTCCAAATGATGCCTATCTTTGCTGTAGGCTTTGAACTTTGGTCAATGTCTACAGACATCCTCTTTGACAATATTATTATTACTCATGATGAAGAAGTAGCAAAATATTGGGCTGATAATACATTTGAAGTTCGTCGCGCTCAAATTGCAGAGGAAAGTTGGAGTGTATGGCGTCAAATTGGTACATTTACTGCAGAACATCCTTGGATATGGGGTATATATATAATAGCTCCTGGCTTGCCCATATTGCTAGTAATATATTGTTGCTGCTTTGCTTCTCAGGATAAATATGATTTAAAAGATGATGATAAACAATCTTTAGTGACAAATGAACAAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1574#0 TTGGATTTGGAATTTCTGGAGGTTCCCATTCTCCATCCATTTCAACATCCCAATCATCAG 60
consensus_1574#1 ----------------------TACCTAATCCTGATTCTGTAAAACCTGATGATTGGGAT 38
* ** * ** ** * * *** * ** *
consensus_1574#0 GTTTTACAGAATCAGGATTAGGTATCATTGGTGGTTC-ATCTTCAAGCCATCCT--TCAG 117
consensus_1574#1 GTTGAAATGGATGGAGAATGGGAACCTCCAGAAATTCCAAATCCAAAATGTGCTGATGCA 98
*** * * ** ** * ** * * * *** * * *** * ** *
consensus_1574#0 GCATAATATCATCTTCATCAACAATTTGTGCTGGAGCATCTTCATCCCAATCATCTGGTT 177
consensus_1574#1 CCTGGATGTGGATTATATAAGCAAAAAATGAAAAAAAATCCTCGC-------------TA 145
* ** * * ** * *** ** * *** ** *
consensus_1574#0 TAATAGCTGATAGATCAGGAATTTTTTCTTTGTCATCCCAATCTTCTGGTTGAATATCAG 237
consensus_1574#1 TAAAGGCAAATGG-TCACCA-CCTTTGATTAATAATCCAAATTATAAAGGCAAATGGAAG 203
*** ** ** * *** * *** ** * **** *** * * *** **
consensus_1574#0 TTGGATCTTCTATTTCCAAAGGTGGATTGACTGGTGGAGTAAAATCATCCAACAAGGATC 297
consensus_1574#1 CCAAAATTAATACAT--AATCCTAATTATTTTAATGATGAACATCCATTCCAAATGATGC 261
* * ** * ** * * * ** * * * *** * * * * *
consensus_1574#0 CAGAATTTACTATTTTATTATCAATCTTAATTTCAAAACTATTATCTGGCCGAATGATCA 357
consensus_1574#1 CTATCTTTGCTGTAGGCTT--TGAACTTTGGTCAATGTCTACAGACATCCTCTTTGACAA 319
* *** ** * ** * *** * * *** * * *** *
consensus_1574#0 AAGTAT-ATAGATGAGGTTGCTTATCTTTGAAAAAATCTTCTAAACGCTCTCTTGGTTTT 416
consensus_1574#1 TATTATTATTACTCATGATGAAGAAGTAGCAAAATATTGGGCTGATAATACATTTGAAGT 379
* *** ** * * * ** * * **** ** * * ** * *
consensus_1574#0 TTGCAATGCTTCTCTTCTATAGAACCATTTAAAGGATTTTTATGTCGAAAGATAAAATGT 476
consensus_1574#1 TCGTCGCGCTCAAATTGCAGAGGAAAGTTGGAGTG--TATGGCGTCAAATTGGTACATTT 437
* * *** ** * ** * ** * * * * *** ** * ** *
consensus_1574#0 AGCTTATGATCATTTCCACATTTATCAGGACCAAACATTATAGTATAAGGAGTTTTATCA 536
consensus_1574#1 A-CTGCAGAACATCCTTGGAT--ATGGGGTATATATATAATAGCTCCTGGCTTGCCCATA 494
* ** ** *** ** ** ** * * ** **** ** * *
consensus_1574#0 TGGAATTTTTTTAAATCTTGATGTTCTGGATGTAAAG-TAAGCA--ATTTTAAATAAGCT 593
consensus_1574#1 TTGCTAGTAATATATTGTTGCTGCTTTGCTTCTCAGGATAAATATGATTTAAAAGATGAT 554
* * * * * * *** ** * ** * * * * *** * **** *** * * *
consensus_1574#0 CCTCCACATTCTTGACTATCTTGAAAATTCACTTCATATTGTACAATTAATGGTTTATCA 653
consensus_1574#1 GATAAACAATCTTTAGTGACAAATGAACAAGT---------------------------- 586
* *** **** * * * **
consensus_1574#0 TTGAAATAAAATGGTGTAAATAATTTAGTAGAT 686
consensus_1574#1 ---------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |