These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1612#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 515 fasta sequence [TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCTCTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGGTTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTCGACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACACACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCCCTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGAGAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG] [+] EMBL BI516153 [TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCTCTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGGTTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTCGACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACACACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCCCTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGAGAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG] consensusID : consensus_1612#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 194 fasta sequence [GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGGAAAAAAGAAGAAAAAGAAAAAAAAAAA] [+] EMBL BI505640 [GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACTATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTGTCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGGAAAAAAGAAGAAAAAGAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1612#0 TATTATTATTATTATTTTTTTTTTGTCTTTATATTTATCACTTGTTGCACGTTTCTCTCT 60 consensus_1612#1 ------------------------------------------------------------ consensus_1612#0 CTCTCTCTCAGCTCGTATCTCCTTCTTCGTACTACTTCTTCTCTGTCCCCGCCCTGTCGG 120 consensus_1612#1 ------------------------------------------------------------ consensus_1612#0 TTCCATTCCCCCCGCCGTTCTAATCCTCCACCAGGCCCGATGATGCATCGTACGCCATTC 180 consensus_1612#1 ------------------------------------------------------------ consensus_1612#0 GACTCGTAATTAATCGAACGCCCGACCAACGAGCGTGAATCGGGCTCCGGAGTGCAAACA 240 consensus_1612#1 ------------------------------------------------------------ consensus_1612#0 CACCGACCGTGTGCGTTCCGTTTTTCATCGTTTCTTCCATTTTCACCGATCTTTCCCTCC 300 consensus_1612#1 ------------------------------------------------------------ consensus_1612#0 CTCCTTTTCTTCTCTTCTTTCTTCTCTTTCCTTTCCTTTCTACACGCGATGAAACTTTGA 360 consensus_1612#1 ------------------------------------------------------------ consensus_1612#0 GAAATAAAATCGCGAGAGAGAAAGAGAGAACGAGTCTTTAGTTATAATAATTCTCAGACT 420 consensus_1612#1 -------------GCTCTTCATCATGACAACGAGTCTTTAGTTATAATAATTCTCAGACT 47 * * ** ******************************** consensus_1612#0 ATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTG 480 consensus_1612#1 ATCGTAGATAGATTCTCGGAGAGGATTCTCTCTGTTCGATTGGTCGGCAAGAAACTTTTG 107 ************************************************************ consensus_1612#0 TCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTG------------------------- 515 consensus_1612#1 TCGGGAGAAACTCTCCCTCTTTCCTTCTCCTCGTGAAATTATTTTTTTTTTCCAAAAAGG 167 *********************************** consensus_1612#0 --------------------------- consensus_1612#1 AAAAAAGAAGAAAAAGAAAAAAAAAAA 194 |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |