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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1651#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 617 fasta sequence
[GTGGTCAAAATTGCAAAAAACACGAATAGGGAGGACTGCGAGAGAACTCAAAGAAAGCGAGACGAGGTAGCATTGCGCTCATAGGAGACGGGTTGGTTGACTTTGTGAGTGATACGAAATTATTATAAAGCCATGACGAATTCGGTACCGAAATTGAAAAACAAGGTAGACCGGCAGGGTTCGCCAAATGTCGGCATTGATCGACATCATCACCGTTCGATAATTACACTCAAACCGCCGGCGTATGTCCACATGAGTGGGAGATCTCATGGCAGAAGTTCAACCGGCAGATTAAGCTGCAGCCCACACGGTTCTTCAAAAGGTTCGAGAAATTCACCGTTGCGGTATGAATATAGTCCGCGCGGCAGTCCAACAAACAGTTTTTATGCGGGTGCAAAGTTTTCTGAACCGCCATTTCCTGCGAGCCTTCCGAAACCACCGAGCCATTGGACTACGAGACTGATGAGCAGTTGTCAGCAATCCGACAGGATTTGCGATATTTCAAATCATCTGAAGATGATGTTAAACGTCCAAGCCTGATATATAAAGACCAACAGACCGCTAAAAACGGTTACCAGCTCCTAAAAACAAAGAGACAGGTACGATATTATCGTCCC]
[+] EMBL BI510424 [GTGGTCAAAATTGCAAAAAACACGAATAGGGAGGACTGCGAGAGAACTCAAAGAAAGCGAGACGAGGTAGCATTGCGCTCATAGGAGACGGGTTGGTTGACTTTGTGAGTGATACGAAATTATTATAAAGCCATGACGAATTCGGTACCGAAATTGAAAAACAAGGTAGACCGGCAGGGTTCGCCAAATGTCGGCATTGATCGACATCATCACCGTTCGATAATTACACTCAAACCGCCGGCGTATGTCCACATGAGTGGGAGATCTCATGGCAGAAGTTCAACCGGCAGATTAAGCTGCAGCCCACACGGTTCTTCAAAAGGTTCGAGAAATTCACCGTTGCGGTATGAATATAGTCCGCGCGGCAGTCCAACAAACAGTTTTTATGCGGGTGCAAAGTTTTCTGAACCGCCATTTCCTGCGAGCCTTCCGAAACCACCGAGCCATTGGACTACGAGACTGATGAGCAGTTGTCAGCAATCCGACAGGATTTGCGATATTTCAAATCATCTGAAGATGATGTTAAACGTCCAAGCCTGATATATAAAGACCAACAGACCGCTAAAAACGGTTACCAGCTCCTAAAAACAAAGAGACAGGTACGATATTATCGTCCC]
consensusID : consensus_1651#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence
[GTGCCTCTCCAGCTACGTTGAAAGGAAAGTGAGAGAATTCGGACCGACGTGTGTGATTTTATTCGGTGAGAAAAAAGAGTGTAAGTAGAGGTGACCAACGGTCACCGAATGTGGTCAAAATTGCAAAAAACACGAATAGGGAGGACTGCGAGAGAACTCAAAGAAAGCGAGACGAGGTAGCATTGCGCTCATAGGAGGTTCGTAGGATACCCCACCAAGTTTATTCCTCCGCGTTCCCCCTACCCTTTTGCCCTGGATCCCGAGATTATTGCGCAGTTAGAAAATTCATTGAATACAAACATCGTCAAAAACTTCGTTGCATCTTTGGAAAGTGACCCGCGGACATTATACGACGGGTTGGTTGACTTTGTGAGTGATACGAAATTATTATAAAGCCATGACGAATTCGGTACCG]
[+] EMBL BI508725 [GTGCCTCTCCAGCTACGTTGAAAGGAAAGTGAGAGAATTCGGACCGACGTGTGTGATTTTATTCGGTGAGAAAAAAGAGTGTAAGTAGAGGTGACCAACGGTCACCGAATGTGGTCAAAATTGCAAAAAACACGAATAGGGAGGACTGCGAGAGAACTCAAAGAAAGCGAGACGAGGTAGCATTGCGCTCATAGGAGGTTCGTAGGATACCCCACCAAGTTTATTCCTCCGCGTTCCCCCTACCCTTTTGCCCTGGATCCCGAGATTATTGCGCAGTTAGAAAATTCATTGAATACAAACATCGTCAAAAACTTCGTTGCATCTTTGGAAAGTGACCCGCGGACATTATACGACGGGTTGGTTGACTTTGTGAGTGATACGAAATTATTATAAAGCCATGACGAATTCGGTACCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1651#0 GTGGTCAAAATTGCAAAAAACACGAATAGGGAGGACTGCGAGAGAACTCAAAGAAAGCGA 60
consensus_1651#1 ------------------------------------------------------------
consensus_1651#0 GACGAGGTAGCATTGCGCTCATAGGAGACGGGTTGGTTGACTTTGTGAGTGATACGAAAT 120
consensus_1651#1 ------------------------------------------------------------
consensus_1651#0 TATTATAAAGCCATGACGAATTCGGTACCGAAATTGAAAAACAAGGTAGACCGGCAGGGT 180
consensus_1651#1 ---------------------------------GTGCCTCTCCAGCTACGTTGAAAGGAA 27
** * ** ** * ***
consensus_1651#0 TCGCCAAATGTCGGCATTGATCGACATCATCACCGTTCGATAATTACACTCAAACCGCCG 240
consensus_1651#1 AGTGAGAGAATTCGGACCGACGTGTGTGATT-TTATTCGGTGAGAAAAA--AGAGTGTAA 84
* * * * ** * ** **** * * * * * * *
consensus_1651#0 GCGTATGTCCACATGAGTGGGAGATCTCATGGCAGAAGTTCAACCGGCA-GATTAAGCTG 299
consensus_1651#1 GTAGAGGTGACCAACGGTCACCGAATGTG-GTCAAAATTGCAAAAAACACGAATAGG--G 141
* * ** ** ** ** * ** ** * *** ** ** ** * *
consensus_1651#0 CAGCCCACACGGTTCTTCAAAAGGTTCGAGA-AATTCACCGTTGCGGTATGAATATAGTC 358
consensus_1651#1 AGGACTGCGAGAGAACTCAAAGAAAGCGAGACGAGGTAGCATTGCGCT-CATAGGAGGTT 200
* * * * ***** ***** * * * ***** * * **
consensus_1651#0 CGCGCGGCAGTCCAACAAACAGTTTTTATGCGGGTGCAAAGTTTTCTGAACCGCCATTTC 418
consensus_1651#1 CGTAGGATACCCCACCAAG-----TTTATTCCTCCGC---GTTCCCCCTACCCTTTTGCC 252
** * * *** *** ***** * ** *** * *** * *
consensus_1651#0 CTGCGAGCCTTCCGAAACCACCGAGCCATTGGACTACGAGACTGATGAGCA-GTTGTCAG 477
consensus_1651#1 CTGGA----TCCCGAGATTATTGCGCAGTTAGAAAATTCATTGAATACAAACATCGTCAA 308
*** * **** * * * ** ** ** * ** * * ****
consensus_1651#0 CAATCCGACAGGATTTGCGATATTTCAAATCATCTGAAGATGATGTTAAACGTCCAAGCC 537
consensus_1651#1 AAACTTCGTTGCATCTTTGGAA-----AGTGACCCGCGGACATTATACGACGGGTTGGTT 363
** * ** * * * * * * * * ** * * *** *
consensus_1651#0 TGATATATAAAGACCAACAGACCGCTA-AAAACGGTTACCAGCTCCTAAAAACAAAGAGA 596
consensus_1651#1 GACTTTGTGAGTGATACGAAATTATTATAAAGCCATGACGAATTCGGTACCG-------- 415
* * * * * * * ** *** * * ** * ** *
consensus_1651#0 CAGGTACGATATTATCGTCCC 617
consensus_1651#1 ---------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |