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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_166#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 742 fasta sequence
[CGAAACGAGAGTTCGCGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCATATTCACAGATCAGAATT--------GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACACCGCGCCGAACAGTAGACTGAGGCTGTAACCGAAGGGCACTTGACACCAGGCCAATCCTTTGGTAAACATCAATTCAGCGGTCCCGTTTATGTAGGCGCCACCGACCCACGTGGCGATCAAAGTGAAGACGCCAAGAATCGGACCTAAGCCACGGTTAGCAAGTATCAAAGCGTCATGGCCATGGCGGGAT]
[+] EMBL BI508323 [CGAAACGAGAGTTCGCGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCATATTCACAGATCAGAATT GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCAT ]
[+] EMBL BI507950 [ CGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCGTATTCACAAATCAGAATTATCTTGACGAATATAATATTCGATATACCTGCCAGGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCGGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTG ]
[+] EMBL BI503332 [ ACGCGATTCATATTCACAGATCAGAATT GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCGCCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACAC ]
[+] EMBL BI508286 [ ATTCATATTCACAGATCAGAATT GAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACAC ]
[+] EMBL BI506529 [ GACTATGCTGATGTCCGGATTCACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAACAGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCTTGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACACCGCGCCGAACAGTAGACTGAGGCTGTAACCGAAGGGCACTTGACACCAGGCCAATCCTTTGGTAAACATCAATTCAGCGGTCCCGTTTATGTAGGCGCCACCGACCCACGTGGCGATCAAAGTGAAGACGCCAAGAATCGGACCTAAGCCACGGTTAGCAAGTATCAAAGCGTCATGGCCATGGCGGGAT]
consensusID : consensus_166#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence
[TGCCGCGGAAATAGCGCCCAGACCGACAAAGGAGACCCACTGCGGTGTCAAGTATCGGAGAACGATCGGTAATGCTGCATTCGCTTCGTGCGTTATTATACTTTTGTTAAATCCCTGCACGGTTGACCAATCGGTGGCACGTGCCACCACGCCAATTAGAGCTGATGGAAACGCGAGGATCATGCAACCGAACATCGATGTTATCGACAAAGCGGTCGCCATCGATGTGCTTCGCATACTTAGGATCCTTTGAAAGTAGCCCTGCCAGGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATT]
[+] EMBL BI503188 [TGCCGCGGAAATAGCGCCCAGACCGACAAAGGAGACCCACTGCGGTGTCAAGTATCGGAGAACGATCGGTAATGCTGCATTCGCTTCGTGCGTTATTATACTTTTGTTAAATCCCTGCACGGTTGACCAATCGGTGGCACGTGCCACCACGCCAATTAGAGCTGATGGAAACGCGAGGATCATGCAACCGAACATCGATGTTATCGACAAAGCGGTCGCCATCGATGTGCTTCGCATACTTAGGATCCTTTGAAAGTAGCCCTGCCAGGGTATACCGCCAAATACCAACAACAGCATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGCGTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCCAACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCACCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_166#0 ------------------------------------------------------------
consensus_166#1 TGCCGCGGAAATAGCGCCCAGACCGACAAAGGAGACCCACTGCGGTGTCAAGTATCGGAG 60
consensus_166#0 ------------------------------------------------------------
consensus_166#1 AACGATCGGTAATGCTGCATTCGCTTCGTGCGTTATTATACTTTTGTTAAATCCCTGCAC 120
consensus_166#0 ----------------------------------------------CGAAACGAGAGT-T 13
consensus_166#1 GGTTGACCAATCGGTGGCACGTGCCACCACGCCAATTAGAGCTGATGGAAACGCGAGGAT 180
****** *** *
consensus_166#0 CGCGCGTATCGAGTATCTATTCACGCTCGTGTAGATTCACGCGATTCATATTCACAGATC 73
consensus_166#1 CATGCA-ACCGAACATCGAT--GTTATCGACAAAGCGGTCGCCATCGATGTGCTTCG--C 235
* ** * *** *** ** *** * *** ** ** * * * *
consensus_166#0 AGAATTGAATATAATATTCGATATACCTGCCAAGGTATACCGCCAAATACCAACAACAGC 133
consensus_166#1 ATACTTAGGATCCTTTGAAAGTAGCCCTGCCAGGGTATACCGCCAAATACCAACAACAGC 295
* * ** * ** ******* ***************************
consensus_166#0 ATGCAATCCACCCACTCGCCAAGATCCTCGTTCTTGATCTCTCCGAGCCATTCGTGCGGC 193
consensus_166#1 ATGCAATCCACCCACTCGCCGAGATCCTCGTTCTTGATCTCCCCGAGCCATTCGTGCGGC 355
******************** ******************** ******************
consensus_166#0 GTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCC 253
consensus_166#1 GTTAGATTTTTCTCGAAGTTGACGGCGGGGTGGAGAACGGAAAATGGCGCGGCCAATCCC 415
************************************************************
consensus_166#0 AACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCA 313
consensus_166#1 AACCCGATCACGATGCATGCCAGCTGCAACGCATCGGTGCACGCGACGGAGTAAAGCCCA 475
************************************************************
consensus_166#0 CCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATTC 373
consensus_166#1 CCGAACACTGTGTATACGGCTGCCAAGAGGGCAGAGGCGACTATGCTGATGTCCGGATT- 534
***********************************************************
consensus_166#0 ACGCCAGCAACCACTGCCAACGAGCTTCCCAAAGCTCTCAACACGCCGCCACACCAGAAC 433
consensus_166#1 ------------------------------------------------------------
consensus_166#0 AGATCACTGAAGAGGGCAGGCAGGAACAAGAGACCCCCCACTCCGGCACCGTATCTCTCT 493
consensus_166#1 ------------------------------------------------------------
consensus_166#0 TGAAAAGGATCCAGCATGGTCACGTGCTCCGCTTTCCTCATTGGCCGTACGAATAACACC 553
consensus_166#1 ------------------------------------------------------------
consensus_166#0 GCGCCGAACAGTAGACTGAGGCTGTAACCGAAGGGCACTTGACACCAGGCCAATCCTTTG 613
consensus_166#1 ------------------------------------------------------------
consensus_166#0 GTAAACATCAATTCAGCGGTCCCGTTTATGTAGGCGCCACCGACCCACGTGGCGATCAAA 673
consensus_166#1 ------------------------------------------------------------
consensus_166#0 GTGAAGACGCCAAGAATCGGACCTAAGCCACGGTTAGCAAGTATCAAAGCGTCATGGCCA 733
consensus_166#1 ------------------------------------------------------------
consensus_166#0 TGGCGGGAT 742
consensus_166#1 ---------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |