These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1714#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [ATTTGTGTTGCTACTTGTGCCCTTGATTTTCCTACACTGTCTGCTTCTAGAAAAAAAATATATATATATACTTTGCACCGATATCTTCATTAGTAATTTTCTTGCCATCTACAATTGTAAACGCTCCAATACCTGGTAAAACTAGAGATTTTAAAATTTCTGTACCAAGGCCTGTAGCATTTATTACACAAATGTGTGCTCCTTCTAATGCAGCTTGACCATGATCACCCCATAACCTCAATTGTCTATCATATTTTCTATTTCTTTCAGATTGCTCTGGCGATTTTGGTGCTGGTGATGCCATAAGGATAGACTAATAAGAATAAAATAATGATATATATATATAATATTTTACTTTGGACAATGTAAAATATTACTTTCAATCAAAATTTTATTCACAACAACGCTTACTCTTATACTTATAAACTTGCACGAATCAACACAAATGAATCATTTTTGTAATATAAAATAAATTAAAATATTTTTATCGATCAAAACTAAATAGTATCTAAAATTATATAATAAAATTAAAAATTAATAAAAATAAAA] [+] EMBL BI505296 [ATTTGTGTTGCTACTTGTGCCCTTGATTTTCCTACACTGTCTGCTTCTAGAAAAAAAATATATATATATACTTTGCACCGATATCTTCATTAGTAATTTTCTTGCCATCTACAATTGTAAACGCTCCAATACCTGGTAAAACTAGAGATTTTAAAATTTCTGTACCAAGGCCTGTAGCATTTATTACACAAATGTGTGCTCCTTCTAATGCAGCTTGACCATGATCACCCCATAACCTCAATTGTCTATCATATTTTCTATTTCTTTCAGATTGCTCTGGCGATTTTGGTGCTGGTGATGCCATAAGGATAGACTAATAAGAATAAAATAATGATATATATATATAATATTTTACTTTGGACAATGTAAAATATTACTTTCAATCAAAATTTTATTCACAACAACGCTTACTCTTATACTTATAAACTTGCACGAATCAACACAAATGAATCATTTTTGTAATATAAAATAAATTAAAATATTTTTATCGATCAAAACTAAATAGTATCTAAAATTATATAATAAAATTAAAAATTAATAAAAATAAAA] consensusID : consensus_1714#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 494 fasta sequence [AGACAGTGTAGGAAAATCAAGGGCACAAGTAGCAACACAAATGCTTTTAGAGTTAAATTCAGATGTTAGAGGTGATTATATAGACGAGGAACCTGAACAAATTTTATGTAATAGTCCAGATTTTTTTAACAATTTTACCGTTGTCGTAGCCACTTCTTTATCAGAGAAATCTTTAATTCTTCTATCACAAAGACTTTGGGAATTAAATATACCTTTAATAGTATGTAGAAGTATAGGATTTATCGCATATATGAGAATTCAAGTGAAAGAACATACGGTTATAGAAACACATCCAGATAATGAAATTCCAGATTTACGTTTGGACAAGCCATTTGAGATATTAAAAAAAACATTTTGATTCCATAAATTTAGATGAACTTAGTTTTAAAGATCATTCTCATATACCGTACTTAGTTATACTATATAAATTTCTAGAAAAATGGACTTTACATAAAAAGGATTTACCTAAAACTTATAAAGAAAAACATCAATTA] [+] EMBL BI513433 [AGACAGTGTAGGAAAATCAAGGGCACAAGTAGCAACACAAATGCTTTTAGAGTTAAATTCAGATGTTAGAGGTGATTATATAGACGAGGAACCTGAACAAATTTTATGTAATAGTCCAGATTTTTTTAACAATTTTACCGTTGTCGTAGCCACTTCTTTATCAGAGAAATCTTTAATTCTTCTATCACAAAGACTTTGGGAATTAAATATACCTTTAATAGTATGTAGAAGTATAGGATTTATCGCATATATGAGAATTCAAGTGAAAGAACATACGGTTATAGAAACACATCCAGATAATGAAATTCCAGATTTACGTTTGGACAAGCCATTTGAGATATTAAAAAAAACATTTTGATTCCATAAATTTAGATGAACTTAGTTTTAAAGATCATTCTCATATACCGTACTTAGTTATACTATATAAATTTCTAGAAAAATGGACTTTACATAAAAAGGATTTACCTAAAACTTATAAAGAAAAACATCAATTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1714#0 ATTTGTGTTGCTACTTGTGCCCTTGATTTTCCTACACTGTCTGCTTCTAGAAAAAAAATA 60 consensus_1714#1 ----------------------------------------------------AGACAGTG 8 * * * * consensus_1714#0 TATATATATACTTTGCACCGATATCTTCATTAGTAATTTTCTTGCCATCTACAATTGT-- 118 consensus_1714#1 TAGGAAAATCAAGGGCACAAGTAGCAACACAAATGCTTTTAGAGTTAAATTCAGATGTTA 68 ** * ** **** ** * ** * * **** * * * ** *** consensus_1714#0 -AAACGCTCCAATACCTGGTAAAACTAGA-GATTTTAAAATTTCTGTACCAAGGCCTGTA 176 consensus_1714#1 GAGGTGATTATATAGACGAGGAACCTGAACAAATTTTATGTAATAGTCCAGATTTTTTTA 128 * * * *** * ** ** * * *** * * ** * * * ** consensus_1714#0 GCATTTATTACACAAATGTGTGCTCCTTCTAATGCAGCTTGACCATGATCACCCCATAAC 236 consensus_1714#1 ACAATTTTACCGTTGTCGTA-GCCACTTCTTTATCAGAGAAATCTTTA--ATTCTTCTAT 185 ** ** * * ** ** ***** *** * * * * * * * consensus_1714#0 CTCAATTGTCTATCATATTTTCTATTTCTTTCAGATTGCTCTGGCGATTTTGGTGCTGGT 296 consensus_1714#1 CACAAAGACTTTGGGAATTAAATATACCTTTAATAGTA-TGTAGAAGTATAGGATTTATC 244 * *** * *** *** **** * * * * * * * * ** * consensus_1714#0 GATGCCATAAGGATAGACTAATAAGAATAAAATAATGATATATATATATAATATTTTACT 356 consensus_1714#1 GCATATATGAGAAT---TCAAGTGAAAGAACATACGGTTATAGAAACACA----TCCAGA 297 * ** ** ** ** ** ** *** * **** * * * * * * consensus_1714#0 TTGGACAATGTAAAATATTACTTTCAATCAAA--ATTTTATTCACAACAACGCTTACTCT 414 consensus_1714#1 TAATGAAATTCCAGAT-TTACGTTTGGACAAGCCATTTGAGATATTAAAAAAAACATTTT 356 * *** * ** **** ** *** **** * * * ** * * * consensus_1714#0 TATACTTATAAACTTGCACGAATCAACACAAATGAATCATTTTTGTAATATAAAATAAAT 474 consensus_1714#1 GATTCC-ATAAATTTAGATGAACTTAGTTTTAAAGATCATTCTCATATACCGTACTTAGT 415 ** * ***** ** * *** * * ****** * ** * * * * consensus_1714#0 TAAAATATTTTTATCGATCAAAACTAAATAGTATCTAAAATTATATAATAAAATTAAAAA 534 consensus_1714#1 TATACTATATAAATTTCTAGAAA---AATGGACTTTACATAAAAAGGATTTACCTAAAAC 472 ** * *** * ** * *** *** * * ** * * * ** * ***** consensus_1714#0 TTAATAAAAATAAAA------- 549 consensus_1714#1 TTATAAAGAAAAACATCAATTA 494 *** ** ** ** * |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |