These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1849#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 516 fasta sequence [GACTGCTTGCATTTTCATGAGAATTTTTACTTCGTTACTACGTTTCGAGGTTTGTTGCATCGCATTTTGTATCATTTTGTGGATTCCTCGTCGTTGATAATTATTTATTTCGTTGACCTCTTTTCATTCTATTACGAATATAATAAACGTCGTTAACAATGTATTCGACGTTTATTTAATTGGGAAGATTTATATTTATAAACGATTTTTCTTTTATATATATATATAAAACAACGCTCCATTTTAATCTAATTTCACAGCAACCTCGACTGAGTTTCGTTTCGAAATCTGAAATAAGCAAGTAATAACAAAAGATTGGCCATCTCTTTTTAGTTGTACATATTAGGCTATTATGATTATGTATATTATTTTTAAATTATTCTCACTTTTATCTCGTTGTACGTAGCTTTGCTCTTTTTTTTTTTCCTCTTTTATATATATATATATATAAGAAGCTGCTAGAAAATATTTAATTTTTAGCGAATCCTTGTATAGGTCAGTGAATATTGAAATAAC] [+] EMBL BI513304 [GACTGCTTGCATTTTCATGAGAATTTTTACTTCGTTACTACGTTTCGAGGTTTGTTGCATCGCATTTTGTATCATTTTGTGGATTCCTCGTCGTTGATAATTATTTATTTCGTTGACCTCTTTTCATTCTATTACGAATATAATAAACGTCGTTAACAATGTATTCGACGTTTATTTAATTGGGAAGATTTATATTTATAAACGATTTTTCTTTTATATATATATATAAAACAACGCTCCATTTTAATCTAATTTCACAGCAACCTCGACTGAGTTTCGTTTCGAAATCTGAAATAAGCAAGTAATAACAAAAGATTGGCCATCTCTTTTTAGTTGTACATATTAGGCTATTATGATTATGTATATTATTTTTAAATTATTCTCACTTTTATCTCGTTGTACGTAGCTTTGCTCTTTTTTTTTTTCCTCTTTTATATATATATATATATAAGAAGCTGCTAGAAAATATTTAATTTTTAGCGAATCCTTGTATAGGTCAGTGAATATTGAAATAAC] consensusID : consensus_1849#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 341 fasta sequence [GTTGCTTTTTTTTTTTTTTTTTTTATGATATATATATATAAGAAGCTGCTAGAAAATATTTAATTTTTAGCGAATCCTTGTATAGGTCAGTGAATATTGAAATAACATAATCTATGTTTTCTAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAGATAAATTTTAAAAGGAGGAACGCAATTCGAACTNGAAAGAAACTGGAGAAAGTTCCAGATTTATTTTCAACGATTATGTTATCTCATTATTCGAAGGATAGNACGAAAGATGCTAAGCGTCGTTATATTAAAAATGTTACAAATCAAGTTGGGTTTCTCTAACCTTATGTATCCGAGCGCGATCGT] [+] EMBL BI504829 [GTTGCTTTTTTTTTTTTTTTTTTTATGATATATATATATAAGAAGCTGCTAGAAAATATTTAATTTTTAGCGAATCCTTGTATAGGTCAGTGAATATTGAAATAACATAATCTATGTTTTCTAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAGATAAATTTTAAAAGGAGGAACGCAATTCGAACTNGAAAGAAACTGGAGAAAGTTCCAGATTTATTTTCAACGATTATGTTATCTCATTATTCGAAGGATAGNACGAAAGATGCTAAGCGTCGTTATATTAAAAATGTTACAAATCAAGTTGGGTTTCTCTAACCTTATGTATCCGAGCGCGATCGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1849#0 GACTGCTTGCATTTTCATGAGAATTTTTACTTCGTTACTACGTTTCGAGGTTTGTTGCAT 60 consensus_1849#1 ------------------------------------------------------------ consensus_1849#0 CGCATTTTGTATCATTTTGTGGATTCCTCGTCGTTGATAATTATTTATTTCGTTGACCTC 120 consensus_1849#1 ------------------------------------------GTTGCTTTTTTT--TTTT 16 ** *** ** * consensus_1849#0 TTTTCATTCTATTACGAATATAATAAACGTCGTTAACAATGTATTCGACGTTTATTTAAT 180 consensus_1849#1 TTTTTTTTATGATATATATATATAAGAAGCTGCTAG-AAAATATTTAATTTTTAGCGAAT 75 **** ** * ** ***** * * * * ** ** **** * **** *** consensus_1849#0 ---TGGGAAGATTTATATTTATAAACGATTTTTCTTTTATATATATATATAAAACAACGC 237 consensus_1849#1 CCTTGTATAGGTCAGTGAATATTGAAATAACATAATCTATGTTT-TCTAAAAAAAAAAAA 134 ** ** * * *** * * * *** * * * ** **** ** consensus_1849#0 TCCATTTTAATCTAATTTCACAGCAACCTCGACTGAGTTTCGTTTCGAAATCTGAAATAA 297 consensus_1849#1 AAAAAAAAAAAGGAAAAAAAGATAAATTTTAAAAGGA----GGAACGCAATTCGAACTNG 190 * ** ** * * ** * * * * ** *** *** * consensus_1849#0 GCAAGTAATAACAAAAGATTGGCCATCTCTTTTTAGTTGTACATATTAGGCTATTATGAT 357 consensus_1849#1 A-AAGAAACTGGAGAAAGTTCCAGATTTATTTTCAACGAT-TATGTTATCTCATTATT-C 247 *** ** * ** ** ** * **** * * ** *** ***** consensus_1849#0 TATGTATATTATTTTTAAATTATTCTCACTTTTATCTCGTTGTACGTAGCTTTGCTCTTT 417 consensus_1849#1 GAAGGATAGNAC----GAAAGATGCTAAGCGTCGTTATATTAAAAATGTTACAAATCAAG 303 * * *** * ** ** ** * * * ** * * ** consensus_1849#0 TTTTTTTTCCTCTTTTATATATATATATATATAAGAAGCTGCTAGAAAATATTTAATTTT 477 consensus_1849#1 TTGGGTTTCTCTAACCTTATGTATCCGAGCGCGATCGT---------------------- 341 ** **** *** *** * consensus_1849#0 TAGCGAATCCTTGTATAGGTCAGTGAATATTGAAATAAC 516 consensus_1849#1 --------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |