These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1858#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [AGTTGTCGGGGAAGTATGGAAGAAGAGAAAAAAAAAAGGAGCAAAAAAATAAATAATAATAATAATAATAATATTAATATTAATAATAATAATAATAATAATAATAATAATAATAAAAACATGAATTATAATAGAGTAATGTATTTTATGACGGGTTTTAATAGCGGTATTAATACGATATTAATAGCGATATTTAGCCGTAACTGATAATAAAGACACTATTTGAATGTGAAATTATTAGACGATAATGAGACACAGGATGTAACACAGTGGTAATAAACTGTATGGTAATAAACTACTATATAAGGTTTAAACGATTAGGCATTAAATCGTCGAAATGGGAAAGAAAATGGACGAGAACAAGTAAGATATTAAGATAATGATGGGGGAAAAAAAAAAAAAAAGAAAACGAATATCGAAACAATGAAAATCTATGGACTTTTTTTACCAAAGAATTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTGTATACGTACGATGGGATT] [+] EMBL BI504805 [AGTTGTCGGGGAAGTATGGAAGAAGAGAAAAAAAAAAGGAGCAAAAAAATAAATAATAATAATAATAATAATATTAATATTAATAATAATAATAATAATAATAATAATAATAATAAAAACATGAATTATAATAGAGTAATGTATTTTATGACGGGTTTTAATAGCGGTATTAATACGATATTAATAGCGATATTTAGCCGTAACTGATAATAAAGACACTATTTGAATGTGAAATTATTAGACGATAATGAGACACAGGATGTAACACAGTGGTAATAAACTGTATGGTAATAAACTACTATATAAGGTTTAAACGATTAGGCATTAAATCGTCGAAATGGGAAAGAAAATGGACGAGAACAAGTAAGATATTAAGATAATGATGGGGGAAAAAAAAAAAAAAAGAAAACGAATATCGAAACAATGAAAATCTATGGACTTTTTTTACCAAAGAATTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTGTATACGTACGATGGGATT] consensusID : consensus_1858#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence [TTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTNTATACGTACGATGGGATTAAATCACTTGGAGCGAGAGAATTTCGAAACTTCGATATACGAAATTTAATCCTTGTGCCGATAAAATACGAATAATACTTCAGAGCATCGCACACGCTATTAAGGAAAGAAAAAGGGAAGNACGTTTAATTATAATAAACCCCGATGCAAGATCTAAGGTACTATAAATCTCCAATTTCCTTCTATCTAATAATAAAAAGTCAAAACTCGTCGAGGAGTTTTTTGTTAGCAAGGGATTAAACTTCGATGATTCTCGCCAAATGATTTTTGATGCTTCCAGTATATTATGGAACGATTCNNNGATAAAATACTGTCGAATTTACGGGAACGTTCTCCGCTAAAAAAGAACAAATTTAAAATGTAAATGTTAAATGTAATATC] [+] EMBL BI515882 [TTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTNTATACGTACGATGGGATTAAATCACTTGGAGCGAGAGAATTTCGAAACTTCGATATACGAAATTTAATCCTTGTGCCGATAAAATACGAATAATACTTCAGAGCATCGCACACGCTATTAAGGAAAGAAAAAGGGAAGNACGTTTAATTATAATAAACCCCGATGCAAGATCTAAGGTACTATAAATCTCCAATTTCCTTCTATCTAATAATAAAAAGTCAAAACTCGTCGAGGAGTTTTTTGTTAGCAAGGGATTAAACTTCGATGATTCTCGCCAAATGATTTTTGATGCTTCCAGTATATTATGGAACGATTCNNNGATAAAATACTGTCGAATTTACGGGAACGTTCTCCGCTAAAAAAGAACAAATTTAAAATGTAAATGTTAAATGTAATATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1858#0 AGTTGTCGGGGAAGTATGGAAGAAGAGAAAAAAAAAAGGAGCAAAAAAATAAATAATAAT 60 consensus_1858#1 ---------------------TTTTTTCACAAAGAGAGATTTCAATATACACGCGTGCAC 39 * *** * ** ** * * * * consensus_1858#0 AATAATAATAATATTAATATTAATAATAATAATAATA-ATAATAATAATAATAATAAAA- 118 consensus_1858#1 GCGTTTTCCTTCACTTGTTTCTGTTCTTTTATTCTTNTATACGTACGATGGGATTAAATC 99 * * * * * * * ** * * *** * ** * **** consensus_1858#0 ACATGAATTATAATAGAGTAATGTATTTTATG-ACGGGTTTTAATAGCGGTATTAATACG 177 consensus_1858#1 ACTTGGAGCGAGAGAATTTCGAAACTTCGATATACGAAATTTAATCCTTGTGCCGATAAA 159 ** ** * * * * ** ** *** ****** ** *** consensus_1858#0 ATATTAATAGCGATATTTAGC--CGTAACTGATAATAAAGACACTATTTGAATGTGAAAT 235 consensus_1858#1 ATACGAATAATACTTCAGAGCATCGCACACGCTATTAAGGAAAGAAAAAGGGAAGNACGT 219 *** **** * *** ** * * ** *** ** * * * * * consensus_1858#0 T--ATTAGACGATAATGAGACACAGGATGTAACACAGTGGTAATAAACTGTATGGTAATA 293 consensus_1858#1 TTAATTATAATAAACCCCGATGCAAGATCTAAGGTACTATAAATCTCCAATTTCCTTCTA 279 * **** * * * ** ** *** *** * * *** * * * * ** consensus_1858#0 AACTACTATATAAGGTTTAAACG-ATTAGGCATTAAATCGTCGAAATGGGAAAGAAAATG 352 consensus_1858#1 TCTAATAATAAAAAGTCAAAACTCGTCGAGGAGTTTTTTGTTAGCAAGGGATTAAACTTC 339 * *** ** ** **** * * * * * ** * **** ** * consensus_1858#0 GACGAG----AACAAGTAAGATATTAAGATAATGATGGGGGAAAAAAAAAAAAAAAGA-A 407 consensus_1858#1 GATGATTCTCGCCAAATGATTTTTGATGCTTCCAGTATATTATGGAACGATTCNNNGATA 399 ** ** *** * * * * * * * * * ** * ** * consensus_1858#0 AACGAATATCGAAACAATGAAAATCTATGGACTTTTTTTACCAAAGAATTTTTTCACAAA 467 consensus_1858#1 AAATACTGTCGAATTTACGGGAAC-----GTTCTCCGCTAAAAAAGAACAAATTTAAAAT 454 ** * * ***** * * ** * * ** ****** ** * ** consensus_1858#0 GAGAGATTTCAATATACACGCGTGCACGCGTTTTCCTTCACTTGTTTCTGTTCTTTTATT 527 consensus_1858#1 GTAAATGTTAAATGTAATATC--------------------------------------- 475 * * ** *** ** * consensus_1858#0 CTTGTATACGTACGATGGGATT 549 consensus_1858#1 ---------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |