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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_187#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 571 fasta sequence
[TTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGAATGGCACGTGGACAACAGAAAATTCAATCACAAGCCAAAGCAGCTGAGAAAGCTGCAAAAGTAAAAAAACAACAAGGACATAGTGCTAATGAGCAAAAAAAGGCTGCACAGAAAGCTTTAGTTCATGTGTGCATAGTTTGTAAGGCACAAATGCCAGATCCAAAGACGTATAAACAACATTTTGAGAATAAACATCCTAAGAATGATTTACCAGAAGATTTAAAAAATATATGAGAGTAACATGTTGCACAAGCATGCAGGTTGGGATGGAGAGAGCAACAAAAAAATTATTACAAATGACAAAGTGATATAGTTCAACATTCAACTATTAAATAGTCACAAACAAGAAAAATAAATTAAATCTTGTTAGTGTTTAAAATGAACTATCGCACAGTTAACAATTGAATTTTTGTGCACAGCTCCAAATTGTAATATTATTGATAATTCATTTGTAAAACAAAATTGTTCATTTTTTTCCAAAGATAC]
[+] EMBL BI514056 [TTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGAATGGCACGTGGACAACAGAAAATTCAATCACAAGCCAAAGCAGCTGAGAAAGCTGCAAAAGTAAAAAAACAACAAGGACATAGTGCTAATGAGCAAAAAAAGGCTGCACAGAAAGCTTTAGTTCATGTGTGCATAGTTTGTAAGGCACAAATGCCAGATCCAAAGACGTATAAACAACATTTTGAGAATAAACATCCTAAGAATGATTTACCAGAAGATTTAAAAAATATATGAGAGTAACATGTTGCACAAGCATGCAGGTTGGGATGGAGAGAGCAACAAAAAAATTATTACAAATGACAAAGTGATATAGTTCAACATTCAACTATTAAATAGTCACAAACAAGAAAAATAAATTAAATCTTGTTAGTGTTTAAAATGAACTATCGCACAGTTAACAATTGAATTTTTGTGCACAGCTCCAAATTGTAATATTATTGATAATTCA ]
[+] EMBL BI514106 [TTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGAATGGCACGTGGACAACAGAAAATTCAATCACAAGCCAAAGCAGCTGAGAAAGCTGCAAAAGTAAAAAAACAACAAGGACATAGTGCTAATGAGCAAAAAAAGGCTGCACAGAAAGCTTTAGTTCATGTGTGCATAGTTTGTAAGGCACAAATGCCAGATCCAAAGACGTATAAACAACATTTTGAGAATAAACATCCTAAGAATGATTTACCAGAAGATTTAAAAAATATATGAGAGTAACATGTTGCACAAGCATGCAGGTTGGGATGGAGAGAGCAACAAAAAAATTATTACAAATGACAAAGTGATATAGTTCAACATTCAACTATTAAATAGTCACAAACAAGAAA ]
[+] EMBL BI514464 [ CCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGAATGGCACGTGGACAACAGAAAATTCAATCACAAGCCAAAGCAGCTGAGAAAGCTGCAAAAGTAAAAAAACAACAAGGACATAGTGCTAATGAGCAAAAAAAGGCTGCACAGAAAGCTTTAGTTCATGTGTGCATAGTTTGTAAGGCACAAATGCCAGATCCAAAGACGTATAAACAACATTTTGAGAATAAACATCCTAAGAATGATTTACCAGAAGATTTAAAAAATATATGAGAGTAACATGTTGCACAAGCATGCAGGTTGGGATGGAGAGAGCAACAAAAAAATTATTACAAATGACAAAGTGATATAGTTCAACATTCAACTATTAAATAGTCACAAACAAGAAAAATAAATTAAATCTTGTTAGTGTTTAAAATGAACTATCGCACAGTTAACAATTGAATTTTTGTGCACAGCTCCAAATTGTAATATTATTGATAATTCATTTGTAAAACAAAATTGTTCATTTTTTTCCAAAGATAC]
[+] EMBL BI511671 [ GCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGAATGGCACGTGGACAACAGAAAATTCAATCACAAGCCAAAGCAGCTGAGAAAGCTGCAAAAGTAAAAAAACAACAAGGACATAGTGCTAATGAGCAAAAAAAGGCTGCACAGAAAGCTTTAGTTCATGTGTGCATAGTTTGTAAGGCACAAATGCCAGATCCAAAGACGTATAAACAACATTTTGAGAATAAACATCCTAAGAATGATTTACCAGAAGATTTAAAAAATATATGAGAGTAACATGTTGCACAAGCATGCAGGTTGGGATGGAGAGAGCAACAAAAAAATTATTACAAATGACAAAGTGATATAGTTCAACATTCAACTATTAAATAGTCACAAACAAGAAAAATAAATTAAATCTTGTTAGTGTTTAAAATGAACTATCGCACAGTTAACAATTGAATTTTTGTGCACAGCTCCAAATTGTAATATTATTGATAATTCATTTGTAAAACAA ]
consensusID : consensus_187#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 551 fasta sequence
[TTATTTGAAAGGCAGTACTTCACGTACGGATGCTCGAAGATTGCTCGTTCTAATAGATGTGCTGTGAGCACTGCTTTCGATTACTCCGTTTTCTTTGCAAATCATTTTCTTAATTAATTTCAACTATACAACAAAATACAGGAACAAAATTTTTTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGGTGAGCGACCTATTTTTTGCAAACTACTTTGTCTAAAAAAATAATTTTTTGCTCTCGCTTATTGTAAATTTCTTCGAAAATTTAATTTGACTATTTTGTATTGCTGTTTTTTGCTTACACACGCTTGATAATATAAATTAAACCAATAATATCGCGGGCAATCTTTGGCACCTCAGTCACCTATTTTATAGGTTGGGTTTATAATCTCGGCGAAGTGAAAGTACGTAATAATAGTCTATTAAAGAGAAAGGATTGAAGATTATACAGTCGAATGAAGATGCACGTTGTCAACGTGCATCTTCATTCAAAAAAAA]
[+] EMBL BI513146 [TTATTTGAAAGGCAGTACTTCACGTACGGATGCTCGAAGATTGCTCGTTCTAATAGATGTGCTGTGAGCACTGCTTTCGATTACTCCGTTTTCTTTGCAAATCATTTTCTTAATTAATTTCAACTATACAACAAAATACAGGAACAAAATTTTTTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGGTGAGCGACCTATTTTTTGCAAACTACTTTGTCTAAAAAAATAATTTTTTGCTCTCGCTTATTGTAAATTTCTTCGAAAATTTAATTTGACTATTTTGTATTGCTGTTTTTTGCTTACACACGCTTGATAATATAAATTAAACCAATAATATCGCGGGCAATCTTTGGCACCTCAGTCACCTATTTTATAGGTTGGGTTTATAATCTCGGCGAAGTGAAAGTACGTAATAATAGTCTATTAAAGAGAAAGGATTGAAGATTATACAGTCGAATGAAGATGCACGTTGTCAACGTGCATCTTCATTCAAAAAAAA]
[+] EMBL BI513187 [TTATTTGAAAGGCAGTACTTCACGTACGGATGCTCGAAGATTGCTCGTTCTAATAGATGTGCTGTGAGCACTGCTTTCGATTACTCCGTTTTCTTTGCAAATCATTTTCTTAATTAATTTCAACTATACAACAAAATACAGGAACAAAATTTTTTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGGTGAGCGACCTATTTTTTGCAAACTACTTTGTCTAAAAAAATAATTTTTTGCTCTCGCTTATTGTAAATTTCTTCGAAAATTTAATTTGACTATTTTGTATTGCTGTTTTTTGCTTACACACGCTTGATAATATAAATTAAACCAATAATATCGCGGGCAATCTTTGGCACCTCAGTCACCTATTTTATAGGTTGGGTTTATAATCTCGGCGAAGTGAAAGTACGTAATAATAGTCTATTAAAGAGAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_187#0 -------------TTTGTTTCTGTTGTGAATAATTAAGCCCCGGATCATCGAAATAGCAA 47
consensus_187#1 TTATTTGAAAGGCAGTACTTCACGTACGGATGCTCGAAGATTGC-TCGTTCTAATAGATG 59
* *** * * ** * * * ** * *****
consensus_187#0 ----GAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGAATGGCACGTGGACAACAG 103
consensus_187#1 TGCTGTGAGCACTGCTTTCGATTACTCCGTTTTCTTTGCAAATCATTTTCTTAATTAATT 119
* ** ****** * *** * * ** * * * *
consensus_187#0 AAAATTCAATCACAAGCCAAAGCAGCTGAGAAA----GCTGCAAAAGTAAAAAAACAACA 159
consensus_187#1 TCAACTATACAACAAAATACAGGAACAAAATTTTTTTGTTTCTGTTGTGAATAATTAAGC 179
** * * **** * ** * * * * * * ** ** ** **
consensus_187#0 AGGACATAGTGCTAATGAGCAAAAAAAGGCTGCAC--AGAAAGCTTTAGTTC---ATGTG 214
consensus_187#1 CCCGGATCAT-CGAAATAGCAAGAGAATCTTGCTTTTAAATACGTTTATCTTGGGACAGG 238
** * * ** ***** * ** *** * * * **** * * *
consensus_187#0 TGCATAGTTTGTAAGGCACAAA-TGCCAGATCCAAAGACGTATAAACAACATTTTGAGAA 273
consensus_187#1 TGAGCGACCTATTTTTTGCAAACTACTTTGTCTAAAAA------AATAATTTTTTGCTCT 292
** * * **** * * ** *** * ** ** *****
consensus_187#0 TAAACATCCTAAGAATGATTTACCAGAAGATTTAAAAAATATATGAGAGTAACATGTTGC 333
consensus_187#1 CGCTTATTGTAAATTTCTTCGAAAATTTAATTTGACTATTTTGT-ATTGCTGTTTTTTGC 351
** *** * * * * **** * * * * * * * * ****
consensus_187#0 ACAAGCATGCAGGTTGGGATGGAG-AGAGCAACAAAA----AAATTATTACAAATGACAA 388
consensus_187#1 TTACACACGCTTGATAATATAAATTAAACCAATAATATCGCGGGCAATCTTTGGCACCTC 411
* ** ** * * ** * * * *** ** * ** *
consensus_187#0 AGTGATATAGTTCAACATTCAACTATTAAATAGTCACAAACAAGAAAAATAAATTAAATC 448
consensus_187#1 AGTCACCTATTTTATAGGTTGGGTTT---ATAATCTCGGCGAAGTGAAAGTACGTAATAA 468
*** * ** ** * * * * *** ** * *** *** * ***
consensus_187#0 TTGTTAGTGTTTAAAATGAACTATCGCACAGTTAACAATTGAATTTTTGTGCACAGCTCC 508
consensus_187#1 TAGTC--TATTAAAGAGAAAGGATTGAAGATTATACAGTCGAATGAAGATGCACGTTGTC 526
* ** * ** ** * ** ** * * * * *** * **** ***** *
consensus_187#0 AAATTGTAATATTATTGATAATTCATTTGTAAAACAAAATTGTTCATTTTTTTCCAAAGA 568
consensus_187#1 AACGTGCATCTTCATTCAAAAAAAA----------------------------------- 551
** ** * * *** * ** *
consensus_187#0 TAC 571
consensus_187#1 ---
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |