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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1894#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 597 fasta sequence
[ACATGAGCATTTTAAATACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGATATAAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCATGGTTTCAGCATCTTTTTGCAATAGAAAAAGAACAAAATATAAAACCTTTATTGAAATATGTGATTTTTAAAGATGATACTTATAGAATTAGATGCGTACCTGTGAAGCCTGATAGTTTTATATGCAGGTTATTTTTACCAGAATCTTGGGAAGGTTTAAAAAATGAAGCTCTGGTAAATGTCTGCGGAATCGAAGGTGCTACTTTTGTACATTCTGGTCGATTTATTGGCGGAAATCGAATGAGAGAAGGAATATTAATGA]
[+] EMBL BI508093 [ACATGAGCATTTTAAATACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGATATAAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCATGGTTTCAGCATCTTTTTGCAATAGAAAAAGAACAAAATATAAAACCTTTATTGAAATATGTGATTTTTAAAGATGATACTTATAGAATTAGATGCGTACCTGTGAAGCCTGATAGTTTTATATGCAGGTTATTTTTACCAGAATCTTGGGAAGGTTTAAAAAATGAAGCTCTGGTAAATGTCTGCGGAATCGAAGGTGCTACTTTTGTACATTCTGGTCGATTTATTGGCGGAAATCGAATGAGAGAAGGAATATTAATGA]
consensusID : consensus_1894#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 554 fasta sequence
[TACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGAGATTTTAATGAATCTGTAAGTACGATTATTAAGAAACCAGGTCATGATTGGAAAACAAAACTAAGTAGTGCTGGTTTAATATATTGTCATTTTGGTCATGAAATTATCAAGGAATTAGTTCCACAAGCAAGCGATGCTGACATAGAAATAATTTTTAAACATATTTATAATACATTCATTCAAGAAATTGATAGTATAGATAATGGAATTTCTATATGTAGTGAAAATACTAAATATCAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCAT]
[+] EMBL BI504717 [TACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTTGCAAGCATCGTTATGACCATCATATGAGAGATTTTAATGAATCTGTAAGTACGATTATTAAGAAACCAGGTCATGATTGGAAAACAAAACTAAGTAGTGCTGGTTTAATATATTGTCATTTTGGTCATGAAATTATCAAGGAATTAGTTCCACAAGCAAGCGATGCTGACATAGAAATAATTTTTAAACATATTTATAATACATTCATTCAAGAAATTGATAGTATAGATAATGGAATTTCTATATGTAGTGAAAATACTAAATATCAGATCGTAACAGATTTATCTTCTCGTGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATGTTTGGTTACCAGCTAGATCTATCGTAGAAGAAGCTGTTGCAAAACGCTTTGAAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTGTACCAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1894#0 ACATGAGCATTTTAAATACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTT 60
consensus_1894#1 ----------------TACTTGTGATATTGTGGTCGATGTTGGTGAAGAATATAATCCTT 44
********************************************
consensus_1894#0 GCAAGCATCGTTATGACCATCATATGAGATATAAGATCGTAACAGATTTATCTTCTCG-- 118
consensus_1894#1 GCAAGCATCGTTATGACCATCATATGAGA-----GATTTTAATGAATCTGTAAGTACGAT 99
***************************** *** *** ** * * **
consensus_1894#0 TGTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCT-TAATCCTAATACTCAATTTT 177
consensus_1894#1 TATTAAGAAACCAGGTC-ATGATTGGAAAACAAAACTAAGTAGTGCTGGTTTAATATATT 158
* ***** * ** * ** * * * **** * ** * ** * ** **
consensus_1894#0 TAAAAGCAATGGAATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAG-CAAAT 236
consensus_1894#1 GTCATTTTGGTCATGAAATTATCAAGGAATTAGTTCCACAAGCAAGCGATGCTGACATAG 218
* * ** * * * ** ** ** * *** ** **** * ** *
consensus_1894#0 GTTTGGTTACCAGCTAGATCTATCGTAGA--------AGAAGCTGTTGCAAAACGCTTTG 288
consensus_1894#1 AAATAATTTTTAAACATATTTATAATACATTCATTCAAGAAATTGATAGTATAGATAATG 278
* ** * * ** *** ** * **** ** * * * **
consensus_1894#0 AAGTTGATCCTAGCGGAGAAATTATAGAATTATCACAGTGTG-TACCATGGTTTCAGCAT 347
consensus_1894#1 GAATTTCTATATGTAGTGAAAATACTAAAT-ATCAGATCGTAACAGATTTATCTTCTCGT 337
* ** * * * **** ** *** **** * ** * * * * * *
consensus_1894#0 CTTTTTGCAATAGAAAAAGAACAAAATAT--AAAACCTTTATTGAAATATGTGATTTTTA 405
consensus_1894#1 GTTAAGTTTTTAAATCCACCATGGAATAGCAAAGATCTTAATCCTAATACTCAATTTTTA 397
** ** * * * **** ** * *** ** **** *******
consensus_1894#0 AAGATGATACTTATAGAATTAGATGCGTACCTGTGAAGCCTGATAGTTTTATATGCAGGT 465
consensus_1894#1 AAAGCAATGG--AATTAACTGGCCAAGATTTTGTCCAACATATAAATTATGCAGCAAATG 455
** ** * ** * * * *** * * * * ** * * *
consensus_1894#0 TATTTTTACCAGAATCTTGGGAAGGTTTAAAAAATGAAGCTCTGGTAAATGTCTGCGGAA 525
consensus_1894#1 TTTGGTTACCAG---CTAG---ATCTATCGTAGAAGAAGCTGTTGCAAAACGCT------ 503
* * ******* ** * * * * * * ****** * * *** **
consensus_1894#0 TCGAAGGTGCTACTTTTGTACATTCTGGTCGATTTATTGGCGGAAATCGAATGAGAGAAG 585
consensus_1894#1 TTGAAGTTGATCCTAGCGGAGAAATTA-TAGAATTATCACAGTGTGTACCAT-------- 554
* **** ** * ** * * * * * ** **** * * **
consensus_1894#0 GAATATTAATGA 597
consensus_1894#1 ------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |