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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 616 fasta sequence
[ACGTCTTTTCTGTTTTTTTTTCAATTTCAAAGAATACCAATAGTCACATGGCGATCACTTCGGTCAACTCACAATCGGTAACGGTTCTTATACGCACTTGGATTTTCATGATAATCTTTTGTTTCGCGGGTGGTGTAGCAGGTTCTTGTTTAAGCTATGGACATTCATGTTGGGGAGCTCATGGTAAACGCAATGGAGGACATAACAATGGATATTTAGTGCCATCCAAGACAATAAATGAACAAGGTGTACCATATCTTACAAAAGATCAATTCATACTTTCCCGTTTGATTGGTCGACCATTAGTATCTAACAAATATAAAGGAAGATGGGACAGGCTTTTCAAAATAAAAGCTAGTTTTCCAGAGCATTGGAATGACGATGAACTTGATACCCATCTTATTAACAATGAACCTATTCGAATATGGCAGAATACGACAATATCAACGACGAAAGGAAAGAAATTCCAGAAATATTACTGATATCGAATAATGAGAATAATCATCATGACAGTAAACCACAAAATGCAGAGTTATTCAAATTTTTGAGTAACACAAATGATAATTTCGAATAAGAGAAAGGAATATTGCTATCACATATAATGTAAAATAGAAAT]
[+] EMBL BI505557 [ACGTCTTTTCTGTTTTTTTTTCAATTTCAAAGAATACCAATAGTCACATGGCGATCACTTCGGTCAACTCACAATCGGTAACGGTTCTTATACGCACTTGGATTTTCATGATAATCTTTTGTTTCGCGGGTGGTGTAGCAGGTTCTTGTTTAAGCTATGGACATTCATGTTGGGGAGCTCATGGTAAACGCAATGGAGGACATAACAATGGATATTTAGTGCCATCCAAGACAATAAATGAACAAGGTGTACCATATCTTACAAAAGATCAATTCATACTTTCCCGTTTGATTGGTCGACCATTAGTATCTAACAAATATAAAGGAAGATGGGACAGGCTTTTCAAAATAAAAGCTAGTTTTCCAGAGCATTGGAATGACGATGAACTTGATACCCATCTTATTAACAATGAACCTATTCGAATATGGCAGAATACGACAATATCAACGACGAAAGGAAAGAAATTCCAGAAATATTACTGATATCGAATAATGAGAATAATCATCATGACAGTAAACCACAAAATGCAGAGTTATTCAAATTTTTGAGTAACACAAATGATAATTTCGAATAAGAGAAAGGAATATTGCTATCACATATAATGTAAAATAGAAAT]
consensusID : consensus_1902#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[TCACAATCGGTGACGGTTCTTATACGCACTTGGATTTTCATGATAATCTTTTGTTTCGCGGGTGGTGTAGCAGGTTCTTGTTTAAGCTATGGACATTCATGTTGGGGAGCTCATGGTAAACGCAATGGAGGACATAACAATGGATATTTAGTGCCATCCAAGACAATAAATGAACAAGGTGTACCATATCTTACAAAAGATCAATTCATACTTTCCCGTTTGATTGGTCGACCATTAGTATCTAACAAATATAAAGGAAGATGGGACAGGCTTTTCAAAATAAAAGCTAGTTTTCCAGAGCATTGGAATGACGATGAACTTGATACCCATCTTATTAACAATGAACCTATTCGAGATCAAAACAACAATGAAAACATGAACCAGAATAAAAGAAAACATATTGAAAATGTGCAGAATATGGCAGAATACGACAATATCAACGACGAAAGGAAAGAAATTCCAGAAATATTACTGATATCGAATAATGAGAATAATCATCATGACAGTAAACCACAAAATGCAGAGTTATTCAAATTTTTGAGTAACACAAATGATAATTTCGAATANGAGAAAGGAATATTGCTATCACATATAATGTAAAATAGAA]
[+] EMBL BI504696 [TCACAATCGGTGACGGTTCTTATACGCACTTGGATTTTCATGATAATCTTTTGTTTCGCGGGTGGTGTAGCAGGTTCTTGTTTAAGCTATGGACATTCATGTTGGGGAGCTCATGGTAAACGCAATGGAGGACATAACAATGGATATTTAGTGCCATCCAAGACAATAAATGAACAAGGTGTACCATATCTTACAAAAGATCAATTCATACTTTCCCGTTTGATTGGTCGACCATTAGTATCTAACAAATATAAAGGAAGATGGGACAGGCTTTTCAAAATAAAAGCTAGTTTTCCAGAGCATTGGAATGACGATGAACTTGATACCCATCTTATTAACAATGAACCTATTCGAGATCAAAACAACAATGAAAACATGAACCAGAATAAAAGAAAACATATTGAAAATGTGCAGAATATGGCAGAATACGACAATATCAACGACGAAAGGAAAGAAATTCCAGAAATATTACTGATATCGAATAATGAGAATAATCATCATGACAGTAAACCACAAAATGCAGAGTTATTCAAATTTTTGAGTAACACAAATGATAATTTCGAATANGAGAAAGGAATATTGCTATCACATATAATGTAAAATAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1902#0 ACGTCTTTTCTGTTTTTTTTTCAATTTCAAAGAATACCAATAGTCACATGGCGATCACTT 60
consensus_1902#1 ------------------------------------------------------------
consensus_1902#0 CGGTCAACTCACAATCGGTAACGGTTCTTATACGCACTTGGATTTTCATGATAATCTTTT 120
consensus_1902#1 --------TCACAATCGGTGACGGTTCTTATACGCACTTGGATTTTCATGATAATCTTTT 52
*********** ****************************************
consensus_1902#0 GTTTCGCGGGTGGTGTAGCAGGTTCTTGTTTAAGCTATGGACATTCATGTTGGGGAGCTC 180
consensus_1902#1 GTTTCGCGGGTGGTGTAGCAGGTTCTTGTTTAAGCTATGGACATTCATGTTGGGGAGCTC 112
************************************************************
consensus_1902#0 ATGGTAAACGCAATGGAGGACATAACAATGGATATTTAGTGCCATCCAAGACAATAAATG 240
consensus_1902#1 ATGGTAAACGCAATGGAGGACATAACAATGGATATTTAGTGCCATCCAAGACAATAAATG 172
************************************************************
consensus_1902#0 AACAAGGTGTACCATATCTTACAAAAGATCAATTCATACTTTCCCGTTTGATTGGTCGAC 300
consensus_1902#1 AACAAGGTGTACCATATCTTACAAAAGATCAATTCATACTTTCCCGTTTGATTGGTCGAC 232
************************************************************
consensus_1902#0 CATTAGTATCTAACAAATATAAAGGAAGATGGGACAGGCTTTTCAAAATAAAAGCTAGTT 360
consensus_1902#1 CATTAGTATCTAACAAATATAAAGGAAGATGGGACAGGCTTTTCAAAATAAAAGCTAGTT 292
************************************************************
consensus_1902#0 TTCCAGAGCATTGGAATGACGATGAACTTGATACCCATCTTATTAACAATGAACCTATTC 420
consensus_1902#1 TTCCAGAGCATTGGAATGACGATGAACTTGATACCCATCTTATTAACAATGAACCTATTC 352
************************************************************
consensus_1902#0 GA---------------------------------------------------------- 422
consensus_1902#1 GAGATCAAAACAACAATGAAAACATGAACCAGAATAAAAGAAAACATATTGAAAATGTGC 412
**
consensus_1902#0 ---ATATGGCAGAATACGACAATATCAACGACGAAAGGAAAGAAATTCCAGAAATATTAC 479
consensus_1902#1 AGAATATGGCAGAATACGACAATATCAACGACGAAAGGAAAGAAATTCCAGAAATATTAC 472
*********************************************************
consensus_1902#0 TGATATCGAATAATGAGAATAATCATCATGACAGTAAACCACAAAATGCAGAGTTATTCA 539
consensus_1902#1 TGATATCGAATAATGAGAATAATCATCATGACAGTAAACCACAAAATGCAGAGTTATTCA 532
************************************************************
consensus_1902#0 AATTTTTGAGTAACACAAATGATAATTTCGAATAAGAGAAAGGAATATTGCTATCACATA 599
consensus_1902#1 AATTTTTGAGTAACACAAATGATAATTTCGAATANGAGAAAGGAATATTGCTATCACATA 592
********************************** *************************
consensus_1902#0 TAATGTAAAATAGAAAT 616
consensus_1902#1 TAATGTAAAATAGAA-- 607
***************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |