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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1907#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 548 fasta sequence
[TTCTAGAAAATTATATATTAGACACACACAGAATGTATAACAAAGTAGCATTGCACTTAGAGACTGCTTTCCGCGCTCTTTTATACGTTGAATCGCGATTGACCGCGAGTGTTAACGGATATTGGTAAAAGTTTTGTGTGCAAACCCGTTGTTACTCCGCAATGTAATTTCGTTAGCCACTTAATTCTACAGAGTACAGGAGGTAGTACAGGAGAAGATGAGGAAGATCTTAGTGGCACTTGTCTTGAAACTAAACACAACACACATCACAATGAGTTCCTTGATCATGAACTCATAGAAGAACGGACAGCAAAAATGTTTACACAAAGGCGAAACAAAAGGCATTACCGTACTTCCTACAGGTCATGTATAAATAGGCACAGTTGCCATTCCGATTTGGAGGCAGATGACGAGGAATTCGATTCCTTGAATCAGTCTGACAGTGTCAATCAATCAGACCATGGAAATCATGAACCACAATCCTCTGTGAATGCTACGAATCAACCAAGACTGTCTACTCCAACAGGAGACAATCCACACGAATTGAT]
[+] EMBL BI504684 [TTCTAGAAAATTATATATTAGACACACACAGAATGTATAACAAAGTAGCATTGCACTTAGAGACTGCTTTCCGCGCTCTTTTATACGTTGAATCGCGATTGACCGCGAGTGTTAACGGATATTGGTAAAAGTTTTGTGTGCAAACCCGTTGTTACTCCGCAATGTAATTTCGTTAGCCACTTAATTCTACAGAGTACAGGAGGTAGTACAGGAGAAGATGAGGAAGATCTTAGTGGCACTTGTCTTGAAACTAAACACAACACACATCACAATGAGTTCCTTGATCATGAACTCATAGAAGAACGGACAGCAAAAATGTTTACACAAAGGCGAAACAAAAGGCATTACCGTACTTCCTACAGGTCATGTATAAATAGGCACAGTTGCCATTCCGATTTGGAGGCAGATGACGAGGAATTCGATTCCTTGAATCAGTCTGACAGTGTCAATCAATCAGACCATGGAAATCATGAACCACAATCCTCTGTGAATGCTACGAATCAACCAAGACTGTCTACTCCAACAGGAGACAATCCACACGAATTGAT]
consensusID : consensus_1907#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence
[TGCGCGAATGTATCTTTCTAGAAAATTATATATTAGACACACACAGAATGTATAACAAAGTAGCATTGCACTTAGAGACTGCTTTCCGCGCTCTTTTATACGTTCAATCGCGATTGACCGCGAGTGTTAACGGATATTGGTAAAAGTTTTGTGTGCAAACCCGTTGTTACTCCGCAATGTAATTTCGTTAGCCACTTAATTCTACAGAGTACAGGAGGTAGTACAGGAGAAGATGAGGAAGATCTTAGTGGCACTTGTCTTGAAACTAAACACAACACACATCACAATGAGTTCCTTGATCATGAACTCATAGAAGTAAGTGCGTGTGATTTTCACTTTTTAATAAAAAAATATTCTGTTCACTTATTNNGAAACGCGGTTAAATGTCGATCGTATGTAATAGAGAAATTATGTATGTATGTGTAACTACGCATGTTTCAGGAACGGACAGC]
[+] EMBL BI512749 [TGCGCGAATGTATCTTTCTAGAAAATTATATATTAGACACACACAGAATGTATAACAAAGTAGCATTGCACTTAGAGACTGCTTTCCGCGCTCTTTTATACGTTCAATCGCGATTGACCGCGAGTGTTAACGGATATTGGTAAAAGTTTTGTGTGCAAACCCGTTGTTACTCCGCAATGTAATTTCGTTAGCCACTTAATTCTACAGAGTACAGGAGGTAGTACAGGAGAAGATGAGGAAGATCTTAGTGGCACTTGTCTTGAAACTAAACACAACACACATCACAATGAGTTCCTTGATCATGAACTCATAGAAGTAAGTGCGTGTGATTTTCACTTTTTAATAAAAAAATATTCTGTTCACTTATTNNGAAACGCGGTTAAATGTCGATCGTATGTAATAGAGAAATTATGTATGTATGTGTAACTACGCATGTTTCAGGAACGGACAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1907#0 ---------------TTCTAGAAAATTATATATTAGACACACACAGAATGTATAACAAAG 45
consensus_1907#1 TGCGCGAATGTATCTTTCTAGAAAATTATATATTAGACACACACAGAATGTATAACAAAG 60
*********************************************
consensus_1907#0 TAGCATTGCACTTAGAGACTGCTTTCCGCGCTCTTTTATACGTTGAATCGCGATTGACCG 105
consensus_1907#1 TAGCATTGCACTTAGAGACTGCTTTCCGCGCTCTTTTATACGTTCAATCGCGATTGACCG 120
******************************************** ***************
consensus_1907#0 CGAGTGTTAACGGATATTGGTAAAAGTTTTGTGTGCAAACCCGTTGTTACTCCGCAATGT 165
consensus_1907#1 CGAGTGTTAACGGATATTGGTAAAAGTTTTGTGTGCAAACCCGTTGTTACTCCGCAATGT 180
************************************************************
consensus_1907#0 AATTTCGTTAGCCACTTAATTCTACAGAGTACAGGAGGTAGTACAGGAGAAGATGAGGAA 225
consensus_1907#1 AATTTCGTTAGCCACTTAATTCTACAGAGTACAGGAGGTAGTACAGGAGAAGATGAGGAA 240
************************************************************
consensus_1907#0 GATCTTAGTGGCACTTGTCTTGAAACTAAACACAACACACATCACAATGAGTTCCTTGAT 285
consensus_1907#1 GATCTTAGTGGCACTTGTCTTGAAACTAAACACAACACACATCACAATGAGTTCCTTGAT 300
************************************************************
consensus_1907#0 CATGAACTCATAGAAGAACGGACAGCAAAAATGTTTACACAAAGGCGAAACAAAAGGCAT 345
consensus_1907#1 CATGAACTCATAGAAGTAAGTGCGT--GTGATTTTCACTTTTTAATAAAAAAATATTCTG 358
**************** * * * ** ** ** *** ** * *
consensus_1907#0 TACCGTACTTCCTACAGGTCATGTATAAATAGGCACAGT-TGCCATTCCGATTTGGAGGC 404
consensus_1907#1 TTC---ACTTATTNNGAAACGCGGTTAAATGTCGATCGTATGTAATAGAGAAATT-ATGT 414
* * **** * * * ***** * ** ** ** ** * * *
consensus_1907#0 AGATGACGAGGAATTCGATTCCTTGAATCAGTCTGACAGTGTCAATCAATCAGACCATGG 464
consensus_1907#1 ATGTATGTGTAACTACGCATGTTTCAGGAA--CGGACAGC-------------------- 452
* * * * ** * ** * * * *****
consensus_1907#0 AAATCATGAACCACAATCCTCTGTGAATGCTACGAATCAACCAAGACTGTCTACTCCAAC 524
consensus_1907#1 ------------------------------------------------------------
consensus_1907#0 AGGAGACAATCCACACGAATTGAT 548
consensus_1907#1 ------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |