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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_191#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 788 fasta sequence
[AAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCTGCACATAACCGAAAAACTCCTTTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATGCCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGATACTAACGTCATAACAACCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCCTCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCTGAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGGCTACATATGAGCTCTGTCATCGATATTCTAGACTCGGCTTGTTGAGCTCGTTCTTCGGCTCTCATTTCTTCGATGTCTTCTTCCACTTGGTTACTGGCTCTCAACCTCCTCAAAGCTTTACGGGCTTCCTCCTCCCACTGTTTAGTAATGAGCAAATATCTTGGAGATTCGGGGCAAACTGGAAGCAGCAATAACTGTAGAAATGGCAGGGCAGATAGCTAGTAATAAGAGAACTGGCCAACCCTCGTCTGTTCCAAGGATTTGCTCGATGCCCAGCACCTGGGAGACCAGGAAGCCCACCGTAAACAGCGAGCTGGTTCACCGTGCCTAGGCCGCCTCTCAAGGTTCAGTGGTGCTATCTCCGATATGTACATGGGGAACCAACGAAGTGTTTAACCCACAATTGACACCGATGATGAACCCTCCAAAGAA]
[-] EMBL BI510280 [AAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCTGCACATAACCGAAAAACTCCTTTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATGCCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGATACTAACGTCATAACAACCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCCTCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCTGAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGGCTACATATGAGCTCTGTCATCGATATTCTAGACTCGGCTTGTTGAGCTCGTTCTTCGGCTCTCATTTCTTCGATGTCTTCTTCCACTTGGTTACTGGCTCTCAACCTCCTCAAAGCTTTACGGGCTTCCTCCTCCCACTGTTTAGTAATGAGCAAATATCTTGGAGATTCGGGGCAAACTGGAAGCAGCAATAACTGTAG AATGGCAGGGCAGATAGCTAGTA ]
[+] EMBL BE844475 [ CCTGTCCTATCCATAAGAGGGATGGATACTAACGTCATAACAACCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCCTCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCTGAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGGCTACATATGAGCTCTGTCATCGATATTCTAGACTCGGCTTGTTGAGCTCGTTCTTCGGCTCTCATTTCTTCGATGTCTTCTTCCACTTGGTTACTGGCTCTCAACCTCCTCAAAGCTTTACGGGCTTCCTCCTCCCACTGTTTAGTAATGAGCAAATATCTTGGAGATTCGGGGCAAACTGGAAGCAGCAATAACTGTAGAAATGGCAGGGCAGATAGCTAGTAATAAGAGAACTGGCCAACCCTCGTCTGTTCCAAGGATTTGCTCGATGCCCAGCACCTGGGAGACCAGGAAGCCCACCGTAAACAGCGAGCTGGTTCACCGTGCCTAGGCCGCCTCTCAAGGTTCAGTGGTGCTATCTCCGATATGTACATGGGGAACCAACGAAGTGTTTAACCCACAATTGACACCGATGATGAACCCTCCAAAGAA]
consensusID : consensus_191#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 654 fasta sequence
[CAAGCTGCTCCTGTCGTTACCATGCCTGAATAAAGCTAGAATTTCTTCGAATGTTTTATTCTTGGTCTCAGGAACCTGCTTGTACGTGAAGATCCAGAAGATGGCTAGGAATGCACTGAATGGTAGGAACGTGTAGTTTTCAAGGCTAGTCTTCATACTTGGAAAACCGATGCCAACCACAAAATTAGCTATCCAATTGACGAGGACCGCGATGACATGGCCGCAGGTCTGGGGCCTTGCGAGAACAGTTCGGCCGTGATCATCCACGGGATGGAGCCGGGGCCCACGGCAAAAAATACGACGAAAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCTTTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATGCCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGATACTAACGTCATAACANNCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCCTCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCTGAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGGCTACATATGAGCTCT]
[-] EMBL BI505692 [CAAGCTGCTCCTGTCGTTACCATGCCTGAATAAAGCTAGAATTTCTTCGAATGTTTTATTCTTGGTCTCAGGAACCTGCTTGTACGTGAAGATCCAGAAGATGGCTAGGAATGCACTGAATGGTAGGAACGTGTAGTTTTCAAGGCTAGTCTTCATACTTGGAAAACCGATGCCAACCACAAAATTAGCTATCCAATTGACGAGGACCGCGATGACATGGCCGCAGGTCTGGGGCCTTGCGAGAACAGTTCGGCCGTGATCATCCACGGGATGGAGCCGGGGCCCACGGCAAAAAATACGACGAAAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCTTTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATGCCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGATACTAAC ]
[-] EMBL BI516958 [ AAAATACGACGAAAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCTTTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATGCCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGATACTAACGTCATAACANNCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCCTCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCTGAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGGCTACATATGAGCTCT]
consensusID : consensus_191#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 561 fasta sequence
[ATTATTTGTTTGAGTTCCATAGGTGTTTACGATTAATTTCCTCCTGAGAGAGAACTCCTCCGGCTGCTCAGGAAAGAAGAACACGATTCTACTGCCTGATAGGAGTTTTTCGGTTATGTGCAGGAAATGATTGACTGGATGTCTTATCTGTCGGTCGTCTCGACGCTCTTTTTCGTCGTATTTTTCGCCGTGGGCCCCGGCTCCATCCCGTGGATGATCACGGCCGAACTGTTCTCGCAAGGCCCCAGACCTGCGGCCATGTCCATCGCGGTCCTCGTCAATTGGATAGCTAATTTTGTGGTTGGCATCGGTTTTCCAAGTATGAAGACTAGCCTTGAAAACTACACGTTCCTACCATTCAGTGCATTCCTAGCCATCTTCTGGATCTTCACGTACAAGCAGGTTCCTGAGACCAAGAATAAAACATTCGAAGAAATTCTAGCTTTATTCAGGCATGGTAACGACAGGAGCAGCTTGCGGGACAGCAGACTTTATGGGGAAGAGGAGCTCGCCACTAACTCTAGCAAGGAGACCGTCCTATCTGACGCCACCACTGCCAAC]
[+] EMBL BI510256 [ATTATTTGTTTGAGTTCCATAGGTGTTTACGATTAATTTCCTCCTGAGAGAGAACTCCTCCGGCTGCTCAGGAAAGAAGAACACGATTCTACTGCCTGATAGGAGTTTTTCGGTTATGTGCAGGAAATGATTGACTGGATGTCTTATCTGTCGGTCGTCTCGACGCTCTTTTTCGTCGTATTTTTCGCCGTGGGCCCCGGCTCCATCCCGTGGATGATCACGGCCGAACTGTTCTCGCAAGGCCCCAGACCTGCGGCCATGTCCATCGCGGTCCTCGTCAATTGGATAGCTAATTTTGTGGTTGGCATCGGTTTTCCAAGTATGAAGACTAGCCTTGAAAACTACACGTTCCTACCATTCAGTGCATTCCTAGCCATCTTCTGGATCTTCACGTACAAGCAGGTTCCTGAGACCAAGAATAAAACATTCGAAGAAATTCTAGCTTTATTCAGGCATGGTAACGACAGGAGCAGCTTGCGGGACAGCAGACTTTATGGGGAAGAGGAGCTCGCCACTAACTCTAGCAAGGAGACCGTCCTATCTGACGCCACCACTGCCAAC]
[-] EMBL BI509566 [ tTTTTTTTGAGTTCCATAGGTGTTTACGATTAATTTCCTCCTGAGAGAGAACTCCTCCGGCTGCTCAGGAAAGAAGAACACGATTCTACTGCCTGATAGGAGTTTTTCGGTTATGTGCAGGAAATGATTGACTGGATGTCTTATCTGTCGGTCGTCTCGACGCTCTTTTTCGTCGTATTTTTCGCCGTGGGCCCCGGCTCCATCCCGTGGATGATCACGGCCGAACTGTTCTCGCAAGGCCCCAGACCTGCGGCCATGTCCATCGCGGTCCTCGTCAATTGGATAGCTAATTTTGTGGTTGGCATCGGTTTTCCAAGTATGAAGACTAGCCTTGAAAACTACACGTTCCTACCATTCAGTGCATTCCTAGCCATCTTCTGGATCTTCACGTACAAGCAGGTTCCTGAGACCAAGAATAAAACATTCGAAGAAATTCTAGCTTTATTCAGGCATGGTAACGACAGGAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_191#0 ------------------------------------------------------------
consensus_191#1 CAAGCTGCTCCTGTCGTTACCATGCCTGAATAAAGCTAGAATTTCTTCGAATGTTTTATT 60
consensus_191#2 ------------------------------------------------------------
consensus_191#0 ------------------------------------------------------------
consensus_191#1 CTTGGTCTCAGGAACCTGCTTGTACGTGAAGATCCAGAAGATGGCTAGGAATGCACTGAA 120
consensus_191#2 ------------------------------------------------------------
consensus_191#0 ------------------------------------------------------------
consensus_191#1 TGGTAGGAACGTGTAGTTTTCAAGGCTAGTCTTCATACTTGGAAAACCGATGCCAACCAC 180
consensus_191#2 ------------------------------------------------------------
consensus_191#0 ------------------------------------------------------------
consensus_191#1 AAAATTAGCTATCCAATTGACGAGGACCGCGATGACATGGCCGCAGGTCTGGGGCCTTGC 240
consensus_191#2 ------------------------------------------------------------
consensus_191#0 ------------------------------------------------------------
consensus_191#1 GAGAACAGTTCGGCCGTGATCATCCACGGGATGGAGCCGGGGCCCACGGCAAAAAATACG 300
consensus_191#2 ------------------------------------------------------------
consensus_191#0 ----AAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCTGCACA 56
consensus_191#1 ACGAAAAAGAGCGTCGAGACGACCGACAGATAAGACATCCAGTCAATCATTTCCT----- 355
consensus_191#2 ---------ATTATTTGTTTGAGTTCCAT---AGGTGTTTA--CGATTAATTTCC----- 41
* * ** ** ** * * * ** * ** *
consensus_191#0 TAACCGAAAAACTCCTTTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATG 116
consensus_191#1 ----------------TTATGAGAAAAGAAATTGTGATGAATATTGAAAAGATAAACATG 399
consensus_191#2 ----------------TCCTGAGAGAGAACTCCTCCGGCTGCTCAGGAAAGAAGAACACG 85
* ***** * * * ***** **** *
consensus_191#0 CCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGAT 176
consensus_191#1 CCACCAAGACCGTATAAGTGCAATGTACGTCTTCCTGTCCTATCCATAAGAGGGATGGAT 459
consensus_191#2 ATTCTACTGCCTGATAGGAG---------TTTTTCGGTTATGTGCAGGAAATGATTGACT 136
* * ** *** * * * ** * ** * * ** * * * ** *
consensus_191#0 ACTAACGTCATAACAACCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCC 236
consensus_191#1 ACTAACGTCATAACANNCATAATGGAACCTATGCCAATGGTTGCAAACTTGGCACTCTCC 519
consensus_191#2 G--GATGTCTTATCTGTCGG--------TCGTCTCGACGCTCTTTTTCGTCGTATTTTTC 186
* *** ** * * * * * * * * * * * * * *
consensus_191#0 TCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCT 296
consensus_191#1 TCTGTCAAACCAGAACTAGTATACAAATTTGTCGAATAGTAAAATACAGCGTTAATGCCT 579
consensus_191#2 GCCGTGGGCCCCGGCTCCAT-CCCGTGGATGATCACGGCCGAACTGTTCTCGCAAGGCCC 245
* ** ** * * * ** * ** * ** ***
consensus_191#0 GAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGG 356
consensus_191#1 GAAAGCTGTTGGGAAAGTTGCATAACCACACCGATGATAAGAGGTGCTCTCAAAGTTGGG 639
consensus_191#2 CAGACCTGC--GGCCATGTCCATCGCGGTCCTCGTCAATTGGATAGCT---AATTTTGTG 300
* * *** ** * * *** * * * * * *** ** *** *
consensus_191#0 CTACATATGAGCTCTGTCATCGATATTCTAGACTCGGCTTGTTGA--GCTCGTTCTTCGG 414
consensus_191#1 CTACATATGAGCTCT--------------------------------------------- 654
consensus_191#2 GTTGGCATCGGTTTT----CCAAGTATGAAGACTAGCCTTGAAAACTACACGTTCCTACC 356
* ** * * *
consensus_191#0 CTCTCATTTCTTCGATGTCTTCTTCCACTTGGTTACTGGCTCTCAACCTCCTCAAAGCTT 474
consensus_191#1 ------------------------------------------------------------
consensus_191#2 ATTCAGTGCATTCCTAGCCATCTTCTGGATCTTCACGTACAAGCAGGTTCCTGAGACCAA 416
consensus_191#0 TACGGGCTTCCTCCTCCCACTGTTTAGTAATGAGCAAATATCTTGGAGATTCGGGGCAAA 534
consensus_191#1 ------------------------------------------------------------
consensus_191#2 GAATAAAACATTCGAAGAAAT-TCTAGCTTTATTCAGGCATGGTAACGACAGGAGCAGCT 475
consensus_191#0 CTGGAAGCAGCAATAACTGTAGAAATGGCAGGGCAGATAGCTAGT--AATAAGAGAACTG 592
consensus_191#1 ------------------------------------------------------------
consensus_191#2 TGCGGGACAGCAGACTTTATGGGGAAGAGGAGCTCGCCACTAACTCTAGCAAGGAGACCG 535
consensus_191#0 GCCAACCCTCGTCTGTTCCAAGGATTTGCTCGATGCCCAGCACCTGGGAGACCAGGAAGC 652
consensus_191#1 ------------------------------------------------------------
consensus_191#2 TCCTATCTGACGCCACCACTGCCAAC---------------------------------- 561
consensus_191#0 CCACCGTAAACAGCGAGCTGGTTCACCGTGCCTAGGCCGCCTCTCAAGGTTCAGTGGTGC 712
consensus_191#1 ------------------------------------------------------------
consensus_191#2 ------------------------------------------------------------
consensus_191#0 TATCTCCGATATGTACATGGGGAACCAACGAAGTGTTTAACCCACAATTGACACCGATGA 772
consensus_191#1 ------------------------------------------------------------
consensus_191#2 ------------------------------------------------------------
consensus_191#0 TGAACCCTCCAAAGAA 788
consensus_191#1 ----------------
consensus_191#2 ----------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |