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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1921#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence
[CTGGTGGTTCTGGATTAGGAGGTCCTTTGAGATACCGCAATGCCATTCTATTATGGATCAATTGTGACATGAAAGTCCTCGAGGATCGGTTGGAGAGAAGGGTCGACGACATGGTGGAGACCGGTCTGGTTCAGGAACTGCTTGACTTTCATCGGAGATACAACAAGCAACGGATTAAATCCAACACATCAGTCGATTATACGAAGGGCATTTTTCAAAGTATCGGCTTCAAAGAGTTTCATGATTACCTTGTGTTGCCAGAAGAAGAGAAGGGAGGGAAAAAAGGACAAGAATTATTGCAAAGGGGTATTGATGACTTAAAAATGGTCACGAAGAGGTACGCGAAAAAACAGAAAAAATGGGTTATGAATCGTCTACTTCGTCGCAGTGACAGACAAGTACCACCAATTTATGTATTAGATTCTACCGATGTGAATCAATGGGACAGTTGTGTATATGAACCAGCTGTGGCAAT]
[+] EMBL BI514586 [CTGGTGGTTCTGGATTAGGAGGTCCTTTGAGATACCGCAATGCCATTCTATTATGGATCAATTGTGACATGAAAGTCCTCGAGGATCGGTTGGAGAGAAGGGTCGACGACATGGTGGAGACCGGTCTGGTTCAGGAACTGCTTGACTTTCATCGGAGATACAACAAGCAACGGATTAAATCCAACACATCAGTCGATTATACGAAGGGCATTTTTCAAAGTATCGGCTTCAAAGAGTTTCATGATTACCTTGTGTTGCCAGAAGAAGAGAAGGGAGGGAAAAAAGGACAAGAATTATTGCAAAGGGGTATTGATGACTTAAAAATGGTCACGAAGAGGTACGCGAAAAAACAGAAAAAATGGGTTATGAATCGTCTACTTCGTCGCAGTGACAGACAAGTACCACCAATTTATGTATTAGATTCTACCGATGTGAATCAATGGGACAGTTGTGTATATGAACCAGCTGTGGCAAT]
consensusID : consensus_1921#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 327 fasta sequence
[CTTTTTTCTTTTTTCAATTCTTTTATGCTTTGTACTTTTTAAATGAATGTTCCATTGAAATTCTCCAATAAATATCCTATCGCAAATATCACAAAAGTGTCTTTCCTCGTTGCTACTATCACTGAATTTTTTATTCTCTATTGATTCGTTTAAAGGTTTTTGTTCAGGCTTTTCTCCTCTTAGCACAGCTTCGATTATTGCCACAGCTGGTTCATATACACAACTGTCCCATTGATTCACATCGGTAGAATCTAATACATAAATTGGTGGTACCTGTAATCATTTTAAGTTAAAATAATTTTATGTTATGGAAATAAAAAAAAAAAA]
[+] EMBL BI516042 [CTTTTTTCTTTTTTCAATTCTTTTATGCTTTGTACTTTTTAAATGAATGTTCCATTGAAATTCTCCAATAAATATCCTATCGCAAATATCACAAAAGTGTCTTTCCTCGTTGCTACTATCACTGAATTTTTTATTCTCTATTGATTCGTTTAAAGGTTTTTGTTCAGGCTTTTCTCCTCTTAGCACAGCTTCGATTATTGCCACAGCTGGTTCATATACACAACTGTCCCATTGATTCACATCGGTAGAATCTAATACATAAATTGGTGGTACCTGTAATCATTTTAAGTTAAAATAATTTTATGTTATGGAAATAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1921#0 CTGGTGGTTCTGGATTAGGAGGTCCTTTGAGATACCGCAATGCCATTCTATTATGGATCA 60
consensus_1921#1 -----------------------CTTTTTTCTTTTTTCAATTCTTTTATGCTTTG---TA 34
* *** * **** * ** * * ** *
consensus_1921#0 ATTGTGACATGAAAGTCCTCGAGGATCGGTTGGAGAGAAGGGTCGACG-ACATGGTGGAG 119
consensus_1921#1 CTTTTTAAATGAATGTTCCATTGAAATTCTCCAATAAATATCCTATCGCAAATATCACAA 94
** * * ***** ** * * * * * * * ** * ** *
consensus_1921#0 ACCGGTCTGGTTCAGGAACTGCTTGACTTTCATCGGAGATACAACAAGCAACGGATTAAA 179
consensus_1921#1 AAGTGTCTTTCCTCGTTGCTACTATCACTGAATTTTTTATTCTCTATTGATTCGTTTAAA 154
* **** * ** ** * ** ** * * * * *****
consensus_1921#0 TCCAACACATCAGTCGATTATACGAAGGGCATTTTTCAAAGTATCGGCTTCAAAGAGTTT 239
consensus_1921#1 GGTTTTTGTTCAGGCTTTTCTCCTCTTAGCACAGCTTCGATTATTGCCAC--AGCTGGTT 212
**** * ** * * *** * * *** * * * * **
consensus_1921#0 CATGATTACCTTGTGTTGCCAGAAGAAGAGAAGGGAGGGAAAAAAGGACAAGAATTATTG 299
consensus_1921#1 CATATACACAAC-TGT--CCCATTGATTCACATCGGTAGAATCTAATACATAAATTGGTG 269
*** ** *** ** ** * * *** * *** **** **
consensus_1921#0 CAAAGGGGTATTGATG-ACTTAAAAATGGTCACGAAGAGGTACGCGAAAAAACAGAAAAA 358
consensus_1921#1 GTACCTGTAATCATTTTAAGTTAAAATAATTTTAT---GTTATGGAAATAAAAAAAAAAA 326
* * ** * * * ***** * * ** * ** *** * *****
consensus_1921#0 ATGGGTTATGAATCGTCTACTTCGTCGCAGTGACAGACAAGTACCACCAATTTATGTATT 418
consensus_1921#1 A----------------------------------------------------------- 327
*
consensus_1921#0 AGATTCTACCGATGTGAATCAATGGGACAGTTGTGTATATGAACCAGCTGTGGCAAT 475
consensus_1921#1 ---------------------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |