These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 385 fasta sequence [CGAGAGAAGAGGAAATTCTATTCGATTTTCCACCGAATCCGATAGAGTTTTAATTTCTCTCCTCGTGATTATTGTATGAATGTAAATCGATTATATCGCATAGCATATGCATTCGAAGGGTTGAAGTTGAATTTTATCGATACACGATCGACTCGCTCGTATTCGCTCGTTTTTATCGCGCGCGCGCGCGCGCACGCGCGTTCGTAAACCAGAGTATTTGAACGCGTAACAAGAGAGAATCGAAGCTCGTTCATTGAGGAACGTAAGAAGGAATCGGTCGAGGCTGCGTATTTTGCGTAGNGATCGTCTACCGTTGAACGGGGCAGTATCGTTTGTTCATTGGCGACGCGACGCACCGCCAGTGGCACACTTGTCGCTTGGAAAG] [+] EMBL BI512882 [CGAGAGAAGAGGAAATTCTATTCGATTTTCCACCGAATCCGATAGAGTTTTAATTTCTCTCCTCGTGATTATTGTATGAATGTAAATCGATTATATCGCATAGCATATGCATTCGAAGGGTTGAAGTTGAATTTTATCGATACACGATCGACTCGCTCGTATTCGCTCGTTTTTATCGCGCGCGCGCGCGCGCACGCGCGTTCGTAAACCAGAGTATTTGAACGCGTAACAAGAGAGAATCGAAGCTCGTTCATTGAGGAACGTAAGAAGGAATCGGTCGAGGCTGCGTATTTTGCGTAGNGATCGTCTACCGTTGAACGGGGCAGTATCGTTTGTTCATTGGCGACGCGACGCACCGCCAGTGGCACACTTGTCGCTTGGAAAG] consensusID : consensus_1928#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 263 fasta sequence [AGCCAAGGGGAAAGGTAGATGATCGTTTGGCCGCGTTAGGCTGCGTATTTTGCGTAGAGATCGTCTACCGTTGAACGGGGCAGTATCGTTTGTTCATTGGCGACGCGACGCACCGCCAGTGGCACACTTGTCGCTTGGAAAGGAGAATAGACTTTCTCCTTCTCGTCGTTCCTCGTACCACCGCCGCCTTTCGTCTCGTTCTTGTACGGGAAGAATTGCAATCAAAGAAAGATAACATTGACGACGACGACGACGACGACAAG] [+] EMBL BI514894 [AGCCAAGGGGAAAGGTAGATGATCGTTTGGCCGCGTTAGGCTGCGTATTTTGCGTAGAGATCGTCTACCGTTGAACGGGGCAGTATCGTTTGTTCATTGGCGACGCGACGCACCGCCAGTGGCACACTTGTCGCTTGGAAAGGAGAATAGACTTTCTCCTTCTCGTCGTTCCTCGTACCACCGCCGCCTTTCGTCTCGTTCTTGTACGGGAAGAATTGCAATCAAAGAAAGATAACATTGACGACGACGACGACGACGACAAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1928#0 CGAGAGAAGAGGAAATTCTATTCGATTTTCCACCGAATCCGATAGAGTTTTAATTTCTCT 60 consensus_1928#1 --AGCCAAGGGGAAAGGTAGATGATCGTTTGGCCGCGTTAGGCTGCGTATTTTGCGTAGA 58 ** *** ***** * ** *** * * * ** ** consensus_1928#0 CCTCGTG-ATTATTGTATGAATGTAAATCGATTAT--ATCGCATAGCATATGCATTCGAA 117 consensus_1928#1 GATCGTCTACCGTTGAACGGGGCAGTATCGTTTGTTCATTGGCGACGCGACGCACCGCCA 118 **** * *** * * **** ** * ** * * * *** * consensus_1928#0 GGGTTGAAGTTGAATTTTATCGATACACGATCGACTCGCTCGTATTCGCTCGTTTTTATC 177 consensus_1928#1 GTGGCACACTTGTCGCTTGG-AAAGGAGAATAGACTTTCTCCTTCTCG-TCGTTCCTCGT 176 * * * *** ** * * ** **** *** * *** ***** * consensus_1928#0 GCGCGCGCGCGCGCGCACGCGCGTTCGTAAACCAGAGTATTTGAACGCGTAACAAGAGAG 237 consensus_1928#1 ACCACCGC-CGCCTTTCGTCTCGTTCTTGTACGGGAAGAATTGCAATCAAAGAAAGATAA 235 * *** *** * ***** * ** ** * *** * * * **** * consensus_1928#0 AATCGAAGCTCGTTCATTGAGGAACGTAAGAAGGAATCGGTCGAGGCTGCGTATTTTGCG 297 consensus_1928#1 CATTGACGACGA--CGACGACGACGACAAG------------------------------ 263 ** ** * * ** ** *** consensus_1928#0 TAGNGATCGTCTACCGTTGAACGGGGCAGTATCGTTTGTTCATTGGCGACGCGACGCACC 357 consensus_1928#1 ------------------------------------------------------------ consensus_1928#0 GCCAGTGGCACACTTGTCGCTTGGAAAG 385 consensus_1928#1 ---------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |