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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_194#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 773 fasta sequence
[GTTTAACACAAATGTCGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCCTGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGATGAAAGCTAATGCNNGCATATATCTGCTCATATATAAGTTATCATANACGAGGCAGGATCCTTCGCCGTCACAAGTTTTGTTCCATAAAATGCATGTTTCATCTATAAGAGCACCGAACACCATAGGTGCTGGTATTGTGCCTAGAATTCTAACTTTGATCCATTGTATACCTAAGGCAAACGATCTTTGATCGTCTCGAACGACACGAAGTGTCGCAGAAAGTGCAGGCATTGTGCAAAGAAAGGTTATAAACATGTTGCAAAATGCTAGAGCGATAAAAGGCCATAGATAAGAGCATGATGTGCTGCAAGTAGTGTTTATTGCCTCGTAACTAATCACACTATCTGCAGTAGTTAGATTCATTGGTGGTGCTCTTATACACGTGCAGTCTGTATATATTTCGACGTTATTTAGTCGCATTTCTTGATAACATCCTGCATGACAAGGGGAATAGTACGTGATTCCATCAACTCCGCATATTGGACTGAACTCTGATCTCGAGCAGCCGCAGCCATTATTGCACGTGTTATCCAATGAAAATGTTTTTTTGGTCTGGTTCGAATAAGGTATAGTGACTCCTGCGAAGTTTAAATTCGGACAATTCAGAACGAAGCACAAAGGTGAAAGCGATGCAGGACGCGGTTGCCAGTATA]
[-] EMBL BI509332 [GTTTAACACAAATGTCGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCCTGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGATGAAAGCTAATGCTAGCATATATCTGCTCATATATAAGTTATCATAAACGAGGCAGGATCCTTCGCCGTCACAAGTTTTGTTCCATAAAATGCATGTTTCATCTATAAGAGCACCGAACACCATAGGTGCTGGTATTGTGCCTAGAATTCTAACTTTGATCCATTGTATACCTAAGGCAAACGATCTTTGATCGTCTCGAACGACACGAAGTGTCGCAGAAAGTGCAGGCATTGTGCAAAGAAAGGTTATAAACATGTTGCAAAATGCTAGAGCGATAAAAGGCCATAGATAAGAGCATGATGTGCTGCAAGTAGTGTTTATTGCCTCGTAACTAATCACACTATCTGCAGTAGTTAGATTCATTGGTGGTGCTCTTATACACGTGCAGTCTGTATATATTTCGACGTTATTTAGTCGCATTTCTTGATAACATCCTGCATGACAAGGGGAATAGTACGTGATTCCATCAACTCCGCATATTGGACTGAACTCTGATCTCGAGCAGCC ]
[-] EMBL BI504586 [ TCTACTTCCTGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGATGAAAGCTAATGCNNGCATATATCTGCTCATATATAAGTTATCATANACGAGGCAGGATCCTTCGCCGTCACAAGTTTTGTTCCATAAAATGCATGTTTCATCTATAAGAGCACCGAACACCATAGGTGCTGGTATTGTGCCTAGAATTCTAACTTTGATCCATTGTATACCTAAGGCAAACGATCTTTGATCGTCTCGAACGACACGAAGTGTCGCAGAAAGTGCAGGCATTGTGCAAAGAAAGGTTATAAACATGTTGCAAAATGCTAGAGCGATAAAAGGCCATAGATAAGAGCATGATGTGCTGCAAGTAGTGTTTATTGCCTCGTAACTAATCACACTATCTGCAGTAGTTAGATTCATTGGTGGTGCTCTTATACACGTGCAGTCTGTATATATTTCGACGTTATTTAGTCGCATTTCTTGATAACATCCTGCATGACAAGGGGAATAGTACGTGATTCCATCAACTCCGCATATTGGACTGAACTCTGATCTCGAGCAGCC ]
[+] EMBL BE844542 [ CTCGAACGACACGAAGTGTCGCAGAAAGTGCAGGCATTGTGCAAAGAAAGGTTATAAACATGTTGCAAAATGCTAGAGCGATAAAAGGCCATAGATAAGAGCATGATGTGCTGCAAGTAGTGTTTATTGCCTCGTAACTAATCACACTATCTGCAGTAGTTAGATTCATTGGTGGTGCTCTTATACACGTGCAGTCTGTATATATTTCGACGTTATTTAGTCGCATTCCTTGATAACATCCTGCATGACAAGGGGAATAGTACGTGATTCCATCAACTCCGCATATTGGACTGAACTCTGATCTCGAGCAGCCGCAGCCATTATTGCACGTGTTATCCAATGAAAATGTTTTTTTGGTCTGGTTCGAATAAGGTATAGTGACTCCTGCGAAGTTTAAATTCGGACAATTCAGAACGAAGCACAAAGGTGAAAGCGATGCAGGACGCGGTTGCCAGTATA]
consensusID : consensus_194#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 697 fasta sequence
[TTAACACAAATGTCGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCCTGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGATGAAAGCTAATGCTAGCATATATCTGAAACAAGGATGGTCGAATCACCTTTGGAAACCTCTTCTCGATGACCCTTCATCAAGGCCAGCTGCTTGAAATTGGTGCTCACATCCCAAACTCTGGCCGTGGTGTCGCTGCTCGCAGTGGCCAACTTTTTCCCATTGTTGTCGAAGGTCAGGTCCAGGACCTCGTCATCGTGTCCTCGAAATGTGACCAGGCACGAGTTCATTTTCGTGTCCCACACTTTGGCCGTTTTATCCATCGATGACGAAGCGATCAACGAGCAATCGAAGTTGTAAATGCAGTTTGATAATTCGGATCGATGGCCGATCAACACGCATACGCGACTGGGAAAAAAGATTTTTTTAATTATTATTTTTAATTTTCAAGATTGAAAAAAGGTATGTATATTTGGAATGATTGGAAATAAACTCACGTGAGAATCCTTGTATCCCAAATACTGACAGTGCCGTCGAATGAACCAGTTATTATTTGATTTCCATCGTTATTGAAGTGTAAAGCGATTATTTCTGCAGTGTGACCTCTCAATATCCCTAATTCCTCACCTGTTAAACGAATTC]
[+] EMBL BI510140 [TTAACACAAATGTCGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCCTTGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGATGAAAGCTAATGCTAGCATATATCTGAAACAAGGATGGTCGAATCACCTTTGGAAACCTCTTCTCGATGACCCTTCATCAAGGCCAGCTGCTTGAAATTGGTGCTCACATCCCAAACTCTGGCCGTGGTGTCGCTGCTCGCAGTGGCCAACTTTTTCCCATTGTTGTCGAAGGTCAGGTCCAGGACCTCGTCATCGTGTCCTCGAAATGTGACCAGGCACGAGTTCATTTTCGTGTCCCACACTTTGGCCGTTTTATCCATCGATGACGAAGCGATCAACGAGCAATCGAAGTTGTAAATGCAGTTTGATAATTCGGATCGATGGCCGATCAACACGCATACGCGACTGGGAAAAAAGATTTTTTTAATTATTATTTTTAATTTTCAAGATTGAAAAAAGGTATGTATATTTGGAATGATTGGAAATTAAaaaaaaa ]
[+] EMBL BI508481 [ CGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCCTGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGATGAAAGCTAATGCTAGCATATATCTGAAACAAGCATGGTCGAATCACCTTTGGAAACCTCTTCTCGATGACCCTTCATCAAGGCCAGCTGCTTGAAATTGGTGCTCACATCCCAAACTCTGGCCGTGGTGTCGCTGCTCGCAGTGGCCAACTTTTTCCCATTGTTGTCGAAGGTCAGGTCCAGGACCTCGTCATCGTGTCCTCGAAATGTGACCAGGCACGAGTTCATTTTCGTGTCCCACACTTTGGCCGTTTTATCCATCGATGACGAAGCGATCAACGAGCAATCGAAGTTGTAAATGCAGTTTGATAATTCGGATCGATGGCCGATCAACACGCATACGCGACTGGGAAAAAAGATTTTTTTAATTATTATTTTTAATTTTCAAGATTGAAAAAAGGTATGTATATTTGGAATGATTGGAAATAAACTCACGTGAGAATCCTTGTATCCCAAATACTGA ]
[+] EMBL BI506419 [ GTGTCGCTGCTCGCAGTGGCCAACTTTTTCCCATTGTTGTCGAAGGTCAGGTCCAGGACCTCGTCATCGTGTCCTCGAAATGTGACCAGGCACGAGTTCATTTTCGTGTCCCACACTTTGGCCGTTTTATCCATCGATGACGAAGCGATCAACGAGCAATCGAAGTTGTAAATGCAGTTTGATAATTCGGATCGATGGCCGATCAACACGCATACGCGACTGGGAAAAAAGATTTTTTTAATTATTATTTTTAATTTTCAAGATTGAAAAAAGGTATGTATATTTGGAATGATTGGAAATAAACTCACGTGAGAATCCTTGTATCCCAAATACTGACAGTGCCGTCGAATGAACCAGTTATTATTTGATTTCCATCGTTATTGAAGTGTAAAGCGATTATTTCTGCAGTGTGACCTCTCAATATCCCTAATTCCTCACCTGTTAAACGAATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_194#0 GTTTAACACAAATGTCGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCC 60
consensus_194#1 --TTAACACAAATGTCGTTGTGGGCTCTTCCCGCGAATTTTGTGCAACTCTTCTACTTCC 58
**********************************************************
consensus_194#0 TGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGAT 120
consensus_194#1 TGGAGGAATATAAGTCCACCAAGCCAGGAAAAAGAAAAGAAGGGATGCTGCTTTGCCGAT 118
************************************************************
consensus_194#0 GAAAGCTAATGCNNGCATATATCTGCTCATATATAAGTTATCATANACGAGGCAGGATCC 180
consensus_194#1 GAAAGCTAATGCTAGCATATATCTG---AAACAAGGATGGTCG-AATCACCTTTGGAAAC 174
************ *********** * * * * ** * * *** *
consensus_194#0 TTCGCCGTCACAAGTTTTGTTCCATAAAATGCATGTTTCATCTATAAGAGCACCGAACAC 240
consensus_194#1 CTCTTCTCGATGACCCTTCATCAAGGCCAGCTGCTTGAAATTGGTGCTCACATCCCAAAC 234
** * * * ** ** * * * ** * ** * * **
consensus_194#0 CATAGGTGCTGGTATTGTGCCTAGAATT--CTAACTTTGATCCATTGTATACCTAAGGCA 298
consensus_194#1 TCTGGCCG-TGGTGTCGCTGCTCGCAGTGGCCAACTTTTTCCCATTGT-TGTCGAAGGTC 292
* * * **** * * ** * * * * ****** ******* * * ****
consensus_194#0 AACGATCTTTGATCGTCTCGAACGACACGAAGTGTCGCAGAAAGTGCAGGCATTGTGCAA 358
consensus_194#1 A--GGTCCAGGACCTCGTCA------TCGTGTCCTCGAAATGTGACCAGGCAC------- 337
* * ** ** * ** ** *** * * ******
consensus_194#0 AGAAAGGTTATAAACATGTTGCAAAATGCTAGAGCGATAAAAGGCCATAGATAAGAGCAT 418
consensus_194#1 ---GAGTTCATTTTCGTGTCCCACACT--TTGGCCGTTTTAT--CCATCGATGACGAAGC 390
** * ** * *** ** * * * * ** * * **** *** *
consensus_194#0 GATGTGCTGCAAGTAGTGTTTATTGCCTCGTAACTAATCACACTATCTGCAGTAGTTAGA 478
consensus_194#1 GAT---CAACGAGCAAT-----------CGAAGTTGTAAATGCAGTTTG--ATAATTCGG 434
*** * * ** * * ** * * * * * ** ** ** *
consensus_194#0 TTCATTGGTGGTGCTCTTATACACGTGCAGTCTGTATATATTTCGACGTTATTTAGTCGC 538
consensus_194#1 ATCGATGGCCG-ATCAACACGCATACGCGACTGGGAAAAA----AGATTTTTTTAATTAT 489
** *** * * ** ** * * * * ** **** *
consensus_194#0 ATTTCTTGATAACATCCTGCATGACAAGGGGAATA-GTACGTGATTCCATCAACTCCGCA 597
consensus_194#1 TATTTTTAAT--TTTCAAGATTGAAAAAAGGTATGTATATTTGGAATGATTGGAAATAAA 547
** ** ** ** * *** ** ** ** ** ** ** *
consensus_194#0 TATTGGACTGAACTCTGATCTCGAGCAGCCGCAGCCATTATTGCACGTGTTATCCAATGA 657
consensus_194#1 CTCACGTGAGAATCCTTGTATCC--CAAATACTGACAGTGCCGT-CGAATGAACCAGTTA 604
* *** ** * ** ** * * ** * * ** * * *** * *
consensus_194#0 AAATGTTTTTTTGGTC-TGGTTCGAATAAGGTATAGTGACTCCTGCGAAGTTTAAATTCG 716
consensus_194#1 TTATTTGATTTCCATCGTTATTGAAGTGTAAAGCGATTATTTCTGC--AGTGTGACCTCT 662
** * *** ** * ** * * * * * **** *** * * **
consensus_194#0 GACAATTCAGAACGAAGCACAAAGGTGAAAGCGATGCAGGACGCGGTTGCCAGTATA 773
consensus_194#1 CAATATCCCTAATTCCTCACC--TGTTAAACGAATTC-------------------- 697
* ** * ** *** ** *** ** *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |