These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1942#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 489 fasta sequence [ACGCATTGATGGGAAAAGTAGAGTATCGACGTTACCGATGATCGATCAAATCGAAGCCACGAGATGAAAGATAGAGAAAGAGAATGGGAAGAACGATGAAGCGTATGAAGAAAAAAAAAAAAGAAGAAGAAGAAGAAAAGAAAAGAAAGGAAAGGAAAGGAAAGGAAAAAGAGAATAACTAAATAATTCGTTGCTCACGAATGCTCATTCATTGTTTTTATCCAGCGCGGTGTTTACGAGTAAGTCGTAAGCCGGACGCTTTAGTGAGAGTAAATTTAATCGTTCGAGTGTACTTTTCAATTATCACGCTCAAAACGTTCAAGCATTTAAGCTGTTCACGAGATTCAGGGTCTTAGAGATTAATTAGACGAGATGGTAGAAAAAATTGTCGAGTCGTTCGTAATAAAAATTAAAGAGATTAAGAGAAATTAAAGGAGAAAAAAAATGAAAATGTTAATTCGTAAAAATAAAAACAAGATGTAAAAAAAA] [+] EMBL BI504568 [ACGCATTGATGGGAAAAGTAGAGTATCGACGTTACCGATGATCGATCAAATCGAAGCCACGAGATGAAAGATAGAGAAAGAGAATGGGAAGAACGATGAAGCGTATGAAGAAAAAAAAAAAAGAAGAAGAAGAAGAAAAGAAAAGAAAGGAAAGGAAAGGAAAGGAAAAAGAGAATAACTAAATAATTCGTTGCTCACGAATGCTCATTCATTGTTTTTATCCAGCGCGGTGTTTACGAGTAAGTCGTAAGCCGGACGCTTTAGTGAGAGTAAATTTAATCGTTCGAGTGTACTTTTCAATTATCACGCTCAAAACGTTCAAGCATTTAAGCTGTTCACGAGATTCAGGGTCTTAGAGATTAATTAGACGAGATGGTAGAAAAAATTGTCGAGTCGTTCGTAATAAAAATTAAAGAGATTAAGAGAAATTAAAGGAGAAAAAAAATGAAAATGTTAATTCGTAAAAATAAAAACAAGATGTAAAAAAAA] consensusID : consensus_1942#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 419 fasta sequence [AGAAATATACACGCTCAGACACCGGGAAAGGGGAGTGTTTTCGTTCACGTTTCACGGGGATCTTTTCGTTTGATCGTTTTGTTTCCAGGGATACGTGTTAAGAACATTTTACACGCGTTACACTTGCTACGCTACGCATTGATGGGAAAAGTAGAGTATCGACGTTACCGATGATCGATCAAATCGAAGCCACGAGATGAAAGATAGAGAAAGAGAATGGGAAATGACGAGAATAAAAAAAAGAAGGAGAGAACGACGTTTAAATTCAGAGGGATTGTGACGATTATTACCCGTATTTATTCTTCGTTTTAACAATCGTGTCGATGATTAATTATGCTGATATCGCAGGGTGATTTTAATTGTACGTGCTGCCGAAATGTTTCCACCTTCTTGAACTCGATGAAAGAGAAACGAGAGAT] [+] EMBL BI516630 [AGAAATATACACGCTCAGACACCGGGAAAGGGGAGTGTTTTCGTTCACGTTTCACGGGGATCTTTTCGTTTGATCGTTTTGTTTCCAGGGATACGTGTTAAGAACATTTTACACGCGTTACACTTGCTACGCTACGCATTGATGGGAAAAGTAGAGTATCGACGTTACCGATGATCGATCAAATCGAAGCCACGAGATGAAAGATAGAGAAAGAGAATGGGAAATGACGAGAATAAAAAAAAGAAGGAGAGAACGACGTTTAAATTCAGAGGGATTGTGACGATTATTACCCGTATTTATTCTTCGTTTTAACAATCGTGTCGATGATTAATTATGCTGATATCGCAGGGTGATTTTAATTGTACGTGCTGCCGAAATGTTTCCACCTTCTTGAACTCGATGAAAGAGAAACGAGAGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1942#0 ----------ACGCATTGATG--GGAAAAGTAGAGTATCGACGTTACCGATGATCGATCA 48 consensus_1942#1 AGAAATATACACGCTCAGACACCGGGAAAGGGGAGTGTTTTCGTTCACGTTTCACGGGGA 60 **** ** ** **** **** * **** ** * ** * consensus_1942#0 AATCGAAGCC--ACGAGATGAAAGATAGAGAAAGAGAATGGGAAGAACGATGAAGCGTAT 106 consensus_1942#1 TCTTTTCGTTTGATCGTTTTGTTTCCAGGGATACGTGTTAAGAACATTTTACACGCGTTA 120 * * * * ** ** * * *** * * **** consensus_1942#0 GAAGAAAAAAAAAAAAGAAGAAGAAGAAGAAAAGAAAAGAAAGGAAAGGAAAGGAAAGGA 166 consensus_1942#1 CACTTGCTACGCTACGCATTGATGGGAAAAGTAGAGTATCGACGTTACCGATGATCGATC 180 * * * * * *** * *** * * * * * * consensus_1942#0 AAAAGAGAATAACTAAATAATTCGTTGCTCACGAATGCTCATTCATTGTTTTTATCCAGC 226 consensus_1942#1 AAATCGAAGCCACGAGATGAAAGATAGAGAAAGAGAA-TGGGAAATGACGAGAATAAAAA 239 *** * ** * ** * * * * ** * ** ** * consensus_1942#0 GCGGTGTTTACGAGTAAGTCGTAAGCCGGACGCTTTAGTGAGAGTAAATTTAATCGTTCG 286 consensus_1942#1 AAAGAAGGAGAGAACGACGTTTAAATTCAG------AGGGATTGTGACGATTATTACCCG 293 * ** * *** ** ** ** * * ** ** consensus_1942#0 AGTGTACTTTTCAATTATCACGCTCAAAACGTTCAAGCATTTAAGCTGTTCACGAGATTC 346 consensus_1942#1 TATTTATTCTTCG-TTTTAACAATCGTGTCGAT-GATTAATTATGCTGATATCG-----C 346 * ** * *** ** * ** ** ** * * * *** **** * ** * consensus_1942#0 AGGGTCTTAGAGATTAATTAGACGAGATGGTAGAAAAAATTGTCGAGTCGTTCGTAATAA 406 consensus_1942#1 AGGGT----GATTTTAATTGTACGTGCTGCCGAAA-----TGTTTCCACCTTCTTGAACT 397 ***** ** ****** *** * ** ** *** * *** * * consensus_1942#0 AAATTAAAGAGATTAAGAGAAATTAAAGGAGAAAAAAAATGAAAATGTTAATTCGTAAAA 466 consensus_1942#1 CGATGAAAGAGAA-ACGAGAGAT------------------------------------- 419 ** ******* * **** ** consensus_1942#0 ATAAAAACAAGATGTAAAAAAAA 489 consensus_1942#1 ----------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |