These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1948#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 397 fasta sequence [GAGAAAAAAAGTTGCTGGTTTTATGCGACAATTATCTATTAGCAACTTGGCAGGAGCTGTAGAAAATATAAGTCAAGGAGAACAAACTTTGCGTAGTCCAAGATCATTAACACAAGATTTTACAAGCGGTTGTTTTATTACACGATATCTTGATGGTTTGGAAACTAAGCAAGAAGGACCAGCAATTTTGCATGGTAGAAATCCAGAAGAATTACCAATTAAACAACTTGGAAATTTTCAGGAAGATAAAGATATAGTAGCTGCTCATACTGGCCCAGATAATGGACTTACAACTGTTAATATACAACAAAGACATTTAAGTATTAATGATATTGATATTGATTACATTGATATGTTAGATCAAGGAGAACAATATAGAAATACATCAACAACAACG] [+] EMBL BI517236 [GAGAAAAAAAGTTGCTGGTTTTATGCGACAATTATCTATTAGCAACTTGGCAGGAGCTGTAGAAAATATAAGTCAAGGAGAACAAACTTTGCGTAGTCCAAGATCATTAACACAAGATTTTACAAGCGGTTGTTTTATTACACGATATCTTGATGGTTTGGAAACTAAGCAAGAAGGACCAGCAATTTTGCATGGTAGAAATCCAGAAGAATTACCAATTAAACAACTTGGAAATTTTCAGGAAGATAAAGATATAGTAGCTGCTCATACTGGCCCAGATAATGGACTTACAACTGTTAATATACAACAAAGACATTTAAGTATTAATGATATTGATATTGATTACATTGATATGTTAGATCAAGGAGAACAATATAGAAATACATCAACAACAACG] consensusID : consensus_1948#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 390 fasta sequence [TTGCTTTTTTTTTTTTTTTAATGAAAAAATTTATTTCATGAAGAATATTTATAGATAAAACTTAAAACATTTCTTAATATAGAAATCTTGTTATTCTTGTAAACATAATGAAGTAAAAACTTTATTCATAAAGGAATTCGGTTATTGACACACTATCAATATGGCGGTAAAGTGGAAAACGATGTGCTTTTCAGTTTAAACAAGGATGTGCTTTTAAAAATAAAATCATGATTTAAATATACTGATATATATCAGTTGTCTTATAAAGTCATGTTAAATGATATTTGGTATTAATCATTTCACTTGCATTTAAATTTAATTTTTAATTAAAAGAATGCCAAGTTTGAGAAAAAAAGTTGCTGGTTTTATGCGACAATTATCTATTAGCAA] [+] EMBL BI509399 [TTGCTTTTTTTTTTTTTTTAATGAAAAAATTTATTTCATGAAGAATATTTATAGATAAAACTTAAAACATTTCTTAATATAGAAATCTTGTTATTCTTGTAAACATAATGAAGTAAAAACTTTATTCATAAAGGAATTCGGTTATTGACACACTATCAATATGGCGGTAAAGTGGAAAACGATGTGCTTTTCAGTTTAAACAAGGATGTGCTTTTAAAAATAAAATCATGATTTAAATATACTGATATATATCAGTTGTCTTATAAAGTCATGTTAAATGATATTTGGTATTAATCATTTCACTTGCATTTAAATTTAATTTTTAATTAAAAGAATGCCAAGTTTGAGAAAAAAAGTTGCTGGTTTTATGCGACAATTATCTATTAGCAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1948#0 GAGAAAAAAAGTTGCTGGTTTTATGCGACAATTA--TCTATTAGCAAC-TTGGCAGGAGC 57 consensus_1948#1 --TTGCTTTTTTTTTTTTTTTAATGAAAAAATTTATTTCATGAAGAATATTTATAGATAA 58 ** * *** *** * **** * ** * ** ** ** consensus_1948#0 TGTAGAAAATATAAGTCAAGGAGAACAAACTTTGCGTAGTCCAAG-ATCATTAACACAAG 116 consensus_1948#1 AACTTAAAACATTTCTTAATATAGAAATCTTGTTATTCTTGTAAACATAATGAAGTAAAA 118 **** ** * ** * * * * * * ** ** ** ** ** consensus_1948#0 ATTTTA--CAAGCGGTTGTTTTATTACACGATATCTTGATGGTTTGGAAACTAAGCAAGA 174 consensus_1948#1 ACTTTATTCATAAAGGAATTCGGTTAT-TGACACACTATCAATATGGCGGTAAAGT--GG 175 * **** ** * ** *** ** * * * *** *** * consensus_1948#0 AGGACCAGCAATTTTGCATGGTAGAAATCCAGAAGAATTACCAATTAAACAACTTGGAAA 234 consensus_1948#1 AAAACGATGTGCTTTTCA--GTTTAAACAAGGATGTGCTTTTAA--AAATAAAATCATGA 231 * ** * *** ** ** *** ** * * ** *** ** * * consensus_1948#0 TTTTCAGGAAGATAAAGATATAGTAGCTG-CTCATACTGGCCCAGATAATGG-ACTTACA 292 consensus_1948#1 TTT--AAATATACTGATATATATCAGTTGTCTTATAAAGTCATGTTAAATGATATTTGGT 289 *** * * * * ***** ** ** ** *** * * **** * ** consensus_1948#0 ACTGTTAATATA--CAACAAAGACATTTAAGTATTAATGATATTGATATTGATTACATTG 350 consensus_1948#1 ATTAATCATTTCACTTGCATTTAAATTTAATTTTTAATTAAAAGAATGCCAAGT---TTG 346 * * * ** * ** * ****** * ***** * * ** * * *** consensus_1948#0 ATATGTTAGATCAAGGAGAACAATATAGAAATACATCAACAACAACG 397 consensus_1948#1 AGAAAAAAAGTTGCTG-GTTTTATGCGACAATTATCTATTAGCAA-- 390 * * * * * * ** *** * * *** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |