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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1973#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 483 fasta sequence
[AACAGCAGCGGTGACCTTGCCGGCGACATTCCGCCCGCCAGATATTCCAACGAAGGCACCTCGAGCAGGCTCAATTACACCCCCTCGTCCGACCAGGATTACGGGACGCTGGCCTGTTGGGCGAGTAACGCGGTTGGCCCCTCCAAACAGCCCTGCCTCTACCAAGTGATCGCAGCAGGCAGGCCGTACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCNNNTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTANNNTGGAAGGGGAAGCGTTAAAAGGAGTGGCCAAGTTCACCGGGGAATCGGGATCCTCGGTGGACATGTCACCGATCC]
[+] EMBL BI510036 [AACAGCAGCGGTGACCTTGCCGGCGACATTCCGCCCGCCAGATATTCCAACGAAGGCACCTCGAGCAGGCTCAATTACACCCCCTCGTCCGACCAGGATTACGGGACGCTGGCCTGTTGGGCGAGTAACGCGGTTGGCCCCTCCAAACAGCCCTGCCTCTACCAAGTGATCGCAGCAGGCAGGCCGTACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCNNNTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTANNNTGGAAGGGGAAGCGTTAAAAGGAGTGGCCAAGTTCACCGGGGAATCGGGATCCTCGGTGGACATGTCACCGATCC]
consensusID : consensus_1973#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 475 fasta sequence
[ACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCGTACTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTATCATGGAAGGGGAAGCGTTAAAAGGAGTGGACATGTCACCGATCCTGATCGGGCTGGGCGGAACCGCGACTGGATTAGGCTTGATCGTGACAGGTGTATTGATGGCGCTTTGGAGGAAACACGCGGCAACCCCGGCGAAAGCGAAATCGCCCCCCCAACAGCCGAGCATCGCGACATTCGCCGGGAAGGGCGAGGAGGAAGACGGGAATCCTGATCTAATACCCACCACAGCCTTGACCAATCACCTCACAGATAG]
[+] EMBL BI511478 [ACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGGATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGACAAGCAACGGTTAGAATCGTCGAACCCGTACTGGGAGTTGGAGCTTCGGAAACCGGCAACTGTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTATCATGGAAGGGGAAGCGTTAAAAGGAGTGGACATGTCACCGATCCTGATCGGGCTGGGCGGAACCGCGACTGGATTAGGCTTGATCGTGACAGGTGTATTGATGGCGCTTTGGAGGAAACACGCGGCAACCCCGGCGAAAGCGAAATCGCCCCCCCAACAGCCGAGCATCGCGACATTCGCCGGGAAGGGCGAGGAGGAAGACGGGAATCCTGATCTAATACCCACCACAGCCTTGACCAATCACCTCACAGATAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1973#0 AACAGCAGCGGTGACCTTGCCGGCGACATTCCGCCCGCCAGATATTCCAACGAAGGCACC 60
consensus_1973#1 ------------------------------------------------------------
consensus_1973#0 TCGAGCAGGCTCAATTACACCCCCTCGTCCGACCAGGATTACGGGACGCTGGCCTGTTGG 120
consensus_1973#1 ------------------------------------------------------------
consensus_1973#0 GCGAGTAACGCGGTTGGCCCCTCCAAACAGCCCTGCCTCTACCAAGTGATCGCAGCAGGC 180
consensus_1973#1 ------------------------------------------------------------
consensus_1973#0 AGGCCGTACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGG 240
consensus_1973#1 -------ACCCGTTGCAGAATTGCACGGCCGGCTACAATCAGACCGGCTCCTGGATCCGG 53
*****************************************************
consensus_1973#0 ATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGAC 300
consensus_1973#1 ATATCGTGCGTGGAGGGATACGACGGTGGACTGCCGCAAAAATTCGTCGCGATCGTGGAC 113
************************************************************
consensus_1973#0 AAGCAACGGTTAGAATCGTCGAACCCNNN-TGGGAGTTGGAGCTTCGGAAACCGGCAACT 359
consensus_1973#1 AAGCAACGGTTAGAATCGTCGAACCCGTACTGGGAGTTGGAGCTTCGGAAACCGGCAACT 173
************************** ******************************
consensus_1973#0 GTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTANNNTGGAAGGGGAA 419
consensus_1973#1 GTCGCCCTCTACGCGGTAAACGTGAAGGGATCCAGCGATCCGGTTATCATGGAAGGGGAA 233
********************************************** ***********
consensus_1973#0 GCGTTAAAAGGAGTGGCCAAGTTCACCGGGG--AATCGGGATCCTCGGTGGACATGTCAC 477
consensus_1973#1 GCGTTAAAAGGAGTGGACATGT-CACCGATCCTGATCGGG---CTGGGCGGAACCGCGAC 289
**************** ** ** ***** ****** ** ** *** * **
consensus_1973#0 CGATCC------------------------------------------------------ 483
consensus_1973#1 TGGATTAGGCTTGATCGTGACAGGTGTATTGATGGCGCTTTGGAGGAAACACGCGGCAAC 349
*
consensus_1973#0 ------------------------------------------------------------
consensus_1973#1 CCCGGCGAAAGCGAAATCGCCCCCCCAACAGCCGAGCATCGCGACATTCGCCGGGAAGGG 409
consensus_1973#0 ------------------------------------------------------------
consensus_1973#1 CGAGGAGGAAGACGGGAATCCTGATCTAATACCCACCACAGCCTTGACCAATCACCTCAC 469
consensus_1973#0 ------
consensus_1973#1 AGATAG 475
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |