These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2029#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 576 fasta sequence [GTCCAAGTTTTAGCAAAAACTGTTTGATAATAAGCGTTTCGAAATGCGAATACAGTTTGCCAAAGTAACTAAATAAGTCTTTTAAGCTAGTGTTTGTCGAAACAATTGGGTCTTTCAAGCTTGCTGAAATAATTCAGTGGTATGTAGTGGTGAACGAATATATATGCAAAAATTATCCTAGTTTTATCCAGTTGAACTTTATCTTTCGATATTACGTTTAATAAAATTATATGTTTATCGCCATGTTTATAACATTATTCAACTTCAAGTCGTATACACAAATGGTTAAAAAAAATTAGATCCTTCCTAGGACAAATTCCAAAATTCATTTTTTAATTCAAACTTTCCAAACTCCAAAATTAACAAATCCTCGTATATAGAAACGCAGCCAATTTCCAACTTTCGTTACATATTATATACCTTACACGATACCAACCTTCCTACGATTATTCTTCCCAGACCAGGGACCAACTGCGACGTTCCCTCGTTACCGTCAACAAGCTTCCCAACTTTCAACTTCCCCTGTACTCTCAAAACTACTCGAAACAATAACATTCGTCGTGGAAATTAGCACGT] [+] EMBL BI510294 [GTCCAAGTTTTAGCAAAAACTGTTTGATAATAAGCGTTTCGAAATGCGAATACAGTTTGCCAAAGTAACTAAATAAGTCTTTTAAGCTAGTGTTTGTCGAAACAATTGGGTCTTTCAAGCTTGCTGAAATAATTCAGTGGTATGTAGTGGTGAACGAATATATATGCAAAAATTATCCTAGTTTTATCCAGTTGAACTTTATCTTTCGATATTACGTTTAATAAAATTATATGTTTATCGCCATGTTTATAACATTATTCAACTTCAAGTCGTATACACAAATGGTTAAAAAAAATTAGATCCTTCCTAGGACAAATTCCAAAATTCATTTTTTAATTCAAACTTTCCAAACTCCAAAATTAACAAATCCTCGTATATAGAAACGCAGCCAATTTCCAACTTTCGTTACATATTATATACCTTACACGATACCAACCTTCCTACGATTATTCTTCCCAGACCAGGGACCAACTGCGACGTTCCCTCGTTACCGTCAACAAGCTTCCCAACTTTCAACTTCCCCTGTACTCTCAAAACTACTCGAAACAATAACATTCGTCGTGGAAATTAGCACGT] consensusID : consensus_2029#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence [AACTACTCGAAACAATAACATTCGTCGTGGAAATTAGCACGTCTACACAAACCACCCTGCAATACCACAAGTGATCAATCGAGTGGATTCGAGGCGACTCGTACACATATATATATATATATACATATATCGTGGATGTTCGATTCGTTCGTTGTGAATGAAAAGGGGAGGGAAAGAGAGAAATTCGAAACAATGAATATGAAAAGAAGAAGAGAGAAAGAAAGAAAGAAAGAAATCGGCGCGACTGTCAGACTGAAAGTTTTGTGATTTTGCATGGCATGTGTACATAGGATGAAACCGAGAAAAAGAGGAAATGAAGGAAACAAAAGAGCCTCTATGTGTAGATTCAACGTGTAGGTGAGAAAGGTTTAAAAAGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BI504314 [AACTACTCGAAACAATAACATTCGTCGTGGAAATTAGCACGTCTACACAAACCACCCTGCAATACCACAAGTGATCAATCGAGTGGATTCGAGGCGACTCGTACACATATATATATATATATACATATATCGTGGATGTTCGATTCGTTCGTTGTGAATGAAAAGGGGAGGGAAAGAGAGAAATTCGAAACAATGAATATGAAAAGAAGAAGAGAGAAAGAAAGAAAGAAAGAAATCGGCGCGACTGTCAGACTGAAAGTTTTGTGATTTTGCATGGCATGTGTACATAGGATGAAACCGAGAAAAAGAGGAAATGAAGGAAACAAAAGAGCCTCTATGTGTAGATTCAACGTGTAGGTGAGAAAGGTTTAAAAAGAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2029#0 GTCCAAGTTTTAGCAAAAACTGTTTGATAATAAGCGTTTCGAAATGCGAATACAGTTTGC 60 consensus_2029#1 ------------------------------------------------------------ consensus_2029#0 CAAAGTAACTAAATAAGTCTTTTAAGCTAGTGTTTGTCGAAACAATTGGGTCTTTCAAGC 120 consensus_2029#1 ---------------------------------------------------------AAC 3 * * consensus_2029#0 TTGCTGAAATAATTCAGTGGTATGTAGTGGTGAACGAATATATATGCAAAAATTATCCTA 180 consensus_2029#1 TACTCGAAACAAT---AACATTCGTCGTGG-AAATTAGCACGTCTACACAAACCACCCTG 59 * **** *** * ** **** ** * * * * ** *** * *** consensus_2029#0 GTTTTATCCAGTTGAACTTTATCTTTCGATATTACGTTTAATAAAATTATATGTTTATCG 240 consensus_2029#1 CAATACCACAAGTGA--TCAATCGAGTGGATTCGAGGCGACTCGTAC-ACATATATATAT 116 * ** *** * *** * * * * * * * ** * *** consensus_2029#0 CCATGTTTATAACATTATTCAACTTCAAGTCGTATACACAAATGGTTAAAAAAAATTAGA 300 consensus_2029#1 ATATATACATA-TATCGTGGATGTTCGATTCGTTCGTTGTGAATGAAAAGGGGAGGGAAA 175 ** * *** ** * * *** * **** * * ** * * * consensus_2029#0 TCCTTCCTAGGACAAATTCCAAA-ATTCATTTTTTAATTCAAACTTTCCAAACTCCAAAA 359 consensus_2029#1 --------GAGAGAAATTCGAAACAATGAATATGAAAAGAAGAAGAGAGAAAGAAAGAAA 227 ** ****** *** * * * * * ** * * *** *** consensus_2029#0 TTAACAAATCCTCGTATATAGAAACGCAGCCAATTTCCAACTTTCGTTACATATTATATA 419 consensus_2029#1 GAAAGAAATCGGCGCG-ACTGTCAGACTGAAAGTTTTGTGATTTTGC-ATGGCATGTGTA 285 ** ***** ** * * * * * * *** *** * * * * ** consensus_2029#0 CCTTACACGATACCAACCTTCCTACGATTATTCTTCCCAGACCAGGGACCAACTGCGACG 479 consensus_2029#1 CATAGGATGAAACCGAGAAAAAGAGGAA-ATGAAGGAAACAAAAGAGCCTCTATGTGTAG 344 * * * ** *** * * ** ** * * ** * * ** * * consensus_2029#0 TTCCCTCGTTACCGTCAACAAGCTTCCCAACTTTCAACTTCCCCTGTACTCTCAAAACTA 539 consensus_2029#1 ATTCAACGTGTAGGTGAGAAAGGTT--TAAAAAGAAACAAAAAAAAAAAAAAAAAAAAAA 402 * * *** ** * *** ** ** *** * **** * consensus_2029#0 CTCGAAACAATAACATTCGTCGTGGAAATTAGCACGT 576 consensus_2029#1 AAAAAAAAAAAAA------------------------ 415 *** ** ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |