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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2155#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 508 fasta sequence
[ATGTCTCTTAATGAATGTTACCGAAGAGGAGTTGAACAACGGNNNGAAGCAAATATCGACCATTGCTAGAGGAATAATACCGGAACTCGAATTTCCAGAAGCAGAAGAGGCGTTAAGGGCTACGAAGAAACTGCTAGTGGTAAGGCACCCATTTGAAAGATTGTTGAGCGCGTATCGCGATAAACTGGAAAACTCTGTGGCTGGAAGGGAACACGGGACACTTCACTTTTATCAGAAATATGGTAGCAAGATTGTTGAAAAGTACCGTGAGGCAAACTTCACACGGCCCAAAAGGAATCAGGAGATCAGACAGAAAGGCGTACCTCCACCGGCGGGAATTGAACCAACTTTCCGTGAATTCGTGCAATATTTAATTCATACTGATTTGCCTAATTATGGAGATGATCATTGGATGCCATATTATTGGTTCTGTGCACTTTGCATTGTAGATTATGACATAATTGCAAANNTAGAATTCATATGGATTAATTTTACGATTAAATTTTGG]
[+] EMBL BI512069 [ATGTCTCTTAATGAATGTTACCGAAGAGGAGTTGAACAACGGNNNGAAGCAAATATCGACCATTGCTAGAGGAATAATACCGGAACTCGAATTTCCAGAAGCAGAAGAGGCGTTAAGGGCTACGAAGAAACTGCTAGTGGTAAGGCACCCATTTGAAAGATTGTTGAGCGCGTATCGCGATAAACTGGAAAACTCTGTGGCTGGAAGGGAACACGGGACACTTCACTTTTATCAGAAATATGGTAGCAAGATTGTTGAAAAGTACCGTGAGGCAAACTTCACACGGCCCAAAAGGAATCAGGAGATCAGACAGAAAGGCGTACCTCCACCGGCGGGAATTGAACCAACTTTCCGTGAATTCGTGCAATATTTAATTCATACTGATTTGCCTAATTATGGAGATGATCATTGGATGCCATATTATTGGTTCTGTGCACTTTGCATTGTAGATTATGACATAATTGCAAANNTAGAATTCATATGGATTAATTTTACGATTAAATTTTGG]
consensusID : consensus_2155#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 411 fasta sequence
[AATATGGTAGCAAGATTGTTGAAAAGTACCGTGAGGCAAACTTCACACGGCCCAAAAAGAATCAGGAGATCAGACAGAAAGGCGTACCTCCACCGGCGGGAATTGAACCAACTTTCCGTGAATTCGTGCAATATTTAATTCATACTGATTTGCCTAATTATGGAGATGATCATTGGATGCCATATTATTGGTTCTGTGCACTTTGCATTGTAGATTACGACATAATTGCAAAGGTAGAAACATTATATCAAGATCAAATTTACGCAATTCATAAATTAAATCTTCAAGGGATAATTAAACCAAGATGGCAACATAATCGTAGTCACTCGAATGCATCGAAAATATATTTTAGCCAATTAAATAGAGATATGGTAGAAAAATTATATGAGAAGTTCAAGCTGGATTTTGAAC]
[-] EMBL BI509135 [AATATGGTAGCAAGATTGTTGAAAAGTACCGTGAGGCAAACTTCACACGGCCCAAAAAGAATCAGGAGATCAGACAGAAAGGCGTACCTCCACCGGCGGGAATTGAACCAACTTTCCGTGAATTCGTGCAATATTTAATTCATACTGATTTGCCTAATTATGGAGATGATCATTGGATGCCATATTATTGGTTCTGTGCACTTTGCATTGTAGATTACGACATAATTGCAAAGGTAGAAACATTATATCAAGATCAAATTTACGCAATTCATAAATTAAATCTTCAAGGGATAATTAAACCAAGATGGCAACATAATCGTAGTCACTCGAATGCATCGAAAATATATTTTAGCCAATTAAATAGAGATATGGTAGAAAAATTATATGAGAAGTTCAAGCTGGATTTTGAAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2155#0 ATGTCTCTTAATGAATGTTACCGAAGAGGAGTTGAACAACGGNNNGAAGCAAATATCGAC 60
consensus_2155#1 ------------------------------------------------------------
consensus_2155#0 CATTGCTAGAGGAATAATACCGGAACTCGAATTTCCAGAAGCAGAAGAGGCGTTAAGGGC 120
consensus_2155#1 ------------------------------------------------------------
consensus_2155#0 TACGAAGAAACTGCTAGTGGTAAGGCACCCATTTGAAAGATTGTTGAGCGCGTATCGCGA 180
consensus_2155#1 ------------------------------------------------------------
consensus_2155#0 TAAACTGGAAAACTCTGTGGCTGGAAGGGAACACGGGACACTTCACTTTTATCAGAAATA 240
consensus_2155#1 --------------------------------------------------------AATA 4
****
consensus_2155#0 TGGTAGCAAGATTGTTGAAAAGTACCGTGAGGCAAACTTCACACGGCCCAAAAGGAATCA 300
consensus_2155#1 TGGTAGCAAGATTGTTGAAAAGTACCGTGAGGCAAACTTCACACGGCCCAAAAAGAATCA 64
***************************************************** ******
consensus_2155#0 GGAGATCAGACAGAAAGGCGTACCTCCACCGGCGGGAATTGAACCAACTTTCCGTGAATT 360
consensus_2155#1 GGAGATCAGACAGAAAGGCGTACCTCCACCGGCGGGAATTGAACCAACTTTCCGTGAATT 124
************************************************************
consensus_2155#0 CGTGCAATATTTAATTCATACTGATTTGCCTAATTATGGAGATGATCATTGGATGCCATA 420
consensus_2155#1 CGTGCAATATTTAATTCATACTGATTTGCCTAATTATGGAGATGATCATTGGATGCCATA 184
************************************************************
consensus_2155#0 TTATTGGTTCTGTGCACTTTGCATTGTAGATTATGACATAATTGCAAANNTAGAAT--TC 478
consensus_2155#1 TTATTGGTTCTGTGCACTTTGCATTGTAGATTACGACATAATTGCAAAGGTAGAAACATT 244
********************************* ************** ***** *
consensus_2155#0 ATAT--GGATTAATTTTACG----------ATTAAATTTTGG------------------ 508
consensus_2155#1 ATATCAAGATCAAATTTACGCAATTCATAAATTAAATCTTCAAGGGATAATTAAACCAAG 304
**** *** ** ****** ******* **
consensus_2155#0 ------------------------------------------------------------
consensus_2155#1 ATGGCAACATAATCGTAGTCACTCGAATGCATCGAAAATATATTTTAGCCAATTAAATAG 364
consensus_2155#0 -----------------------------------------------
consensus_2155#1 AGATATGGTAGAAAAATTATATGAGAAGTTCAAGCTGGATTTTGAAC 411
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |