These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2181#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 582 fasta sequence [TTCTTGGTGAACTAGATGGAATTGATGTATTATTACAACAATTAGCATATTATAAAAGACATGATCCTCAAACAGCAGAAGAGCAAGAAATGATGGAAAATTTATTTAATGTATTATGTTCAAGTCTCATGGCAACTGTAAACAGAGATAGATTTTTAAGAGGAGAACGATTGCAACTTATGAATTTAATGTTGCGAGAAAAAAAAAATGTCTAGGAATGGTTCTCTTAAAGTATTAGATCATGCAATGAATGGACCAGATGGAAAAGATAATTGCAGTAAATTTGTTGATATTCTTGGATTAAGAACAATATTTCCTTTATTCATGAAAACGCCAACAAAAAATAGAAAGAGAATGCTTACTGCGGAAGAACACGAAGAACATGTAATATCAATTATAGCAAGTATGCTAAGGAACTGTAAAGGACAACAACGTCAAAGATTGTTGAGTAAATTCACAGAAAATGATTACGAAAAAGTAGATCGATTGATGGAGCTTCATTTTAAATATCTTGAAAAAGTGGAGGAAGTGGAAAAAAATACAAAGGAAGACGAAGATGAAGAAGAATCATACTTAAGAAGA] [+] EMBL BI509962 [TTCTTGGTGAACTAGATGGAATTGATGTATTATTACAACAATTAGCATATTATAAAAGACATGATCCTCAAACAGCAGAAGAGCAAGAAATGATGGAAAATTTATTTAATGTATTATGTTCAAGTCTCATGGCAACTGTAAACAGAGATAGATTTTTAAGAGGAGAACGATTGCAACTTATGAATTTAATGTTGCGAGAAAAAAAAAATGTCTAGGAATGGTTCTCTTAAAGTATTAGATCATGCAATGAATGGACCAGATGGAAAAGATAATTGCAGTAAATTTGTTGATATTCTTGGATTAAGAACAATATTTCCTTTATTCATGAAAACGCCAACAAAAAATAGAAAGAGAATGCTTACTGCGGAAGAACACGAAGAACATGTAATATCAATTATAGCAAGTATGCTAAGGAACTGTAAAGGACAACAACGTCAAAGATTGTTGAGTAAATTCACAGAAAATGATTACGAAAAAGTAGATCGATTGATGGAGCTTCATTTTAAATATCTTGAAAAAGTGGAGGAAGTGGAAAAAAATACAAAGGAAGACGAAGATGAAGAAGAATCATACTTAAGAAGA] consensusID : consensus_2181#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [ACGAATTTTAGCTCAAAGAAGAGCATCCCTCAAAACAATAAGACACATTATGCGAGAATATGCAGGAAATCTTGGCGATGCTGGAGATTCAGAATGGAGAGAAGCAGAACAACAACGTCAAAGATTGTTGAGTAAATTCACAGAAAATGATTACGAAAAAGTAGATCGATTGATGGAGCTTCATTTTAAATATCTTGAAAAAGTGGAGGAAGTGGAAAAAAAATACAAAGGAAGAAAAGAAAAAGAAAATATCGATACAATAAGAATATGATATCTGATTGTTGTTACTTTACATACGTGTAAGTTAAGTTTCATTNNTTCTTTTGTTCTTAACTTTTATTATAAGAAACAGATCAGAAACATTTCTTAGAAATTAAAATAAAACGTTTTCAAAATTAAAATGAATGCGTTCCACAATTTTAAGATTGACGAATAATAATCGCGAATAA] [+] EMBL BI516652 [ACGAATTTTAGCTCAAAGAAGAGCATCCCTCAAAACAATAAGACACATTATGCGAGAATATGCAGGAAATCTTGGCGATGCTGGAGATTCAGAATGGAGAGAAGCAGAACAACAACGTCAAAGATTGTTGAGTAAATTCACAGAAAATGATTACGAAAAAGTAGATCGATTGATGGAGCTTCATTTTAAATATCTTGAAAAAGTGGAGGAAGTGGAAAAAAAATACAAAGGAAGAAAAGAAAAAGAAAATATCGATACAATAAGAATATGATATCTGATTGTTGTTACTTTACATACGTGTAAGTTAAGTTTCATTNNTTCTTTTGTTCTTAACTTTTATTATAAGAAACAGATCAGAAACATTTCTTAGAAATTAAAATAAAACGTTTTCAAAATTAAAATGAATGCGTTCCACAATTTTAAGATTGACGAATAATAATCGCGAATAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2181#0 TTCTTGGTGAACTAGATGGAATTGATGTATTATTACAACAATTAGCATATTATAAAAGAC 60 consensus_2181#1 -------------------------------------ACGAATTTTAGCTCAAAGAAGA- 22 ** * * * * * * **** consensus_2181#0 ATGATCCTCAAACAGCAGAAGAGCAAGAAATGATGGAAAATTTATTTAATGT--ATTATG 118 consensus_2181#1 GCATCCCTCAAA--ACAATAAGACACATTATGCGAGAATATGCAGGAAATCTTGGCGATG 80 ******* ** * ** *** *** ** * *** * *** consensus_2181#0 TTCAAGTCTCATGGCAACTGTAAACAGAGATAGATTTTTAAGAGGAGAACGATTGCAACT 178 consensus_2181#1 CTGGAGATTCAGAATGGAGAGAAGCAGAACAACAACGTCAA-AGATTGTTGAGTA-AATT 138 * ** *** ** **** * * * ** ** ** * ** * consensus_2181#0 TATGAATTTAATGTTGCGAGAAAAAAAAAATGTCTAGGAATGGTTCTCTTAAAGTATTAG 238 consensus_2181#1 CACAGAA--AATGATTACGAAAAAGTAGATCGATTGATGGAGCTTCATTTTAAATATC-- 194 * * **** * **** * * * * * *** ** ** *** consensus_2181#0 ATCATGCAATGAATGGACCAGATGGAAAAGATAATTGCAGTAAATTTGTTGATATTCTTG 298 consensus_2181#1 TTGAAAAAGTGGAGGAAGTGGAAAAAAAATACAAAGGAAGAAAAGAAAAAGAAAATATCG 254 * * * ** * * * ** **** * ** * ** *** ** * * * * consensus_2181#0 GATTAAGAACAATATTTCCTTTATTCATGAAAACGCCAACAAAAAATAGAAAGAGAATGC 358 consensus_2181#1 ATACAATAAGAATATGATATCTGATTGTTGTTACTTTACATACGTGTAAGTTAAGTTTCA 314 ** ** ***** * * * * ** * * ** ** * consensus_2181#0 TTACTGCGGAAGAACACGAAGAACATGTAATATCAATTATAGCAAGTATGCTAAGGAACT 418 consensus_2181#1 TTNNTTCTTTTG-----------TTCTTAACTTTTATTATAAGAAACAGATCAGAAACAT 363 ** * * * *** * ****** ** * * * * consensus_2181#0 GTAAAGGACAACAACGTCAAAGATTGTTGAGTAAATTCACAGAAAATGATTACGAAAAAG 478 consensus_2181#1 TTCTTAGAAATTAAAATAAAACGTTTT----CAAAATTAAAATGAATGCGTTCCACAATT 419 * ** * ** * *** ** * *** * * * **** * * * ** consensus_2181#0 TAGATCGATTGATGGAGCTTCATTTTAAATATCTTGAAAAAGTGGAGGAAGTGGAAAAAA 538 consensus_2181#1 TTAA--GATTGACGAATAATAATCGCGAATAA---------------------------- 449 * * ****** * * * ** **** consensus_2181#0 ATACAAAGGAAGACGAAGATGAAGAAGAATCATACTTAAGAAGA 582 consensus_2181#1 -------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |