Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Apis mellifera
cluster # 22 cluster # 22       Sequences # 13       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_22#0 length = 639 sequences # 13  
consensusID : consensus_22#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 639
fasta sequence 
                              [GGTAGAGAAAAGCAGCGAGCGGGAGAGAGAGAGAGAGAACGAGACGGAGTGAGAGTGTATATCGGTGTGAATGGGAGAGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTNNCCCCTTTCCACCCCCTCCCTCCCTCCT-CAAAAAAAAAACGACACACGAACCACAACCACAACCTCATCCCAATAAAACTAGGGGGGAGCTCGACTCTGCTT]

[+] EMBL BI512330             [GGTAGAGAAAAGCAGCGAGCGGGAGAGAGAGAGAGAGAACGAGACGGAGTGAGAGTGTATATCGGTGTGAATGGGAGAGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTNNAAAAGCACGATGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATC                                                                                                                                                                                                                                          ]
[+] EMBL BI516562             [             AGCGAGCGGGAGAGAGAGAGAGAGAACGAGACGGAGTGAGAGTGTATATCGGTGTGAATGGGAGAGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACC                                                                                                                                                           ]
[+] EMBL BI512292             [                   CGGGAGAGAGAGAGAGAGAACGAGACGGAGTGAGAGTGTATATCGGTGTGAATGGGAGAGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCC                                                                                                                                                          ]
[+] EMBL BI516827             [                                                                     AATGGGAGAGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCGGCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTNNCCCCTTTCCACCCCCTCCCTCCCTCCT CAAAAAAAAAACGACACACGAACCACAACCACAACC                                      ]
[+] EMBL BI515394             [                                                                             AGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTNNNCCCTTTCCACCCCCTCCCTCCCTCCT CAAAAAAAAAACGACACACGAACCACAACCACAACCTC                                    ]
[+] EMBL BI512784             [                                                                                                   CTGTGGCAGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTT                                                                                                                       ]
[+] EMBL BI516123             [                                                                                                          AGGGTCCAAAACTTCCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTGCCCCCTTTCCACCCCCTCCCTCCCTCCT CAAAAAAAAAACGACACACGAACCACAACCACAACCTCATCCCAATAAAACTAGTGTGTAGCTCGACTCTGt  ]
[+] EMBL BI517130             [                                                                                                                                           CCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTGCCCCCTTTCCACCCCCTCCCTCCCTCCT CAAAAAAAAAACGACACACGAACC                                                  ]
[+] EMBL BI512509             [                                                                                                                                              AGAGAAGATTCACATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTNNCCCCTTTCCACCCCCTCCCTCCCTCCT CA                                                                        ]
[+] EMBL BI515798             [                                                                                                                                                           ATCGACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTNNCCCCTTTCCACCCCCTCCCTCCCTCCT CAAAAAAAAAACGACACACGAACCACAACCACAACCTC                                    ]
[+] EMBL BI511599             [                                                                                                                                                               ACTCGGGGCAGGATGACCACGTGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTC                                                                                                                      ]
[+] EMBL BI510762             [                                                                                                                                                                                                                                    AACAAGATTCTGAAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAGATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCNNNATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTT                                                                                                                        ]
[+] EMBL BI946441             [                                                                                                                                                                                                                                                                                                                                                      ATCTACATCTCAGGAACACGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCCGGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTTATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTA TTTTTTTCTGCCCCTTTTCCACCCCTTCCTTCCTTCTTAAAAAAAAAAAACGACACACG ACCACAACCACCACCTTATTCCAATAAAACTAGGGGGGAGCTCGACTCTGCTT]




>consensus_22#0
GGTAGAGAAAAGCAGCGAGCGGGAGAGAGAGAGAGAGAACGAGACGGAGTGAGAGTGTAT
ATCGGTGTGAATGGGAGAGAGAGATTGCGCGATCAAATTCTGTGGCAGGGTCCAAAACTT
CCCCCGGCGCGCTACGATTCCGAGAGAAGATTCACATCGACTCGGGGCAGGATGACCACG
TGGTCACCTGGCTGTGAGGGATGAAACTTAGAAAAGCACGACGAAAGGAACAAGATTCTG
AAAACAACGACGAGGACGACGATGACGATGATTATGATGATGATGATGATCACGATGAAG
ATGGAAACTTGGATCGAATGCGGAAAAACGAAAAACGAAAACATCTACATCTCAGGAACA
CGTGGTCACCCTTTGGGATCTGACTTGGTGCACGCCAGGGATCATCCTCTCCTTCGTCCC
GGCGGACACCGCGATCTGTCCGCGGGGACGAAATCGGCCCCCTAATATTTTAGTATCCTT
ATACCCAAATCTCCCCCTCTTCCTCACCAGAATCTCTTTTTCTTTATTTTTTTTCTNNCC
CCTTTCCACCCCCTCCCTCCCTCCTCAAAAAAAAAACGACACACGAACCACAACCACAAC
CTCATCCCAATAAAACTAGGGGGGAGCTCGACTCTGCTT

clustalw multiple alignements is not computed in this case
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)