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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2227#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence
[GACATACTACATCCTGATTTGACCGAAACTTCCGTTTCCGAACGGAAGTCCGCTGAAAGAAGCGTCTCCTTCAATCGAGACGTCCACGTCAAGAGGATCGGACGTGAAGCATCCCGCGTGACCGCGGCTCTGATAGGAGATGGCGAAGGCAGGTTGATTGCCACTCCGATCCATAAGGAGAGCATAGCTTTGAAGAGCAAAGAGGATCTAGCTCAGGAGGCGGCGCTAGTACTTCAACAAGCGGGCAGCCTTCATTGCGTTGCTCATGACAACAGACGATTGCCAGGTCGTTTCAGCACTTTGCCAGTGCGTCGTAACAAAAAAAGGCCAGAACTACCGCTTGATGTAAGACGAAAAAGTGAAGAAATAGTCACGAACAACACAGATCTTATCGACACACCGAAAATAAAGAAAAAAGCATTAGAAAGAAGTATCAGCGATGCAAACATAAAAAAGTTAAAAAGTCCATTGGCCAAATTCTTTTCTCCAAAGTTAGAAAGGAAGCATAAGCCGGTTAGTCGTAGCATCAGTGACGCGGCTAATTTGTTACGGTCCCATCGCAAAAGGAGCGGTAGCGAAAGTGAAGGATCGCATTTGGAGAGTAATCGAGTGAAGAAGCAAT]
[+] EMBL BI503794 [GACATACTACATCCTGATTTGACCGAAACTTCCGTTTCCGAACGGAAGTCCGCTGAAAGAAGCGTCTCCTTCAATCGAGACGTCCACGTCAAGAGGATCGGACGTGAAGCATCCCGCGTGACCGCGGCTCTGATAGGAGATGGCGAAGGCAGGTTGATTGCCACTCCGATCCATAAGGAGAGCATAGCTTTGAAGAGCAAAGAGGATCTAGCTCAGGAGGCGGCGCTAGTACTTCAACAAGCGGGCAGCCTTCATTGCGTTGCTCATGACAACAGACGATTGCCAGGTCGTTTCAGCACTTTGCCAGTGCGTCGTAACAAAAAAAGGCCAGAACTACCGCTTGATGTAAGACGAAAAAGTGAAGAAATAGTCACGAACAACACAGATCTTATCGACACACCGAAAATAAAGAAAAAAGCATTAGAAAGAAGTATCAGCGATGCAAACATAAAAAAGTTAAAAAGTCCATTGGCCAAATTCTTTTCTCCAAAGTTAGAAAGGAAGCATAAGCCGGTTAGTCGTAGCATCAGTGACGCGGCTAATTTGTTACGGTCCCATCGCAAAAGGAGCGGTAGCGAAAGTGAAGGATCGCATTTGGAGAGTAATCGAGTGAAGAAGCAAT]
consensusID : consensus_2227#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[GATCCCAGCTTTTATTAGTTCTTCGGCGCTCGGCGAAGAATGATGTGTGTCAGAATAATGGACGTGAAGCATCCCGCGTGACCGCGGCTCTGATAGGAGATGGCGAAGGCAGGTTGATTGCTACTCCGATCCATAAGGAGAGCATAGCTTTGAAGAGCAAAGAGGATCTAGCTCAGGAGGCGGCGCTAGTACTTCAACAAGCGGGCAGCCTTCATTGCGTTGCTCATGACAACAGACGATTGCCAGGTCGTTTCAGCACTTTGCCAGTGCGTCGTAACAAAAAAAGGCCAGAACTACCGCTTGATGTAAGACGAAAAAGTGAAGAAATAGTCACGAACAACACAGATCTTATCGACACACCGAAAATAAAGAAAAAAGCATTAGAAAGAAGTATCAGCGATGCAAACATAAAAAAGTTAAAAAGTCCATTGGCCAAATTCTTTTCTCCAAAGTTAGAAAGGAAGCATAAGCCGGTTAGTCGTAGCATCAGTGACGCGGCTNNTTTGTTACGGTCCCATCGCAAAAGGAGCGGTAGCGAAAGTGAAGGATCGCATTTGGAGAGTAATCGAGTGAAGAAGCAATTATCCC]
[+] EMBL BI506990 [GATCCCAGCTTTTATTAGTTCTTCGGCGCTCGGCGAAGAATGATGTGTGTCAGAATAATGGACGTGAAGCATCCCGCGTGACCGCGGCTCTGATAGGAGATGGCGAAGGCAGGTTGATTGCTACTCCGATCCATAAGGAGAGCATAGCTTTGAAGAGCAAAGAGGATCTAGCTCAGGAGGCGGCGCTAGTACTTCAACAAGCGGGCAGCCTTCATTGCGTTGCTCATGACAACAGACGATTGCCAGGTCGTTTCAGCACTTTGCCAGTGCGTCGTAACAAAAAAAGGCCAGAACTACCGCTTGATGTAAGACGAAAAAGTGAAGAAATAGTCACGAACAACACAGATCTTATCGACACACCGAAAATAAAGAAAAAAGCATTAGAAAGAAGTATCAGCGATGCAAACATAAAAAAGTTAAAAAGTCCATTGGCCAAATTCTTTTCTCCAAAGTTAGAAAGGAAGCATAAGCCGGTTAGTCGTAGCATCAGTGACGCGGCTNNTTTGTTACGGTCCCATCGCAAAAGGAGCGGTAGCGAAAGTGAAGGATCGCATTTGGAGAGTAATCGAGTGAAGAAGCAATTATCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2227#0 GACATACTACATCCTGATTTGACCGAAACTTCCGTTTCCGAACGGAAGTCCGCTGAAAGA 60
consensus_2227#1 ---------------------------------------GATCCCAGCTTTTATTAGTTC 21
** * * * * *
consensus_2227#0 AGCGTCTCCTTCAATCGAGACGTCCACGTCAAGAGGATCGGACGTGAAGCATCCCGCGTG 120
consensus_2227#1 TTCGGCGCTCGGCGAAGAATGATGTGTGTCAGAATAAT-GGACGTGAAGCATCCCGCGTG 80
** * * ** * **** * ** *********************
consensus_2227#0 ACCGCGGCTCTGATAGGAGATGGCGAAGGCAGGTTGATTGCCACTCCGATCCATAAGGAG 180
consensus_2227#1 ACCGCGGCTCTGATAGGAGATGGCGAAGGCAGGTTGATTGCTACTCCGATCCATAAGGAG 140
***************************************** ******************
consensus_2227#0 AGCATAGCTTTGAAGAGCAAAGAGGATCTAGCTCAGGAGGCGGCGCTAGTACTTCAACAA 240
consensus_2227#1 AGCATAGCTTTGAAGAGCAAAGAGGATCTAGCTCAGGAGGCGGCGCTAGTACTTCAACAA 200
************************************************************
consensus_2227#0 GCGGGCAGCCTTCATTGCGTTGCTCATGACAACAGACGATTGCCAGGTCGTTTCAGCACT 300
consensus_2227#1 GCGGGCAGCCTTCATTGCGTTGCTCATGACAACAGACGATTGCCAGGTCGTTTCAGCACT 260
************************************************************
consensus_2227#0 TTGCCAGTGCGTCGTAACAAAAAAAGGCCAGAACTACCGCTTGATGTAAGACGAAAAAGT 360
consensus_2227#1 TTGCCAGTGCGTCGTAACAAAAAAAGGCCAGAACTACCGCTTGATGTAAGACGAAAAAGT 320
************************************************************
consensus_2227#0 GAAGAAATAGTCACGAACAACACAGATCTTATCGACACACCGAAAATAAAGAAAAAAGCA 420
consensus_2227#1 GAAGAAATAGTCACGAACAACACAGATCTTATCGACACACCGAAAATAAAGAAAAAAGCA 380
************************************************************
consensus_2227#0 TTAGAAAGAAGTATCAGCGATGCAAACATAAAAAAGTTAAAAAGTCCATTGGCCAAATTC 480
consensus_2227#1 TTAGAAAGAAGTATCAGCGATGCAAACATAAAAAAGTTAAAAAGTCCATTGGCCAAATTC 440
************************************************************
consensus_2227#0 TTTTCTCCAAAGTTAGAAAGGAAGCATAAGCCGGTTAGTCGTAGCATCAGTGACGCGGCT 540
consensus_2227#1 TTTTCTCCAAAGTTAGAAAGGAAGCATAAGCCGGTTAGTCGTAGCATCAGTGACGCGGCT 500
************************************************************
consensus_2227#0 AATTTGTTACGGTCCCATCGCAAAAGGAGCGGTAGCGAAAGTGAAGGATCGCATTTGGAG 600
consensus_2227#1 NNTTTGTTACGGTCCCATCGCAAAAGGAGCGGTAGCGAAAGTGAAGGATCGCATTTGGAG 560
**********************************************************
consensus_2227#0 AGTAATCGAGTGAAGAAGCAAT------ 622
consensus_2227#1 AGTAATCGAGTGAAGAAGCAATTATCCC 588
**********************
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |