These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2262#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence [TTTTTTTTTTTGTATGCGTTTGTTTTTTTTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTCCCTTTTTTTATCGTTGTTGTTGTTGTTGCTGTTGTTGTTGCATTGTTATTTTTGCCATCATTAGCATGATCGTATCGTCATTGTTACCATCGATCGTGAATGATAATTTTGTTGCTTGTGATGAGAGAGGAAAGTAAAAAAAGGANGAAAAAGAAAAAGAAAAAAAAGAAAAAAAAAAGACGNNNTAACGCGATAGCAGAAGAAATCATATGTACCTATGTATTTATGTATTATTTATTGACAATTAATAACGACCAGCTGTTTAGGTAGGATATTAAAAT] [+] EMBL BI503707 [TTTTTTTTTTTGTATGCGTTTGTTTTTTTTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTCCCTTTTTTTATCGTTGTTGTTGTTGTTGCTGTTGTTGTTGCATTGTTATTTTTGCCATCATTAGCATGATCGTATCGTCATTGTTACCATCGATCGTGAATGATAATTTTGTTGCTTGTGATGAGAGAGGAAAGTAAAAAAAGGANGAAAAAGAAAAAGAAAAAAAAGAAAAAAAAAAGACGNNNTAACGCGATAGCAGAAGAAATCATATGTACCTATGTATTTATGTATTATTTATTGACAATTAATAACGACCAGCTGTTTAGGTAGGATATTAAAAT] consensusID : consensus_2262#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence [TTTTTTTTGTATNCGTTTGTTTTTCTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTTCCTTTTTTTTTTTTGCGTTGTTGTTGGTGGTTTGTTGTTGTTGCTCCTAAAAAAAAAAAAAAATTCCAAAGGGCGTTGTTTCGATACTTGTCACACACATACACACGACAGACCACGGGTTGGTGGTACAGGGCGTCCTGCGTTCGGGGGTCAATATGATTTATAGCGAGCTGTCCCGCTGGCGTTTTTCTTTTAAACCTATGAAGAAACTAAGAGAATGAATTTATATCTTTTTTTTTTTTTCTTTTCC] [-] EMBL BI505983 [TTTTTTTTGTATNCGTTTGTTTTTCTTCTCACATTTAAGAAACTCGAAACAAGCCCTGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAAGTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTTCCTTTTTTTTTTTTGCGTTGTTGTTGGTGGTTTGTTGTTGTTGCTCCTAAAAAAAAAAAAAAATTCCAAAGGGCGTTGTTTCGATACTTGTCACACACATACACACGACAGACCACGGGTTGGTGGTACAGGGCGTCCTGCGTTCGGGGGTCAATATGATTTATAGCGAGCTGTCCCGCTGGCGTTTTTCTTTTAAACCTATGAAGAAACTAAGAGAATGAATTTATATCTTTTTTTTTTTTTCTTTTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2262#0 TTTTTTTTTTTGTATGCGTTTGTTTTTTTTTCTCACATTTAAGAAACTCGAAACAAGCCC 60 consensus_2262#1 ---TTTTTTTTGTATNCGTTTGTTTTTCTT-CTCACATTTAAGAAACTCGAAACAAGCCC 56 ************ *********** ** ***************************** consensus_2262#0 TGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAA 120 consensus_2262#1 TGACATGATCGCACGTCTCGGATCGTCCCGGCCCGAAAAGTCGCGTGGCAGGTATTTTAA 116 ************************************************************ consensus_2262#0 GTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTCCCTTTTTTTATCGT-TGT 179 consensus_2262#1 GTCACCTTCGTTTATCGTTTTTTTGTTTTACATTTTTTTTTTCCTTTTTTTTTTTTGCGT 176 ***************************************** ********* * * ** consensus_2262#0 TGTTGTTGTTG--CTGTTGTTGTTGCATTGTTATTTTTGCCATCATTAGCATGATCGTAT 237 consensus_2262#1 TGTTGTTGGTGGTTTGTTGTTGTTGCTCCTAAAAAAAAAAAAAAATTCCAAAGGGCGTTG 236 ******** ** ************ * * *** * * *** consensus_2262#0 CGTCATTG-TTACCATCGAT-CGTGAATGATAATTTTGTTGCTTGTGATGAGAGAGGAAA 295 consensus_2262#1 TTTCGATACTTGTCACACACATACACACGACAGACCACGGGTTGGTGGTACAGGGCGTCC 296 ** * ** ** * * ** * * * *** * * * consensus_2262#0 GTAAAAAAAGGANGAAAAAGAAAAAGAAAAAAAAGAAAAAAAAAAGACGNNNT---AACG 352 consensus_2262#1 TGCGTTCGGGGGTCAATATGATTTATAGCGAGCTGTCCCGCTGGCGTTTTTCTTTTAAAC 356 ** ** * ** * * * * * * ** consensus_2262#0 CGATAGCAGAAGAAATCATATGTACCTATGTATTTATGTATTATTTATTGACAATTAATA 412 consensus_2262#1 CTATGAAGAAACTAAGAGAATGAATTTATATCTTTTTTTTTTTTTCTTTTCC-------- 408 * ** ** ** *** * *** * *** * * ** ** ** * consensus_2262#0 ACGACCAGCTGTTTAGGTAGGATATTAAAAT 443 consensus_2262#1 ------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |