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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2398#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence
[TACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTGAATTGTATTATGTACCAATGGCAACAACAGAAGGATGTTTAGTAGCATCTACAAATCGTGGTAGTAGAGCATTGTTAAAATGTGGTGTAACAAGCCGTGTAGTTGCTGATGGAATGACTAGAGGACCAGTTGTGAGATTTCCAAATATTGTTAGAGCAAGTGAAGCTATGGCATGGATGCAAGATCCTGATAATTTTAAAGAAATGAAAAATAGTTTTAATTTAACCAGTAGATTTGCACGTTTGACAAAGATTAATATACGTATTGCTGGCAGGCATTTGTTTATTCGTTTTGTAGCAACTACTGGTGACGCTATGGGAATGAATATGTTATCTAAAGGAACTGAAAAATCATTAAATACAGTGAAAGAACATTTTCCTGATATGGAAATATTATCATTAAGCGGTAATTTTTGCACGGATAAAAAGCCAGCAGCAGTAAATTGGGTTTGTGGTAGAGGCAAAAGTGTGGTTTGCGAAGCAGTTGTACCTGCAGATATTGTTACAAATGTGTTAAAAACATCTGTTCATGCTTTAGNTGATGTGAATATAAGTAAAAATATGATT]
[+] EMBL BI503396 [TACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTGAATTGTATTATGTACCAATGGCAACAACAGAAGGATGTTTAGTAGCATCTACAAATCGTGGTAGTAGAGCATTGTTAAAATGTGGTGTAACAAGCCGTGTAGTTGCTGATGGAATGACTAGAGGACCAGTTGTGAGATTTCCAAATATTGTTAGAGCAAGTGAAGCTATGGCATGGATGCAAGATCCTGATAATTTTAAAGAAATGAAAAATAGTTTTAATTTAACCAGTAGATTTGCACGTTTGACAAAGATTAATATACGTATTGCTGGCAGGCATTTGTTTATTCGTTTTGTAGCAACTACTGGTGACGCTATGGGAATGAATATGTTATCTAAAGGAACTGAAAAATCATTAAATACAGTGAAAGAACATTTTCCTGATATGGAAATATTATCATTAAGCGGTAATTTTTGCACGGATAAAAAGCCAGCAGCAGTAAATTGGGTTTGTGGTAGAGGCAAAAGTGTGGTTTGCGAAGCAGTTGTACCTGCAGATATTGTTACAAATGTGTTAAAAACATCTGTTCATGCTTTAGNTGATGTGAATATAAGTAAAAATATGATT]
consensusID : consensus_2398#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 329 fasta sequence
[TTCACAAATTCCCAGATCTGTAGAAGAATGTCTTAAAATATACAAATCTGAGCTTGGTGCAAATGGATTAACAGATGAAGAAGTAATTCAATTGGTAAAGAACAATCATATAGCTGCTTATCAATTAGAAAAAGCAGTTGGTGATATGGAACGGGGTGTAGAAATCAGGCGTTTTATAATAGGAGAGGCTGGAAATTNCCTTGATTATCTTTCCAATTTGCCATATAAAGATTATGATTATAGTAAAGTATTAGGAGCTTGTTGTGAGAATGTCATGGGATATGTACCAGTACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTG]
[+] EMBL BI511989 [TTCACAAATTCCCAGATCTGTAGAAGAATGTCTTAAAATATACAAATCTGAGCTTGGTGCAAATGGATTAACAGATGAAGAAGTAATTCAATTGGTAAAGAACAATCATATAGCTGCTTATCAATTAGAAAAAGCAGTTGGTGATATGGAACGGGGTGTAGAAATCAGGCGTTTTATAATAGGAGAGGCTGGAAATTNCCTTGATTATCTTTCCAATTTGCCATATAAAGATTATGATTATAGTAAAGTATTAGGAGCTTGTTGTGAGAATGTCATGGGATATGTACCAGTACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2398#0 TACCACTTGGAATTGCTGGTCCATTATTACTTGATGGTGAATTGTATTATGTACCAATGG 60
consensus_2398#1 ---------------------------------------------TTCACAAATTCCCAG 15
* * * *
consensus_2398#0 CAACAACAGAAGGATGTTTAGTAGCATCTACAAATCGTGG--TAGTAGAGCATTGTTAAA 118
consensus_2398#1 -ATCTGTAGAAGAATGTCT--TAAAATATACAAATCTGAGCTTGGTGCAAATGGATTAAC 72
* * ***** **** * ** ** ******** * * ** * ****
consensus_2398#0 ATGTGGTGTAACAAGCCGTGTAGTTGCTGATGGAATGACTAGAGGACCAGTTGTGAGATT 178
consensus_2398#1 AGATG----AAGAAGTAATTCAATTGGTAA-AGAACAATCATATAGCTGCTTATCA-ATT 126
* ** ** *** * * *** * * *** * * * * ** * * ***
consensus_2398#0 TCCAAATATTGTTAGAGCAAGTGAAGCTATGGCATGGATGCAAGATCCTGATAATTTTAA 238
consensus_2398#1 AGAAAAAGCAGTTGGTG-ATATGGAACGGGGTGTAGAAATCAGGCGTTTTATAAT--AGG 183
*** *** * * * ** * * * * * ** * * *****
consensus_2398#0 AGAAATGAAAAATAGTTTTAATTTAACCAGTAGATTTGCACGTTTGACAAAGATTAATAT 298
consensus_2398#1 AGAGGCTGGAAATTNCCTTGATT-ATCTTTCCAATTTGC-CATATAAAGATTATGATTAT 241
*** **** ** *** * * ****** * * * * * ** * ***
consensus_2398#0 A-CGTATTGCTGGCAGGCATTTGTTTATTCGTTTTGTAGCAACTACTGGTGACGCTATGG 357
consensus_2398#1 AGTAAAGTATTAGGAGCTTGTTGTGAGAATGTCATGGGATATGTACCAGTACCACT-TGG 300
* * * * * ** **** ** ** * *** ** * ** ***
consensus_2398#0 GAATG--AATATGTTATCTAAAGGAACTGAAAAATCATTAAATACAGTGAAAGAACATTT 415
consensus_2398#1 AATTGCTGGTCCATTATTACTTGATGGTG------------------------------- 329
* ** * **** * **
consensus_2398#0 TCCTGATATGGAAATATTATCATTAAGCGGTAATTTTTGCACGGATAAAAAGCCAGCAGC 475
consensus_2398#1 ------------------------------------------------------------
consensus_2398#0 AGTAAATTGGGTTTGTGGTAGAGGCAAAAGTGTGGTTTGCGAAGCAGTTGTACCTGCAGA 535
consensus_2398#1 ------------------------------------------------------------
consensus_2398#0 TATTGTTACAAATGTGTTAAAAACATCTGTTCATGCTTTAGNTGATGTGAATATAAGTAA 595
consensus_2398#1 ------------------------------------------------------------
consensus_2398#0 AAATATGATT 605
consensus_2398#1 ----------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |