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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2400#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 428 fasta sequence
[ATGGAACGGCTTTCGAGAGTGGCATGTTATTTTCGATGGATGAGAAACGCGACATCTCATGATGCAAGTGAGGTTGAGGACGAACAGAAAACTATTAAAGTTGAACGATATCGAAATGTCGGATGTAATTTTGAAGCTTCGAGGCGACTTTGTGGTATTTTGGAAAGTATCCTTCTTTGGGAGAATTCTGTGAATAGTATTTCTGTCGTCATCGTATTTAATATACTGTTTTGGGTATTATTGTATTAGAGGTTTGAGGCTTTGCTGCAGCCAGCAGTGCTGCACTGGTCGTTGTTCTCTGTTATAGTACCTTAGAAACTCAAGTTCAAAAAGAAAATAAAGCATTGGATTTAGCTGCCTCTTATGCAAAAACAGAACAAATTGAGAAAATAGGAAAAAAAATAAAAACAGCAATTCATAATTTAAAG]
[+] EMBL BI504796 [ATGGAACGGCTTTCGAGAGTGGCATGTTATTTTCGATGGATGAGAAACGCGACATCTCATGATGCAAGTGAGGTTGAGGACGAACAGAAAACTATTAAAGTTGAACGATATCGAAATGTCGGATGTAATTTTGAAGCTTCGAGGCGACTTTGTGGTATTTTGGAAAGTATCCTTCTTTGGGAGAATTCTGTGAATAGTATTTCTGTCGTCATCGTATTTAATATACTGTTTTGGGTATTATTGTATTAGAGGTTTGAGGCTTTGCTGCAGCCAGCAGTGCTGCACTGGTCGTTGTTCTCTGTTATAGTACCTTAGAAACTCAAGTTCAAAAAGAAAATAAAGCATTGGATTTAGCTGCCTCTTATGCAAAAACAGAACAAATTGAGAAAATAGGAAAAAAAATAAAAACAGCAATTCATAATTTAAAG]
consensusID : consensus_2400#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence
[TTCATTTGTTCTTTGTCAGTCGTTTAAGTCTTAATCCAGCCTTTCGTTTATATTCATTTCTATCTTTCTCACTTTTTGTTCTTTCTTCTCTGTCGTGTCAGCCTATCTCTTTCTTTCTCGATCTTTCTTTCCTTCTCACTCTATTCTCCGATGCAAAGCAGAAGAAACCCCCGCGGTTGCTCGTTCGTTCTCAAAAGTCTTACTCTCGTTGTCACGCGCTAAAAATACTCCCGCACAGTCTTCCGAGGGTGTACCATGCCAAAGGAGTACGGGAATTAGGACGACAAAAGCAGTCAACGTCGACCTGGAACTGTCATGGAACGGCTTTCGAGAGTGGCATGTTATTTT]
[+] EMBL BI503392 [TTCATTTGTTCTTTGTCAGTCGTTTAAGTCTTAATCCAGCCTTTCGTTTATATTCATTTCTATCTTTCTCACTTTTTGTTCTTTCTTCTCTGTCGTGTCAGCCTATCTCTTTCTTTCTCGATCTTTCTTTCCTTCTCACTCTATTCTCCGATGCAAAGCAGAAGAAACCCCCGCGGTTGCTCGTTCGTTCTCAAAAGTCTTACTCTCGTTGTCACGCGCTAAAAATACTCCCGCACAGTCTTCCGAGGGTGTACCATGCCAAAGGAGTACGGGAATTAGGACGACAAAAGCAGTCAACGTCGACCTGGAACTGTCATGGAACGGCTTTCGAGAGTGGCATGTTATTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2400#0 ATGGAACGGCTTTCGAGAGTGGCATGTTATTTTCGATGGATGAGAAACGCGACATCTCAT 60
consensus_2400#1 ------------------------------------------------------------
consensus_2400#0 GATGCAAGTGAGGTTGAGGACGAACAGAAAACTATTAAAGTTGAACGATATCGAAATGTC 120
consensus_2400#1 --TTCATTTGTTCTTT--GTCAGTCGTTTAAGTCTTAATCCAGCCTTTCGTTTATAT-TC 55
* ** ** ** * * * ** * **** * * * ** **
consensus_2400#0 GGATGTAATTTTGAAGCTTCGAGGCGACTTTGTGGTATTTTGGAAAG-TATCCTTCTTTG 179
consensus_2400#1 ATTTCTATCTTTCTCACTTTTTGTTCTTTCTTCTCTGTCGTGTCAGCCTATCTCTTTCT- 114
* ** *** *** * * * * * ** * **** * * *
consensus_2400#0 GGAGAATTCTGTGAATAGTATTTCTGTCGTCATCGTATTTAATATACTGTTTTGGGTATT 239
consensus_2400#1 ------TTCT-----CGATCTTTCTTTCCTTCTCAC-TCTATTCTCCGATGCAAAGCAGA 162
**** * ***** ** * ** * ** * * * * * *
consensus_2400#0 ATTGTATTAGAGGTTTGAGGCTTTGCTGCAGCCAGCAGTGCTGCACTGGTCGTTGTTCTC 299
consensus_2400#1 AGAAACCCCCGCGGTTGCTCGTTCGTTC---TCAAAAGTCTTACTCTCGTTGTCACGCGC 219
* * *** ** * * ** *** * * ** ** ** * *
consensus_2400#0 TGTTA-TAGTACCTTAGAAACTC----AAGTTCAAAAAGAAAATAAAGCATTGGATTTAG 354
consensus_2400#1 TAAAAATACTCCCGCACAGTCTTCCGAGGGTGTACCATGCCAAAGGAGTACGGGAATTAG 279
* * ** * ** * * ** ** * * * ** ** * *** ****
consensus_2400#0 CTGCCTCTTATGCAAAAACAGAACAAATTGAGAAAATAGGAAAAAAAATAAAAACAGCAA 414
consensus_2400#1 G-ACGACAAAAGCAGTCA-ACGTCGACCTGGAACTGTCATGGAACGGCTTTCGAGAGTGG 337
* * * *** * * * * ** * * ** * * **
consensus_2400#0 TTCATAATTTAAAG 428
consensus_2400#1 CATGTTATTTT--- 348
* ****
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |