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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2407#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence
[CGGTGGCCATATTCGTGGGCAAATCGAAAGAGTGGATCCCAGAATTGGTTCGAGCATCGAAGAAATTGAAAGTGAACGCCGGACACGTGCCTGGGACCGATCTTGGACCGGTTATATCGCCTCGATCCAAGGAGAGGATATGCGATCTCGTCGAGTCGGGCGTGAAAGATGGCGCCACGTTAGCTCTCGATGGCAGAGGCCTCGTTGTCCGTGGTTTCGAAAAGGGGAATTTCGTTGGACCGACCGTGTTGACTGATGTGAAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCTCGTGCATTTTCACCGACACTTTGGACGAGGCGATCGATATTATTAACAAAAGCCCTTACGGGAACGGGACTGCTGTATTCACGTCGAATGGTGCAACGGCGAGAGCGTTCGTAAATAGGATCGAAGCTGGTCAAGTTGGCGTAAATGTTCCTATCCCAGTGCCTTTGCCAATGTTCAGTTTCACTGGAAACAAGGGATCATTTTTGGGTGATAATCATTTTTACGGGAAGCACGGTATAAATTTTTACACACAAGTGAAAACGATA]
[+] EMBL BI516782 [CGGTGGCCATATTCGTGGGCAAATCGAAAGAGTGGATCCCAGAATTGGTTCGAGCATCGAAGAAATTGAAAGTGAACGCCGGACACGTGCCTGGGACCGATCTTGGACCGGTTATATCGCCTCGATCCAAGGAGAGGATATGCGATCTCGTCGAGTCGGGCGTGAAAGATGGCGCCACGTTAGCTCTCGATGGCAGAGGCCTCGTTGTCCGTGGTTTCGAAAAGGGGAATTTCGTTGGACCGACCGTGTTGACTGATGTGAAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCTCGTGCATTTTCACCGACACTTTGGACGAGGCGATCGATATTATTAACAAAAGCCCTTACGGGAACGGGACTGCTGTATTCACGTCGAATGGTGCAACGGCGAGAGCGTTCGTAAATAGGATCGAAGCTGGTCAAGTTGGCGTAAATGTTCCTATCCCAGTGCCTTTGCCAATGTTCAGTTTCACTGGAAACAAGGGATCATTTTTGGGTGATAATCATTTTTACGGGAAGCACGGTATAAATTTTTACACACAAGTGAAAACGATA]
consensusID : consensus_2407#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 354 fasta sequence
[TAGAATAAAATATTTTTCGTGTTTGACGTTCGTCATATACCAAATCGCAAGTAACATCGTTAGCATTACATAAATATTTTAAAGTGTACGAATGCTCCAAATTTATCGAATTCTTCATTCTGTTTTTTTTCTTTTTTCCTCTTTTTTTTTTTTTTTTTTTTTTTCTTTAATATCATAATTTATCATTAAATAATGTTACATATAATAACATCGAAACAAAATCTCGCAATATGTTTCAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCNCGTGCATTTTCACCGACACTTTGAACGAGGCGATCGATTTTATTAACAAAAGCCCTTACGGGAACGGGA]
[+] EMBL BI510830 [TAGAATAAAATATTTTTCGTGTTTGACGTTCGTCATATACCAAATCGCAAGTAACATCGTTAGCATTACATAAATATTTTAAAGTGTACGAATGCTCCAAATTTATCGAATTCTTCATTCTGTTTTTTTTCTTTTTTCCTCTTTTTTTTTTTTTTTTTTTTTTTCTTTAATATCATAATTTATCATTAAATAATGTTACATATAATAACATCGAAACAAAATCTCGCAATATGTTTCAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCNCGTGCATTTTCACCGACACTTTGAACGAGGCGATCGATTTTATTAACAAAAGCCCTTACGGGAACGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2407#0 CGGTGGCCATATTCGTGGGCAAATCGAA-AGAGTGGATCCCAGAATTGGT-TCGAGCATC 58
consensus_2407#1 -----------------------TAGAATAAAATATTTTTCGTGTTTGACGTTCGTCATA 37
* *** * * * * * *** * ***
consensus_2407#0 GAAGAAATTGAAAGTGAACGCCGGACACGTGCCTGGGACCGATCTTGGACCGGTTATATC 118
consensus_2407#1 TACCAAATCGCAAGT-AACATCGTTAGCATTACATAAAT--ATTTTAAAGTGTACGAATG 94
* **** * **** *** ** * * * * ** ** * * **
consensus_2407#0 GCCTCGATCCAAGGAGAGGAT-ATGCGATCTCGTCGAGTCGGGCGTGAAAGATGGCGCCA 177
consensus_2407#1 CTCCAAATTTATCGAATTCTTCATTCTGTTTTTTTTCTTTTTTCCTCTTTTTTTTTTTTT 154
* ** * ** * ** * * * * * * * *
consensus_2407#0 CGTTAGCTCTCGATGGCAG-AGGCCTCGTTGTCCG-TGGTTTCGAAAAGGGGAATTTCGT 235
consensus_2407#1 TTTTTTTTTTCTTTAATATCATAATTTATCATTAAATAATGTTACATATAATAACATCG- 213
** * ** * * * * * * * * * * * ** ***
consensus_2407#0 TGGACCGACCGTGTTGACTGATGTGAAGCCTACCATGAAGTGTTACACCGAGGAGATCTT 295
consensus_2407#1 -AAACAAAATCTCGCAATATGTTTCA-GCCTACCATGAAGTGTTACACCGAGGAGATCTT 271
** * * * * * * *********************************
consensus_2407#0 TGGACCCGTTCTCTCGTGCATTTTCACCGACACTTTGGACGAGGCGATCGATATTATTAA 355
consensus_2407#1 TGGACCCGTTCTCNCGTGCATTTTCACCGACACTTTGAACGAGGCGATCGATTTTATTAA 331
************* *********************** ************** *******
consensus_2407#0 CAAAAGCCCTTACGGGAACGGGACTGCTGTATTCACGTCGAATGGTGCAACGGCGAGAGC 415
consensus_2407#1 CAAAAGCCCTTACGGGAACGGGA------------------------------------- 354
***********************
consensus_2407#0 GTTCGTAAATAGGATCGAAGCTGGTCAAGTTGGCGTAAATGTTCCTATCCCAGTGCCTTT 475
consensus_2407#1 ------------------------------------------------------------
consensus_2407#0 GCCAATGTTCAGTTTCACTGGAAACAAGGGATCATTTTTGGGTGATAATCATTTTTACGG 535
consensus_2407#1 ------------------------------------------------------------
consensus_2407#0 GAAGCACGGTATAAATTTTTACACACAAGTGAAAACGATA 575
consensus_2407#1 ----------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |