These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2407#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 575 fasta sequence [CGGTGGCCATATTCGTGGGCAAATCGAAAGAGTGGATCCCAGAATTGGTTCGAGCATCGAAGAAATTGAAAGTGAACGCCGGACACGTGCCTGGGACCGATCTTGGACCGGTTATATCGCCTCGATCCAAGGAGAGGATATGCGATCTCGTCGAGTCGGGCGTGAAAGATGGCGCCACGTTAGCTCTCGATGGCAGAGGCCTCGTTGTCCGTGGTTTCGAAAAGGGGAATTTCGTTGGACCGACCGTGTTGACTGATGTGAAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCTCGTGCATTTTCACCGACACTTTGGACGAGGCGATCGATATTATTAACAAAAGCCCTTACGGGAACGGGACTGCTGTATTCACGTCGAATGGTGCAACGGCGAGAGCGTTCGTAAATAGGATCGAAGCTGGTCAAGTTGGCGTAAATGTTCCTATCCCAGTGCCTTTGCCAATGTTCAGTTTCACTGGAAACAAGGGATCATTTTTGGGTGATAATCATTTTTACGGGAAGCACGGTATAAATTTTTACACACAAGTGAAAACGATA] [+] EMBL BI516782 [CGGTGGCCATATTCGTGGGCAAATCGAAAGAGTGGATCCCAGAATTGGTTCGAGCATCGAAGAAATTGAAAGTGAACGCCGGACACGTGCCTGGGACCGATCTTGGACCGGTTATATCGCCTCGATCCAAGGAGAGGATATGCGATCTCGTCGAGTCGGGCGTGAAAGATGGCGCCACGTTAGCTCTCGATGGCAGAGGCCTCGTTGTCCGTGGTTTCGAAAAGGGGAATTTCGTTGGACCGACCGTGTTGACTGATGTGAAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCTCGTGCATTTTCACCGACACTTTGGACGAGGCGATCGATATTATTAACAAAAGCCCTTACGGGAACGGGACTGCTGTATTCACGTCGAATGGTGCAACGGCGAGAGCGTTCGTAAATAGGATCGAAGCTGGTCAAGTTGGCGTAAATGTTCCTATCCCAGTGCCTTTGCCAATGTTCAGTTTCACTGGAAACAAGGGATCATTTTTGGGTGATAATCATTTTTACGGGAAGCACGGTATAAATTTTTACACACAAGTGAAAACGATA] consensusID : consensus_2407#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 354 fasta sequence [TAGAATAAAATATTTTTCGTGTTTGACGTTCGTCATATACCAAATCGCAAGTAACATCGTTAGCATTACATAAATATTTTAAAGTGTACGAATGCTCCAAATTTATCGAATTCTTCATTCTGTTTTTTTTCTTTTTTCCTCTTTTTTTTTTTTTTTTTTTTTTTCTTTAATATCATAATTTATCATTAAATAATGTTACATATAATAACATCGAAACAAAATCTCGCAATATGTTTCAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCNCGTGCATTTTCACCGACACTTTGAACGAGGCGATCGATTTTATTAACAAAAGCCCTTACGGGAACGGGA] [+] EMBL BI510830 [TAGAATAAAATATTTTTCGTGTTTGACGTTCGTCATATACCAAATCGCAAGTAACATCGTTAGCATTACATAAATATTTTAAAGTGTACGAATGCTCCAAATTTATCGAATTCTTCATTCTGTTTTTTTTCTTTTTTCCTCTTTTTTTTTTTTTTTTTTTTTTTCTTTAATATCATAATTTATCATTAAATAATGTTACATATAATAACATCGAAACAAAATCTCGCAATATGTTTCAGCCTACCATGAAGTGTTACACCGAGGAGATCTTTGGACCCGTTCTCNCGTGCATTTTCACCGACACTTTGAACGAGGCGATCGATTTTATTAACAAAAGCCCTTACGGGAACGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2407#0 CGGTGGCCATATTCGTGGGCAAATCGAA-AGAGTGGATCCCAGAATTGGT-TCGAGCATC 58 consensus_2407#1 -----------------------TAGAATAAAATATTTTTCGTGTTTGACGTTCGTCATA 37 * *** * * * * * *** * *** consensus_2407#0 GAAGAAATTGAAAGTGAACGCCGGACACGTGCCTGGGACCGATCTTGGACCGGTTATATC 118 consensus_2407#1 TACCAAATCGCAAGT-AACATCGTTAGCATTACATAAAT--ATTTTAAAGTGTACGAATG 94 * **** * **** *** ** * * * * ** ** * * ** consensus_2407#0 GCCTCGATCCAAGGAGAGGAT-ATGCGATCTCGTCGAGTCGGGCGTGAAAGATGGCGCCA 177 consensus_2407#1 CTCCAAATTTATCGAATTCTTCATTCTGTTTTTTTTCTTTTTTCCTCTTTTTTTTTTTTT 154 * ** * ** * ** * * * * * * * * consensus_2407#0 CGTTAGCTCTCGATGGCAG-AGGCCTCGTTGTCCG-TGGTTTCGAAAAGGGGAATTTCGT 235 consensus_2407#1 TTTTTTTTTTCTTTAATATCATAATTTATCATTAAATAATGTTACATATAATAACATCG- 213 ** * ** * * * * * * * * * * * ** *** consensus_2407#0 TGGACCGACCGTGTTGACTGATGTGAAGCCTACCATGAAGTGTTACACCGAGGAGATCTT 295 consensus_2407#1 -AAACAAAATCTCGCAATATGTTTCA-GCCTACCATGAAGTGTTACACCGAGGAGATCTT 271 ** * * * * * * ********************************* consensus_2407#0 TGGACCCGTTCTCTCGTGCATTTTCACCGACACTTTGGACGAGGCGATCGATATTATTAA 355 consensus_2407#1 TGGACCCGTTCTCNCGTGCATTTTCACCGACACTTTGAACGAGGCGATCGATTTTATTAA 331 ************* *********************** ************** ******* consensus_2407#0 CAAAAGCCCTTACGGGAACGGGACTGCTGTATTCACGTCGAATGGTGCAACGGCGAGAGC 415 consensus_2407#1 CAAAAGCCCTTACGGGAACGGGA------------------------------------- 354 *********************** consensus_2407#0 GTTCGTAAATAGGATCGAAGCTGGTCAAGTTGGCGTAAATGTTCCTATCCCAGTGCCTTT 475 consensus_2407#1 ------------------------------------------------------------ consensus_2407#0 GCCAATGTTCAGTTTCACTGGAAACAAGGGATCATTTTTGGGTGATAATCATTTTTACGG 535 consensus_2407#1 ------------------------------------------------------------ consensus_2407#0 GAAGCACGGTATAAATTTTTACACACAAGTGAAAACGATA 575 consensus_2407#1 ---------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |