These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2411#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 648 fasta sequence [CAAACGTAAAGATAAGCTTAAATTGCAAGATTATAGTCCATGGTTTTGTAATTTTTTTGAAAAAAACATAGAAATACCTGGTCAATATACTGGTAAAAGAAAACCTATGCCTCAATATCATGCAAAAATTATAAAGTTTGAATCTACTGTAAAAGTAATGCAATCAATACGGAAACCTATTCGAATTACTATGATTGGTAATGATGCAAAGGATTATCATTTTTTAGTAAAATTTGGAGAAGATTTACGACAAGATCAAAGATTACAACAGTTATTTACTATTATGAACAAAACTTTGTATATTAATGCAGCTTGTAGACAAAGACAATTACTTATTGATACTTATCAGGTGATTCCATTGTCTAAAACAATGGGTCTTATACAATGGATAGATAATACAAGATCTTTAAAAGAGTTAATATATTTCACATTATCAACACAAGAAATAAATCAGTATAATTCTATAATTAAAATGTATCAAGAATGGATACAAAAGGCTGCACCTTCTAAAAAATTGGTACATGAAAAGTATAAAGAAGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTAT] [+] EMBL BI503368 [CAAACGTAAAGATAAGCTTAAATTGCAAGATTATAGTCCATGGTTTTGTAATTTTTTTGAAAAAAACATAGAAATACCTGGTCAATATACTGGTAAAAGAAAACCTATGCCTCAATATCATGCAAAAATTATAAAGTTTGAATCTACTGTAAAAGTAATGCAATCAATACGGAAACCTATTCGAATTACTATGATTGGTAATGATGCAAAGGATTATCATTTTTTAGTAAAATTTGGAGAAGATTTACGACAAGATCAAAGATTACAACAGTTATTTACTATTATGAACAAAACTTTGTATATTAATGCAGCTTGTAGACAAAGACAATTACTTATTGATACTTATCAGGTGATTCCATTGTCTAAAACAATGGGTCTTATACAATGGATAGATAATACAAGATCTTTAAAAGAGTTAATATATTTCACATTATCAACACAAGAAATAAATCAGTATAATTCTATAATTAAAATGTATCAAGAATGGATACAAAAGGCTGCACCTTCTAAAAAATTGGTACATGAAAAGTATAAAGAAGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTAT] consensusID : consensus_2411#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence [AGAAGGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTATAGAAAGTTTCATTATAATGCGTGGAAATTTTATCACTTCATATGCTACTATGTGTATTGCGCATTGGATTTTAGGCATTGGAGATCGGCATTTGCAAAATACTGTAATCGTTATGGATTCAGGACGTTGTTTAGGTATCGATTTTGGGCTAGCTTTTGATGCTGGTGTTGATCAAAAAATACCAGAATTAATGCCTTTTCGTTTAACACCTCAAATTCTGGGTTTATTAAAACCTTTCACTGAAAAAGATCTTTTGAAAACAATAATCCATTCATGCTTTACGAGCGATGAGAAATGAACAAGGACCTATTCTTTCTTGCATGGATATTTTTGTTCATGAACCTTTAAATTGGACGGAAAACGTTAATGAAGCATTAAAAGAAAGTGAAGAAAATGTTACAAATATTGAATGGATACCA] [-] EMBL BQ103756 [AGAAGGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTATAGAAAGTTTCATTATAATGCGTGGAAATTTTATCACTTCATATGCTACTATGTGTATTGCGCATTGGATTTTAGGCATTGGAGATCGGCATTTGCAAAATACTGTAATCGTTATGGATTCAGGACGTTGTTTAGGTATCGATTTTGGGCTAGCTTTTGATGCTGGTGTTGATCAAAAAATACCAGAATTAATGCCTTTTCGTTTAACACCTCAAATTCTGGGTTTATTAAAACCTTTCACTGAAAAAGATCTTTTGAAAACAATAATCCATTCATGCTTTACGAGCGATGAGAAATGAACAAGGACCTATTCTTTCTTGCATGGATATTTTTGTTCATGAACCTTTAAATTGGACGGAAAACGTTAATGAAGCATTAAAAGAAAGTGAAGAAAATGTTACAAATATTGAATGGATACCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2411#0 CAAACGTAAAGATAAGCTTAAATTGCAAGATTATAGTCCATGGTTTTGTAATTTTTTTGA 60 consensus_2411#1 ------------------------AGAAGGCAGTGGTAAA-----ATATAATGCTTCAGA 31 *** * ** * * **** ** ** consensus_2411#0 AAAAAACATAGAAATACCTGGTCAATATACTGGTAAAAGAAAACCTATGCCTCAATATCA 120 consensus_2411#1 AGTATATACCAAAATG---AACGAATTTATTAATAAAACTAAATGGGATAGTTTACGCAA 88 * * * * **** *** ** * ***** *** * * * consensus_2411#0 TGCAAAAATTATAAAGTTTGAATCTACTGTAAAAGTAATGCAATCA-ATACGGAAACCT- 178 consensus_2411#1 GACACTAATAGTATTATGTCCATCTATAG--AAAGTTTCATTATAATGCGTGGAAATTTT 146 ** *** ** * * ***** * ***** ** * ***** * consensus_2411#0 ---ATTCGAATTACTATGATTGGTAATGATGCAAAGGATTAT---CATTTTTTAGTAAAA 232 consensus_2411#1 ATCACTTCATATGCTACTATGTGTATTG-CGCATTGGATTTTAGGCATTGGAGATCGGCA 205 * * * * *** ** *** ** *** ***** * **** * * consensus_2411#0 TTTGGAGAAGATTTACGACAAGATCAAAGATTACAACAGTTATTTACTATTATGAACAAA 292 consensus_2411#1 TTTGCAAAATACT---GTAATCGTTATGGATTCAGGACGTTGTTTA--GGTATCGATTTT 260 **** * ** * * * * * * **** *** **** *** * consensus_2411#0 ACTTTGTATATTAATGCAGCTTGTAGACAAAGACAATTACTTATTGATACTTATCAGGTG 352 consensus_2411#1 GGGCTAGCTTTTGATGCTGGTGTTGATCAAAAAATACCAGA-ATTAATGCCTTTTCG--- 316 * * ** **** * * * **** * * * *** ** * * * * consensus_2411#0 ATTCCATTGTCTAAAACAATGGGTCTTATACAATGGATAGATAATACAAGATCTTTAAAA 412 consensus_2411#1 --TTTAACACCTCAAATTCTGGGTTTATTAAAACCTTTCACTGAAAAAGATCTTTTGAAA 374 * * ** *** ***** * ** ** * * * * * *** *** consensus_2411#0 GAGTTAATATATTT-CACATTATCAAC-ACAAGAAATAAATCAGTATA-ATTCTATAATT 469 consensus_2411#1 ACAATAATCCATTCATGCTTTACGAGCGATGAGAAATGAACAAGGACCTATTCTTTCTTG 434 **** *** * *** * * * ****** ** ** * ***** * * consensus_2411#0 AAAATGTATCAAGAATGGATACAAAAGGCTGCACCTTCTAAAAAATTGGTACATGAAAAG 529 consensus_2411#1 CATGGATATT-----TTTGTTCATGAACCTTTAAATTGGACGGAAAACGTTAATGAAGCA 489 * *** * * ** * ** * ** * ** ** ***** consensus_2411#0 TATAAAGAAGCAGTGGTAAAATATAATGCTTCAGAAGTATATACCAAAATGAACGAATTT 589 consensus_2411#1 TTAAAAGAAAGTGAAG-AAAATGTTACAAATATTGAATGGATACCA-------------- 534 * ****** * * ***** * * * * * ****** consensus_2411#0 ATTAATAAAACTAAATGGGATAGTTTACGCAAGACACTAATAGTATTATGTCCATCTAT 648 consensus_2411#1 ----------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |