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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2444#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[TTCATGATAGATAAGATCGTTCAGGGATGACGAAAGTTTACGATCCGCATTTCCACGTGATTTCGTCTGAACAAACGCCTTCGTAGTTCATATACGGTCTTCCCATCGATGCTTGAACGTTTCCTTGTTGAAAGATTAATTTGTAATAAGGAAGCGGTAGATGAAAAAAAAAAAACACGATGAGATTTCTAATTGTGAATCTTTTTAAAGAAAAATGGTTTGTTTCATTCGTGGTAGGTTTTACGCTTCGAACTATTGCGTGTTAATATGTGTAATGATTGAGAGAGAGAGAGAAAGAGAGAGAAAGTAACAATGAGAGAAAGAGAGAGAAAATGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGAAAGAGTGTGTTGAAAATAAAAAGAAAAAAAATAACGCTTACCTACCTACGATAATTTATTATCGACCGTTTTATTTGTATCGACGATATATGACGAAAAGTATCGATCGTAGACGAATTTAGCGTAGATAGGTTTCGTACTTCGTATTTATTGAACATTACTAAATCCATTATATATCAAATATCTCATGTATTGGAGCCGAAGAGGACAATTGAAAATAAATAATTGTAACCAAAAAAAA]
[+] EMBL BI508363 [TTCATGATAGATAAGATCGTTCAGGGATGACGAAAGTTTACGATCCGCATTTCCACGTGATTTCGTCTGAACAAACGCCTTCGTAGTTCATATACGGTCTTCCCATCGATGCTTGAACGTTTCCTTGTTGAAAGATTAATTTGTAATAAGGAAGCGGTAGATGAAAAAAAAAAAACACGATGAGATTTCTAATTGTGAATCTTTTTAAAGAAAAATGGTTTGTTTCATTCGTGGTAGGTTTTACGCTTCGAACTATTGCGTGTTAATATGTGTAATGATTGAGAGAGAGAGAGAAAGAGAGAGAAAGTAACAATGAGAGAAAGAGAGAGAAAATGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGAAAGAGTGTGTTGAAAATAAAAAGAAAAAAAATAACGCTTACCTACCTACGATAATTTATTATCGACCGTTTTATTTGTATCGACGATATATGACGAAAAGTATCGATCGTAGACGAATTTAGCGTAGATAGGTTTCGTACTTCGTATTTATTGAACATTACTAAATCCATTATATATCAAATATCTCATGTATTGGAGCCGAAGAGGACAATTGAAAATAAATAATTGTAACCAAAAAAAA]
consensusID : consensus_2444#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 554 fasta sequence
[CGCATTTCCACGTGATTTCGTCTGAACAAACGCCTTCGTAGTTCATATACGGTCTTCCCATCGATGCTTGAACGTTTCCTTGTTGAAAGATTAATTTGTAATAAGGAAGCGATAGATAAAAAAAAAAAACACGATGAGATTTCTAATTGTGAATCTTTTTAAAGAAAAATGGTTTGTTTCATTCGTGGTAGGTTTTACGCTTCGAACTATTGCGTGTTAATATGTGTAATGATTGAGAAAGAGAGAGAAAGTAACAATGAGAGAAAGAGAGAGAAAATGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGAAAGAGTGTATTGAAAATAAAAAGAAAAAAAATAACGCTTACCTACCTACGATAATTTATTATCGACCGTTTTATTTGTATCGACGATATATGACGAAAAGTATCGATCGTAGACGAATTTAGCGTAGATAGGTTTCGTACTTCGTATTTATTGAACATTACTAAATCCATTATATATCAAATATCTCATGTATTGGAGCCGAAGAGGACAATTGAAAATAAATAATTGTAACCAAAAAAAAAAA]
[+] EMBL BI503290 [CGCATTTCCACGTGATTTCGTCTGAACAAACGCCTTCGTAGTTCATATACGGTCTTCCCATCGATGCTTGAACGTTTCCTTGTTGAAAGATTAATTTGTAATAAGGAAGCGATAGATAAAAAAAAAAAACACGATGAGATTTCTAATTGTGAATCTTTTTAAAGAAAAATGGTTTGTTTCATTCGTGGTAGGTTTTACGCTTCGAACTATTGCGTGTTAATATGTGTAATGATTGAGAAAGAGAGAGAAAGTAACAATGAGAGAAAGAGAGAGAAAATGAGAATGAGAGGGAGAGAGAGAGAGAGAGAGAAAGAGTGTATTGAAAATAAAAAGAAAAAAAATAACGCTTACCTACCTACGATAATTTATTATCGACCGTTTTATTTGTATCGACGATATATGACGAAAAGTATCGATCGTAGACGAATTTAGCGTAGATAGGTTTCGTACTTCGTATTTATTGAACATTACTAAATCCATTATATATCAAATATCTCATGTATTGGAGCCGAAGAGGACAATTGAAAATAAATAATTGTAACCAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2444#0 TTCATGATAGATAAGATCGTTCAGGGATGACGAAAGTTTACGATCCGCATTTCCACGTGA 60
consensus_2444#1 ---------------------------------------------CGCATTTCCACGTGA 15
***************
consensus_2444#0 TTTCGTCTGAACAAACGCCTTCGTAGTTCATATACGGTCTTCCCATCGATGCTTGAACGT 120
consensus_2444#1 TTTCGTCTGAACAAACGCCTTCGTAGTTCATATACGGTCTTCCCATCGATGCTTGAACGT 75
************************************************************
consensus_2444#0 TTCCTTGTTGAAAGATTAATTTGTAATAAGGAAGCGGTAGATGAAAAAAAAAAAACACGA 180
consensus_2444#1 TTCCTTGTTGAAAGATTAATTTGTAATAAGGAAGCGATAGAT-AAAAAAAAAAAACACGA 134
************************************ ***** *****************
consensus_2444#0 TGAGATTTCTAATTGTGAATCTTTTTAAAGAAAAATGGTTTGTTTCATTCGTGGTAGGTT 240
consensus_2444#1 TGAGATTTCTAATTGTGAATCTTTTTAAAGAAAAATGGTTTGTTTCATTCGTGGTAGGTT 194
************************************************************
consensus_2444#0 TTACGCTTCGAACTATTGCGTGTTAATATGTGTAATGATTGAGAGAGAGAGAGAAAGAGA 300
consensus_2444#1 TTACGCTTCGAACTATTGCGTGTTAATATGTGTAATGATTGAGA----------AAGAGA 244
******************************************** ******
consensus_2444#0 GAGAAAGTAACAATGAGAGAAAGAGAGAGAAAATGAGAATGAGAGGGAGAGAGAGAGAGA 360
consensus_2444#1 GAGAAAGTAACAATGAGAGAAAGAGAGAGAAAATGAGAATGAGAGGGAGAGAGAGAGAGA 304
************************************************************
consensus_2444#0 GAGAGAAAGAGTGTGTTGAAAATAAAAAGAAAAAAAATAACGCTTACCTACCTACGATAA 420
consensus_2444#1 GAGAGAAAGAGTGTATTGAAAATAAAAAGAAAAAAAATAACGCTTACCTACCTACGATAA 364
************** *********************************************
consensus_2444#0 TTTATTATCGACCGTTTTATTTGTATCGACGATATATGACGAAAAGTATCGATCGTAGAC 480
consensus_2444#1 TTTATTATCGACCGTTTTATTTGTATCGACGATATATGACGAAAAGTATCGATCGTAGAC 424
************************************************************
consensus_2444#0 GAATTTAGCGTAGATAGGTTTCGTACTTCGTATTTATTGAACATTACTAAATCCATTATA 540
consensus_2444#1 GAATTTAGCGTAGATAGGTTTCGTACTTCGTATTTATTGAACATTACTAAATCCATTATA 484
************************************************************
consensus_2444#0 TATCAAATATCTCATGTATTGGAGCCGAAGAGGACAATTGAAAATAAATAATTGTAACCA 600
consensus_2444#1 TATCAAATATCTCATGTATTGGAGCCGAAGAGGACAATTGAAAATAAATAATTGTAACCA 544
************************************************************
consensus_2444#0 AAAAAAA--- 607
consensus_2444#1 AAAAAAAAAA 554
*******
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |