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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2487#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[AGTTCCCTCGCTTCCCCCGCGCAAAGGTAATCTCTCAGAGATCGAATGGTGACTCAGATAATCTCAACTCACCTGCGCAAAGAGAACAAAGCAACACGTTTCACGGTCACTACCGAACGATCATCATGTTCGACATCTTCGAAGCACTTTGTCACGCGCGCGCGTGCGTGCGTATACGTTAATAAAATTATTGTCTTTTTCTTTTTTTCTTTCTCATCTCTTTCTCTCTCTCTCTCTTTCGCTCTCTTCTTTTTTTTTTTCATTGATCTCTCAATCTCTTTCACTCTATCAATCTTTCTCTGTACAGTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCGCTCACTCGCTAGCTCGCTCGCTCACGCACACTCACGCTCCACCCTCTCGCTCGCAGTCTCGCACCATTTAACTCGTCCTTTTTTTCTCTCTCCATCTCGTTCAGCTGGACTCGCTCTCGTGTCTATTCGGCTATCATCCAAAGGTATGCTAACGTACGTATATATACACACATACATATATATATATATACACGCGCGCATACAGACACACTCAAGCAAGAGAGGAACGGTTAGACGAATAATTAATAA]
[+] EMBL BI503205 [AGTTCCCTCGCTTCCCCCGCGCAAAGGTAATCTCTCAGAGATCGAATGGTGACTCAGATAATCTCAACTCACCTGCGCAAAGAGAACAAAGCAACACGTTTCACGGTCACTACCGAACGATCATCATGTTCGACATCTTCGAAGCACTTTGTCACGCGCGCGCGTGCGTGCGTATACGTTAATAAAATTATTGTCTTTTTCTTTTTTTCTTTCTCATCTCTTTCTCTCTCTCTCTCTTTCGCTCTCTTCTTTTTTTTTTTCATTGATCTCTCAATCTCTTTCACTCTATCAATCTTTCTCTGTACAGTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCGCTCACTCGCTAGCTCGCTCGCTCACGCACACTCACGCTCCACCCTCTCGCTCGCAGTCTCGCACCATTTAACTCGTCCTTTTTTTCTCTCTCCATCTCGTTCAGCTGGACTCGCTCTCGTGTCTATTCGGCTATCATCCAAAGGTATGCTAACGTACGTATATATACACACATACATATATATATATATACACGCGCGCATACAGACACACTCAAGCAAGAGAGGAACGGTTAGACGAATAATTAATAA]
consensusID : consensus_2487#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[TCCCTCGCTTCCCCCGCGCAAAGGTAATCTCTCAGAGATCGAATGGTGACTCAGATAATCTCAACTCACCTGCGCAAAGAGAACAAAGCAACACGTTTCACGGTCACTACCGAACGATCATCATGTTCGACATCTTCGAAGCACTTTGTCACGCGCGCGCGTGCGTGCGTATACGTTAATAAAATTATTGTCTTTTTCTTTTTTTCTTTCTCATCTCTTTCTCTCTCTCTCTCTTTCGCTCTCTTCTTTTTTTTTTCATTGATCTCTCAATCTCTTTCACTCTATCAATCTTTCTCTGTACAGTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCACGCACACTCACGCTCCACCCTCTCGCTCGCAGTCTCGCACCATTTAACTCGTCCTTTTTTTCTCTCTCCATCTCGTTCAGCTGGACTCGCTCTCGTGTCTATTCGGCTATCATCCAAAGNTATGCTAACGTACGTATATATACACACATACATATATATATATATACACGCGCGCATACAGACA]
[+] EMBL BI509328 [TCCCTCGCTTCCCCCGCGCAAAGGTAATCTCTCAGAGATCGAATGGTGACTCAGATAATCTCAACTCACCTGCGCAAAGAGAACAAAGCAACACGTTTCACGGTCACTACCGAACGATCATCATGTTCGACATCTTCGAAGCACTTTGTCACGCGCGCGCGTGCGTGCGTATACGTTAATAAAATTATTGTCTTTTTCTTTTTTTCTTTCTCATCTCTTTCTCTCTCTCTCTCTTTCGCTCTCTTCTTTTTTTTTTCATTGATCTCTCAATCTCTTTCACTCTATCAATCTTTCTCTGTACAGTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCACGCACACTCACGCTCCACCCTCTCGCTCGCAGTCTCGCACCATTTAACTCGTCCTTTTTTTCTCTCTCCATCTCGTTCAGCTGGACTCGCTCTCGTGTCTATTCGGCTATCATCCAAAGNTATGCTAACGTACGTATATATACACACATACATATATATATATATACACGCGCGCATACAGACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2487#0 AGTTCCCTCGCTTCCCCCGCGCAAAGGTAATCTCTCAGAGATCGAATGGTGACTCAGATA 60
consensus_2487#1 ---TCCCTCGCTTCCCCCGCGCAAAGGTAATCTCTCAGAGATCGAATGGTGACTCAGATA 57
*********************************************************
consensus_2487#0 ATCTCAACTCACCTGCGCAAAGAGAACAAAGCAACACGTTTCACGGTCACTACCGAACGA 120
consensus_2487#1 ATCTCAACTCACCTGCGCAAAGAGAACAAAGCAACACGTTTCACGGTCACTACCGAACGA 117
************************************************************
consensus_2487#0 TCATCATGTTCGACATCTTCGAAGCACTTTGTCACGCGCGCGCGTGCGTGCGTATACGTT 180
consensus_2487#1 TCATCATGTTCGACATCTTCGAAGCACTTTGTCACGCGCGCGCGTGCGTGCGTATACGTT 177
************************************************************
consensus_2487#0 AATAAAATTATTGTCTTTTTCTTTTTTTCTTTCTCATCTCTTTCTCTCTCTCTCTCTTTC 240
consensus_2487#1 AATAAAATTATTGTCTTTTTCTTTTTTTCTTTCTCATCTCTTTCTCTCTCTCTCTCTTTC 237
************************************************************
consensus_2487#0 GCTCTCTTCTTTTTTTTTTTCATTGATCTCTCAATCTCTTTCACTCTATCAATCTTTCTC 300
consensus_2487#1 GCTCTCTTCTTTTTTTTTT-CATTGATCTCTCAATCTCTTTCACTCTATCAATCTTTCTC 296
******************* ****************************************
consensus_2487#0 TGTACAGTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTCGCTCACTCGCTAGCTCGCT 360
consensus_2487#1 TGTACAGTCTCTCTCTCTCTCTCTCTTTTTCTCTTTCTCTC------------------- 337
*****************************************
consensus_2487#0 CGCTCACGCACACTCACGCTCCACCCTCTCGCTCGCAGTCTCGCACCATTTAACTCGTCC 420
consensus_2487#1 -----ACGCACACTCACGCTCCACCCTCTCGCTCGCAGTCTCGCACCATTTAACTCGTCC 392
*******************************************************
consensus_2487#0 TTTTTTTCTCTCTCCATCTCGTTCAGCTGGACTCGCTCTCGTGTCTATTCGGCTATCATC 480
consensus_2487#1 TTTTTTTCTCTCTCCATCTCGTTCAGCTGGACTCGCTCTCGTGTCTATTCGGCTATCATC 452
************************************************************
consensus_2487#0 CAAAGGTATGCTAACGTACGTATATATACACACATACATATATATATATATACACGCGCG 540
consensus_2487#1 CAAAGNTATGCTAACGTACGTATATATACACACATACATATATATATATATACACGCGCG 512
***** ******************************************************
consensus_2487#0 CATACAGACACACTCAAGCAAGAGAGGAACGGTTAGACGAATAATTAATAA 591
consensus_2487#1 CATACAGACA----------------------------------------- 522
**********
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |