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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 546 fasta sequence
[AAATCGACGATGAAAAAGCGCGGGAAATTATATTAAAGACGGAAGAACGCGCAAAAAGGGTGTTGGAAGAGCGAGAAGGAGTGGTGGTTTCAGAAATGGCCATCGAAGACACGGCCCGTGATTTCACGATAGAATCGGTGGTCGATCGTGCACAGATCACGTCGGAGACATTGCAAACTGTCTCCGTGTCGGAAGTGCACACGGAGGCCAGCGTTCAAGAGATCAGACGAGTGGACACAAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAAAGTTAGAGAAAAAAGATAAAGAAACATCAGGAAAAAAAGACAAGGAAACATCAGGGAAAAAAGACAAGGAAATATCAGAAAAAAAAGATAAGGAAACATTAGAAAAAAAAAAAAAAAAANNNCCAAAAGAAAAAGGTATCCCTTAAATTCACCATAGACTGTACACATCCTGCAGANGATAATATTATGGATGTAGCTAATTTCGAAAAATATTTACATGAAAGAATTAAAGTTGCTGGCAAA]
[+] EMBL BI510984 [AAATCGACGATGAAAAAGCGCGGGAAATTATATTAAAGACGGAAGAACGCGCAAAAAGGGTGTTGGAAGAGCGAGAAGGAGTGGTGGTTTCAGAAATGGCCATCGAAGACACGGCCCGTGATTTCACGATAGAATCGGTGGTCGATCGTGCACAGATCACGTCGGAGACATTGCAAACTGTCTCCGTGTCGGAAGTGCACACGGAGGCCAGCGTTCAAGAGATCAGACGAGTGGACACAAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAAAGTTAGAGAAAAAAGATAAAGAAACATCAGGAAAAAAAGACAAGGAAACATCAGGGAAAAAAGACAAGGAAATATCAGAAAAAAAAGATAAGGAAACATTAGAAAAAAAAAAAAAAAAANNNCCAAAAGAAAAAGGTATCCCTTAAATTCACCATAGACTGTACACATCCTGCAGANGATAATATTATGGATGTAGCTAATTTCGAAAAATATTTACATGAAAGAATTAAAGTTGCTGGCAAA]
[+] EMBL BI511115 [ GGGAAATTATATTAAAGACGGAAGAACGCGCAAAAAGGGTGTTGGAAGAGCGAGAAGGAGTGGTGGTTTCAGAAATGGCCATCGAAGACACGGCCCGTGATTTCACGATAGAATCGGTGGTCGATCGTGCACAGATCACGTCGGAGACATTGCAAACTGTCTCCGTGTCGGAAGTGCACACGGAGGCCAGCGTTCAAGAGATCAGACGAGTGGACACAAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAAAGTTAGAGAAAAAAGATAAAGAAACATCAGGAAAAAAAGACAAGGAAACATCAGGGAAAAAAGACAAGGAAATATCAGAAAAAAAAGATAAGGAAACATTAGAA ]
[+] EMBL BI510661 [ TATATTAAAGACGGAAGAACGCGCAAAAAGGGTGTTGGAAGAGCGAGAAGGAGTGGTGGTTTCAGAAATGGCCATCGAAGACACGGCCCGTGATTTCACGATAGAATCGGTGGTCGATCGTGCACAGATCACGTCGGAGACATTGCAAACTGTCTCCGTGTCGGAAGTGCACACGGAGGCCAGCGTTCAAGAGATCAGACGAGTGGACACAAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAAAGTTAGAGAAAAAAGATAAAGAAACATCAGGAAAA ]
consensusID : consensus_250#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 502 fasta sequence
[GTAAACATGGCTCCGCCTACTACAAAGAAGTCCAAGGGACCAGCCATTAAAAAACAGGCCCTTCGGGGTAAAGGCCAAAAGAAAAAGGTATCCCTTAAATTCACCATAGACTGTACACATCCTGCAGAAGATAATATTATGGATGTAGCTAATTTCGAAAAATATTTACATGAAAGAATTAAAGGTTGCTGGCAAAACAAATAATTTTGGTAACAGGTGTTACATTGGAAAGGGATAAGATGAAACTATCTGTTAACAGTGATATCGATTTTTCTAAACGGTATCTCAAATATCTTACAAAAAAATATTTGAAAAAAAATAAATTACGTGATTGGTTACGTGTTGTATCAAAAGACAAAGNAACCTATGAGTTAAGGTACTTCCAGATTAACAGTCAAGAAGATGATGATGAAGAAGATGCAGAATAAAATTTTAATTGTATGATGCAATTACAGAATTATCTGTACATATTTCTACTAATAAATAATAGGAAAAAAAAAAA]
[+] EMBL BG101654 [GTAAACATGGCTCCGCCTACTACAAAGAAGTCCAAGGGACCAGCCATTAAAAAACAGGCCCTTCGGGGTAAAGGCCAAAAGAAAAAGGTATCCCTTAAATTCACTATAGACTGTACACATCCTGCAGAAGATAATATTATGGATGTAGCTAATTTCGAAAAATATTTACATGAAAGAATTAAAGGTTGCTGGCAAAACAAATAATTTTGGTAACAGGTGTTACATTGGAAAGGGATAAGATGAAACTATCTGTTAACAGTGATATCGATTTTTCTAAACGGTATCTCAAATATCTTACAAAAAAATATTTG AAAAAAATAAATTACGTGATTGGTTACGTGTTGT TCAAAAGACAAAGN ]
[+] EMBL BI505438 [ TACAAAGAAGTCCAAGGGACCAGCCATTAAAAAACAGGCCCTTCGGGGTAAAGGCCAAAAGAAAAAGGTATCCCTTAAATTCACCATAGACTGTACACATCCTGCAGAAGATAATATTATGGATGTAGCTAATTTCGAAAAATATTTACATGAAAGAATTAAA GTTGCTGGCAAAACAAATAATTTTGGTAACA GTGTTACATTGGAAAGGGATAAGATGAAACTATCTGTTAACAGTGATATCGATTTTTCTAAACGGTATCTCAAATATCTTACAAAAAAATATTTGAAAAAAAATAAATTACGTGATTGGTTACGTGTTGTATCAAAAGACAAAGAAACCTATGAGTTAAGGTACTTCCAGATTAACAGTCAAGAAGATGATGATGAAGAAGATGCAGAATAAAATTTTAATTGTATGATGCAATTACAGAATTATCTGTACATATTTCTACTAATAAATAATAGGAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_250#0 AAATCGACGATGAAAAAGCGCGGGAAATTATATTAAAGACGGAAGAACGCGCAAAAAGGG 60
consensus_250#1 --------GTAAACATGGCTCCGCCTACTACAAAGAAGTCCAAGGGACCAGCCATTAAAA 52
* * * ** * * * ** * *** * * * ** ** * *
consensus_250#0 TGTTGGAAGAGCGAGAAGGAGTGGTGGTTTCAGAAATGGCCATCGAAGACACGGCCCGTG 120
consensus_250#1 AACAGGCCCTTCGGGGTAAAGGCCAAAAGAAAAAGGTATCCCTTAAATTCA---CCATAG 109
** ** * ** * * * ** * ** ** ** *
consensus_250#0 ATTTCACGATAGAATCGGTGGTCGATCGTGCACAGATCACGTCGGAGACATTGCAAACTG 180
consensus_250#1 ACTGTAC---ACATCCTGCAGAAGATAATATTATGG--ATGTAGCTAATTTCGAAAAATA 164
* * ** * * * * * *** * * * ** * * * * *** *
consensus_250#0 TCTCCGTGTCGGAAGTGCACACGGAGGCCAGCGTTCAAGAGATCAG--ACGAGTGG-ACA 237
consensus_250#1 TTTACATGAAAGAATTAAAGGTTGCTGGCAAAACAAATAATTTTGGTAACAGGTGTTACA 224
* * * ** *** * * * * ** * * * * ** *** ***
consensus_250#0 CAAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAAAAGAAATATTAGACAAAAAAGAAA 297
consensus_250#1 TTGGAAAGGGATAAGATGAAACTATCTGTTAACAGTGATATCGATTTTTCTAAACGGTAT 284
*** * * **** * * ** * * * *** * *** * *
consensus_250#0 AAGAAAAGTTAGAGAAAAAAGATAAAGAAACATCAGGAAAAAAAGACAAGGAAACATCAG 357
consensus_250#1 CTCAAATATCTTACAAAAAAATATTTGAAAAAAAATAAATTACGTGATTGGTTACGTGTT 344
*** * * ****** **** * * ** * ** ** *
consensus_250#0 GGAA-AAAAGACAAGGAAATATCAGAAAAAAAAGATAAGGAAACATTAGAAAAAAAAAAA 416
consensus_250#1 GTATCAAAAGACAAAGNAACCT-------ATGAGTTAAGGTACTTCCAGATTAACAGTCA 397
* * ********* * ** * * ** ***** * *** ** * *
consensus_250#0 AAAAAANNNCCAAAAGAAAAAGGTATCCCTTAAATTCACCATAGACTGTACACATCCTGC 476
consensus_250#1 AGAAGATGATGATGAAGAAGATGCA------GAATAAAATTTTAATTGTATG----ATGC 447
* ** * * * ** * * * *** * * * **** ***
consensus_250#0 AGANGATAATATTATGGATGTAGCTAATTTCGAAAAATATTTACATGAAAGAATTAAAGT 536
consensus_250#1 A-ATTACAGAATTATC--TGTACATATTTCTACTAATAAATAATAGGAAAAAAAAAAA-- 502
* * * * ***** **** ** ** ** * * * * **** ** ***
consensus_250#0 TGCTGGCAAA 546
consensus_250#1 ----------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |