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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2545#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence
[GTGGAAATCGCGTGTGTTTCTGTTCAACAAACGTCGGGAAGCTTCGTAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGTGCGTATCATTTTTTCTGAAACGGGACACCTTATACCACAATATCTATTGCTACCCTCATCCTACAACGTGAAATCTTATTCCTAACAGGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGA]
[+] EMBL BI514946 [GTGGAAATCGCGTGTGTTTCTGTTCAACAAACGTCGGGAAGCTTCGTAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGTGCGTATCATTTTTTCTGAAACGGGACACCTTATACCACAATATCTATTGCTACCCTCATCCTACAACGTGAAATCTTATTCCTAACAGGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGA]
consensusID : consensus_2545#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence
[TAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGATCGATTCTCCATCACGGAGGAGAAGGATGAAGAACGACGAGGGAGGGGTTCCACGGAGAAAAATCGAGGAAGAATCGGATAAAGGGACAACTCT]
[+] EMBL BI512447 [TAGCTATACACGCAATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAACCTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATGACAATCATCCCGGATTACGAACGGAAAGCGCGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAAACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGACAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAACAGATCGATTCTCCATCACGGAGGAGAAGGATGAAGAACGACGAGGGAGGGGTTCCACGGAGAAAAATCGAGGAAGAATCGGATAAAGGGACAACTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2545#0 GTGGAAATCGCGTGTGTTTCTGTTCAACAAACGTCGGGAAGCTTCGTAGCTATACACGCA 60
consensus_2545#1 ----------------------------------------------TAGCTATACACGCA 14
**************
consensus_2545#0 ATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAAC 120
consensus_2545#1 ATACACGCAATACGTACGCAATAGTGTAACGCGTAAAAAAAGATGGACGGTGCACGCAAC 74
************************************************************
consensus_2545#0 CTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATG 180
consensus_2545#1 CTGTTTCTATCTTCGCGTCGTTTGTGCGGTTTTAAAGTGTTTTGCGTTCGAACTTGCATG 134
************************************************************
consensus_2545#0 TGCGTATCATTTTTTCTGAAACGGGACACCTTATACCACAATATCTATTGCTACCCTCAT 240
consensus_2545#1 ------------------------------------------------------------
consensus_2545#0 CCTACAACGTGAAATCTTATTCCTAACAGGACAATCATCCCGGATTACGAACGGAAAGCG 300
consensus_2545#1 ------------------------------ACAATCATCCCGGATTACGAACGGAAAGCG 164
******************************
consensus_2545#0 CGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAA 360
consensus_2545#1 CGACGAATCCCTCTTTCAAGCTGCACCGTATGGTACAACCTGAGCGACATTTAACCGGAA 224
************************************************************
consensus_2545#0 ACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGA 420
consensus_2545#1 ACTTGATATCGGTGGACATTCACCGCCGTGAGCTCTTTCAATTGATCGTGGCCTACACGA 284
************************************************************
consensus_2545#0 CAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAA 480
consensus_2545#1 CAATGAGGATCAACTACGTCGAACAACATGGAGCGAGACGGCGATGCTGCTTCGGACGAA 344
************************************************************
consensus_2545#0 CAGA-------------------------------------------------------- 484
consensus_2545#1 CAGATCGATTCTCCATCACGGAGGAGAAGGATGAAGAACGACGAGGGAGGGGTTCCACGG 404
****
consensus_2545#0 --------------------------------------
consensus_2545#1 AGAAAAATCGAGGAAGAATCGGATAAAGGGACAACTCT 442
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |