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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_257#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 616 fasta sequence
[AAACTAAAATTCCCATAAGTACTTTTAAGTGTGATTCGTATATTATAACGCATATATATATATGCATGCATACCGGTTATATTTAACTATTCGTTAAACGATATGTGTATTATTGCGTAAACTATAAGACGTTCGAAGACGTTCATCGTACGTATGTTATGTATATGCGTTTGGAACCGCTCGGATAAGTAATTGACACAGTCGATACAGCAGACAGAGTGGTGGTTTACGTGACAGCTTAGACCAGGTTAAGGTTATGTCGAAAATTCGATCGAGCGAACCAATGTGTGTGATACTCGAAATATATTCATATACGTGGTCGGGAAATGACGTGAAATTCCTACGGTCGAGACACCGTGCCGTTGATTCTTAATATTGGATTTATCTTCACGGTCCTCGTTTAAAATATCTTCCGATTTTAATACTCGCTTCAGAAAAATTGACATTTTTCCGTTTATAAGGTTAACCTGCTTAAGTGCACACGTATGGAAATTCAAGCGAAATTCTCGCCGATTCTTGTTGATATTTTAAATTGCGAAGCCAGGAAAGATCTGTTTCG--GCTTTCAATTCGAGTTCAATCCGGGGAAAAAGGAAATTATAGCGAATATATCGATAT]
[-] EMBL BE844530 [AAACTAAAATTCCCATAAGTACTTTTAAGTGTGATTCGTATATTATAACGCATATATATATATGCATGCATACCGGTTATATTTAACTATTCGTTAAACGATATGTGTATTATTGCGTAAACTATAAGACGTTCGAAGACGTTCATCGTACGTATGTTATGTATATGCGTTTGGAACCGCTCGGATAAGTAATTGACACAGTCGATACAGCAGACAGAGTGGTGGTTTACGTGACAGCTTAGACCAGGTTAAGGTTATGTCGAAAATTCGATCGAGCGAACCAATGTGTGTGATACTCGAAATATATTCATATACGTGGTCGGGAAATAATGTGAAATTCTTACGGTCGAAACATCGTGCCGTTGATTCTTAATATTGGATTTATCTTCACGGTCCTCGTTTAAAATATCTTCCGATTTTAATACTCGCTTCAGAAAAATTGACATTTTTCCGTTTATAAGGTTAACCTGCTTAAGTGCACACGTATGGAAATTCAAGCGAAATTCTCGCCGATTCTTGTTGATATTTTAAATTGCGAAGCCAGAAAAAATCTGTTTCGAATTTTTCAATTCGAATTCA ]
[+] EMBL BI507481 [ AAACGATATGTGTATTATTGCGTAAACTATAAGACGTTCGAAGACGTTCATCGTACGTATGTTATGTATATGCGTTTGGAACCGCTCGGATAAGTAATTGACACAGTCGATACAGCAGACAGAGTGGTGGTTTACGTGACAGCTTAGACCAGGTTAAGGTTATGTCGAAAATTCGATCGAGCGAACCAATGTGTGTGATACTCGAAATATATTCATATACGTGGTCGGGAAATGACGTGAAATTCCTACGGTCGAGACACCGTGCCGTTGATTCTTAATATTGGATTTATCTTCACGGTCCTCGTTTAAAATATCTTCCGATTTTAATACTCGCTTCAGAAAAATTGACATTTTTCCGTTTATAAGGTTAACCTGCTTAAGTGCACACGTATGGAAATTCAAGCGAAATTCTCGCCGATTCTTGTTGATATTTTAAATTGCGAAGCCAGGAAAGATCTGTTTCG GCTTTCAATTCGAGTTCAATCCGGGGAAAAAGGAAATTATAGCGAATATATCGATAT]
[+] EMBL BI504145 [ GCGAACCAATGTGTGTGATACTCGAAATATATTCATATACGTGGTCGGGAAATGACGTGAAATTCCTACGGTCGAGACACCGTGCCGTTGATTCTTAATATTGGATTTATCTTCACGGTCCTCGTTTAAAATATCTTCCGATTTTAATACTCGCTTCAGAAAAATTGACATTTTTCCGTTTATAAGGTTAACCTGCTTAAGTGCACACGTATGGAAATTCAAGCGAAATTCTCGCCGATTCTTGTTGATATTTTAAATTGCGAAGCCAGGAAAGATCTGTTTCG GCTTTCA ]
consensusID : consensus_257#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 453 fasta sequence
[AATAGGTGTCGCGGAACGAGAAAATTTACAATGATTTTTGCGCTATGCTAAATTCGAGTCTTCGCAGTCTACGGTAAAATCTTAGTGATCGGATACAGGAAGAAATCCTGTAACCATAACATAAGCGTTTATGGTATTTTATATTCTTTGGAATGCTTATAGTAGCGTATTCCACGAGCATTCGTTCGTTATTTATTATCTTCTGCTTTTATTTCACTAGTATTATTTCTCGCAACTATTTCCTTCTTTTTCACTGTGGCAATATCATCTTTGGTTCAAACTCTTCTCTATACATAAAAAGTCGCAAAGATATGAAAGATAAGATGCAAGTGATGGGTATTCATATGTAGATACACGACTGCTACAGATATATCGATATATTTGCTATAATTTCCTTTTTCCCCGGATTGAATTCGAATTGAAAAATTCGAAACAGATTTTTTCTGGCTTCGC]
[+] EMBL BI514389 [AATAGGTGTCGCGGAACGAGAAAATTTACAATGATTTTTGCGCTATGCTAAATTCGAGTCTTCGCAGTCTACGGTAAAATCTTAGTGATCGGATACAGGAAGAAATCCTGTAACCATAACATAAGCGTTTATGGTATTTTATATTCTTTGGAATGCTTATAGTAGCGTATTCCACGAGCATTCGTTCGTTATTTATTATCTTCTGCTTTTATTTCACTAGTATTATTTCTCGCAACTATTTCCTTCTTTTTCACTGTGGCAATATCATCTTTGGTTCAAACTCTTCTCTATACATAAAAAGTCGCAAAGATATGAAAGATAAGATGCAAGTGATGGGTATTCATATGTAGATACACGACTGCTACAGATATATCGATATATTTGCTATAATTTCCTTTTTCCCCGGATTGAATTCGAATTGAAAAATTCGAAACAGATTTTTTCTGGCTTCGC]
[+] EMBL BI514376 [AATAGGTGTCGCGGAACGAGAAAATTTACAATGATTTTTGCGCTATGCTAAATTCGAGTCTTCGCAGTCTACGGTAAAATCTTAGTGATCGGATACAGGAAGAAATCCTGTAACCATAACATAAGCGTTTATGGTATTTTATATTCTTTGGAATGCTTATAGTAGCGTATTCCACGAGCATTCGTTCGTTATTTATTATCTTCTGCTTTTATTTCACTAGTATTATTTCTCGCAACTATTTCCTTCTTTTTCACTGTGGCAATATCATCTTTGGTTCAAACTCTTCTCTATACATAAAAAGTCGCAAAGATATGAAAGATAAGATGCAAGTGATGGGTATTCATATGTAGATACACGACTGCTACAGATATATCGATATATTTGCTATAATTTCCTTTTTCCCCGGATTGAATTCGAATTGAAAAATTCGAAACAGATTTTTTCTGGCTTC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_257#0 AAACTAAAATTCCCATAAGTACTTTTAAGTGTGATTCGTATATTATAACGCATATATATA 60
consensus_257#1 ------------------------------------------------------------
consensus_257#0 TATGCATGCATACCGGTTATATTTAACTATTCGTTAAACGATATGTGTATTATTGCGTAA 120
consensus_257#1 ---------------------------------------AATAGGTGT-----CGCG-GA 15
*** **** *** *
consensus_257#0 ACTATAAGACGTTCGAAGACGTTCATCGTACGTATGTTATGTATATGCGTTTGGAACCGC 180
consensus_257#1 ACGAGAAAATTTACAATGATTTTTG-CGC---TATGCTAAATTCGAGTCTTCGCAGT--C 69
** * ** * * * * ** ** ** **** ** * * ** * * *
consensus_257#0 TCGGATAAGTAATTGACACAGTCGATACAGCAGACAGAGTGGTGGT--TTACGTGACAGC 238
consensus_257#1 TACGGTAAAATCTTAGTG-ATCGGATACAGGAAGAAATCCTGTAACCATAACATAAGCGT 128
* * *** ** * ******* * * ** * ** * * *
consensus_257#0 TTAGACCAGGTTAAGGTTATGTCGAAAATTCGATCGAGCGAAC-CAATGTGTGTGATACT 297
consensus_257#1 TTATGGTATTTTATA-TTCTTTGGAATGCTTATAGTAGCGTATTCCACGAGCATT-CGTT 186
*** * *** ** * * *** * **** * * * * * * *
consensus_257#0 CGAAATATATTCATATACGTGGTCGGGAAATGACGTGAAATTCCTACGGTCGAGACACCG 357
consensus_257#1 CGTTATTTATTATCTTCTGCTTTTATTTCACTAGTATTATTTCTCGCAACTATTTCCTTC 246
** ** **** * * * * * * *** * *
consensus_257#0 TGCCGTTGATTCTTAATATTGGATTTATCTTCACGGTCCTCGTTTAAAATATCTTCCGAT 417
consensus_257#1 TTTTTCACTGTGGCAATATCATCTTTGG-TTCAAACTCTTCTCTATACATAAAAAGTCGC 305
* * ***** *** **** ** ** * * ***
consensus_257#0 TTTAATACTCGCTTCAGAAA--AATTGACATTTTTCCGTTTATAAGGTTAACCTGCTTAA 475
consensus_257#1 AAAGATATGAAAGATAAGATGCAAGTGATGGGTATTCATATGTA--GATACACGACT--G 361
*** * * ** *** * * * * * ** * ** * **
consensus_257#0 GTGCACACGTATGGAAATTCAAGCGAAATTCTCGCCGATTCTTGTTGATATTTTAAATTG 535
consensus_257#1 CTACAGATATATCGATATATTTGCTATAATTTCCTTTTTCCCCGGATTGAATTCGAATTG 421
* ** * *** ** ** ** * * * ** * * * * ** *****
consensus_257#0 CGAAGCCAGGAA-AGATCTGTTTCGGCTTTCAATTCGAGTTCAATCCGGGGAAAAAGGAA 594
consensus_257#1 AAAAATTCGAAACAGATTTTTTCTGGCTTCGC---------------------------- 453
** * ** **** * ** *****
consensus_257#0 ATTATAGCGAATATATCGATAT 616
consensus_257#1 ----------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |