These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2594#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 556 fasta sequence [CGACGAAATATTTACGAAGACAACTTACGCTTATATTCCCATAAAAAGCGATTTTTACTACATGGCAATATAATTCATTCAGATAGATATATCGAGGATATAAATTAATAAATATATCAGCTGTAATCAAAATCATAATCATGATTATTGAAAAATATCAATATAGAAAAATCTGTCAATCAACTTTTAATTGTATTATCACTAATTACGATTTAATTTTTTATTTTAAATATTTTAAATATTTAAAAGAATCTAATTATTTTTAACCATTTCAAATTCACGTCATATTTCCAATTCTTTATCTCTCCTGAATATTTGAATTTCTGTTTTAAACATTTGCAATTTTCTGTTAATTCTAATTAATTTTATAACCTCGTTATATCTTCTAAGTCGATCAATATCTTGATTTCAATCCAAACGAAAAATAATAATAATAATAATAATAATAATAATATTAATAATAATAATAATAATAATACGTGGAAGAATGGGTCGAGAATCACTAATAACGAACAGTTACGAATAATACTAATCATATTTATCATAGGCTATTATT] [+] EMBL BI515505 [CGACGAAATATTTACGAAGACAACTTACGCTTATATTCCCATAAAAAGCGATTTTTACTACATGGCAATATAATTCATTCAGATAGATATATCGAGGATATAAATTAATAAATATATCAGCTGTAATCAAAATCATAATCATGATTATTGAAAAATATCAATATAGAAAAATCTGTCAATCAACTTTTAATTGTATTATCACTAATTACGATTTAATTTTTTATTTTAAATATTTTAAATATTTAAAAGAATCTAATTATTTTTAACCATTTCAAATTCACGTCATATTTCCAATTCTTTATCTCTCCTGAATATTTGAATTTCTGTTTTAAACATTTGCAATTTTCTGTTAATTCTAATTAATTTTATAACCTCGTTATATCTTCTAAGTCGATCAATATCTTGATTTCAATCCAAACGAAAAATAATAATAATAATAATAATAATAATAATATTAATAATAATAATAATAATAATACGTGGAAGAATGGGTCGAGAATCACTAATAACGAACAGTTACGAATAATACTAATCATATTTATCATAGGCTATTATT] consensusID : consensus_2594#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 463 fasta sequence [CAATATAATTCATTCAGATAGATATATCGAGGATATAAATTAATAAATATATCAGCTGTAATCAAAATCATAATCATGATTATTGAAAAATATCAATATAGAAAAATCTGTCAATCAACTTTTAATTGTATTATCACTAATTACGATTTAATTTTTTATTTTAAATATTTTAAATATTTAAAAGAATCTAATTATTTTTAACCATTTCAAATTGACATCATATTTCCAACTCTTCATCTCTTTTGAATATTTGAAGTTCTGTTTTAGAAAGTATTTTAAACATTTGCAATTTTCTGTCCAATTAATTTTATAACCTCGTTATATCTTCTAAGTCGATCAATATCTTGATTTCAATCCAAACGAAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACGTGGAAGAATGGGTCGAAAATCACTAATAACGAACAGTTACGAATAATACT] [+] EMBL BI513679 [CAATATAATTCATTCAGATAGATATATCGAGGATATAAATTAATAAATATATCAGCTGTAATCAAAATCATAATCATGATTATTGAAAAATATCAATATAGAAAAATCTGTCAATCAACTTTTAATTGTATTATCACTAATTACGATTTAATTTTTTATTTTAAATATTTTAAATATTTAAAAGAATCTAATTATTTTTAACCATTTCAAATTGACATCATATTTCCAACTCTTCATCTCTTTTGAATATTTGAAGTTCTGTTTTAGAAAGTATTTTAAACATTTGCAATTTTCTGTCCAATTAATTTTATAACCTCGTTATATCTTCTAAGTCGATCAATATCTTGATTTCAATCCAAACGAAAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATACGTGGAAGAATGGGTCGAAAATCACTAATAACGAACAGTTACGAATAATACT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2594#0 CGACGAAATATTTACGAAGACAACTTACGCTTATATTCCCATAAAAAGCGATTTTTACTA 60 consensus_2594#1 ------------------------------------------------------------ consensus_2594#0 CATGGCAATATAATTCATTCAGATAGATATATCGAGGATATAAATTAATAAATATATCAG 120 consensus_2594#1 -----CAATATAATTCATTCAGATAGATATATCGAGGATATAAATTAATAAATATATCAG 55 ******************************************************* consensus_2594#0 CTGTAATCAAAATCATAATCATGATTATTGAAAAATATCAATATAGAAAAATCTGTCAAT 180 consensus_2594#1 CTGTAATCAAAATCATAATCATGATTATTGAAAAATATCAATATAGAAAAATCTGTCAAT 115 ************************************************************ consensus_2594#0 CAACTTTTAATTGTATTATCACTAATTACGATTTAATTTTTTATTTTAAATATTTTAAAT 240 consensus_2594#1 CAACTTTTAATTGTATTATCACTAATTACGATTTAATTTTTTATTTTAAATATTTTAAAT 175 ************************************************************ consensus_2594#0 ATTTAAAAGAATCTAATTATTTTTAACCATTTCAAATTCACGTCATATTTCCAATTCTTT 300 consensus_2594#1 ATTTAAAAGAATCTAATTATTTTTAACCATTTCAAATTGACATCATATTTCCAACTCTTC 235 ************************************** ** ************ **** consensus_2594#0 ATCTCTCCTGAATATTTGAATTTCTGTTTTA------------AACATTTGCAATTTTCT 348 consensus_2594#1 ATCTCTTTTGAATATTTGAAGTTCTGTTTTAGAAAGTATTTTAAACATTTGCAATTTTCT 295 ****** ************ ********** ***************** consensus_2594#0 GTTAATTCTAATTAATTTTATAACCTCGTTATATCTTCTAAGTCGATCAATATCTTGATT 408 consensus_2594#1 GT-----CCAATTAATTTTATAACCTCGTTATATCTTCTAAGTCGATCAATATCTTGATT 350 ** * *************************************************** consensus_2594#0 TCAATCCAAACGAAAAATAATAATAATAATAATAATAATAATAATATTAATAATAATAAT 468 consensus_2594#1 TCAATCCAAACGAAAAATAATAATAATAATAATAATAATAATAATA---------ATAAT 401 ********************************************** ***** consensus_2594#0 AATAATAATACGTGGAAGAATGGGTCGAGAATCACTAATAACGAACAGTTACGAATAATA 528 consensus_2594#1 AATAATAATACGTGGAAGAATGGGTCGAAAATCACTAATAACGAACAGTTACGAATAATA 461 **************************** ******************************* consensus_2594#0 CTAATCATATTTATCATAGGCTATTATT 556 consensus_2594#1 CT-------------------------- 463 ** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |