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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2612#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 539 fasta sequence
[GAATGTAGGTTTACAAACATCGTTTGAAAGAATAGTAATAATACAGTGGAGTTTGCGAGTCTAAAAGAAAATCGAGCGAGAAAAAGAGATACATTTATACGATTTTAAATATACCGCCAGGACCATTGCCTCTTCGATTTTGGAGGCGGGGCAAAATACGAATCGAAGAGGTTTCGATTCAAATGATGATATATATGAGAGATAACTTTACTATAAGAATACGTTTTAATCCGTACGTATGTCGATAATATTTCTTACAGTTCTCTGTAACATAAGTTTCCCTAGTTATAATGTTAAGAAGATGTAGATTTTTGGATTCTCATGATAAACATTCTATTTTGCGTAATGAATACGAGTAAGAAGGCACTCGGTCCCCTTTACGATGGAACTCTGTGCGTTATAATTGTTCGTGGACAAAGAATGAATATTTCGTATGTCGACGTTCGCCGAGATTTTGCCAGGAGAACAGATCGCGATGCTACCAATTCATCGCGTAAATATCCCTATATTGCAACTTATCCCATATGTCTGTCCTTCTT]
[+] EMBL BI502996 [GAATGTAGGTTTACAAACATCGTTTGAAAGAATAGTAATAATACAGTGGAGTTTGCGAGTCTAAAAGAAAATCGAGCGAGAAAAAGAGATACATTTATACGATTTTAAATATACCGCCAGGACCATTGCCTCTTCGATTTTGGAGGCGGGGCAAAATACGAATCGAAGAGGTTTCGATTCAAATGATGATATATATGAGAGATAACTTTACTATAAGAATACGTTTTAATCCGTACGTATGTCGATAATATTTCTTACAGTTCTCTGTAACATAAGTTTCCCTAGTTATAATGTTAAGAAGATGTAGATTTTTGGATTCTCATGATAAACATTCTATTTTGCGTAATGAATACGAGTAAGAAGGCACTCGGTCCCCTTTACGATGGAACTCTGTGCGTTATAATTGTTCGTGGACAAAGAATGAATATTTCGTATGTCGACGTTCGCCGAGATTTTGCCAGGAGAACAGATCGCGATGCTACCAATTCATCGCGTAAATATCCCTATATTGCAACTTATCCCATATGTCTGTCCTTCTT]
consensusID : consensus_2612#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 424 fasta sequence
[CATTGTCACTTTTATTGAAACACTCTTTAGGGTATACAAGCTATTCTAGATAAGCATTAAGGAAAGTATAAAAAAAAAAAAAAAGAAAACATTGAACAACTGCTTACGAAATCACAAAGTGGATGTCTGTTCTTATTATCGTATCATTCGAACAGGTGCATTCGAAGGCACAACGATCCTCGACCCTTACGCATCGAGTATTTCGCCATGAAAACACGAACAATATGATGAAAATCGACGCACTATCGTATCTCAGTATCGTCGTAGCGAAACATCGTTTCACATTGGTCAAGCACAACGTGAAAACACGGACAATGACATATCCAATGCCCTATAAAAAAAAAAAAACTAACCTTAAAGAAGAAAGAATGCAAAGAAGGACAGACATATGGGATAAGTTGCAATATAGGGATATTTACGCGAT]
[+] EMBL BI515554 [CATTGTCACTTTTATTGAAACACTCTTTAGGGTATACAAGCTATTCTAGATAAGCATTAAGGAAAGTATAAAAAAAAAAAAAAAGAAAACATTGAACAACTGCTTACGAAATCACAAAGTGGATGTCTGTTCTTATTATCGTATCATTCGAACAGGTGCATTCGAAGGCACAACGATCCTCGACCCTTACGCATCGAGTATTTCGCCATGAAAACACGAACAATATGATGAAAATCGACGCACTATCGTATCTCAGTATCGTCGTAGCGAAACATCGTTTCACATTGGTCAAGCACAACGTGAAAACACGGACAATGACATATCCAATGCCCTATAAAAAAAAAAAAACTAACCTTAAAGAAGAAAGAATGCAAAGAAGGACAGACATATGGGATAAGTTGCAATATAGGGATATTTACGCGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2612#0 GAATGTAGGTTTACAAACATCGTTTGAAAGAATAGTAATAATACAGTGGAGTTTGCGAGT 60
consensus_2612#1 CATTGTCACTTTTATTGAAACACTCTTTAGGGTATACAAGCTATTCTAGA---TAAGCAT 57
* *** *** * * * ** ** * ** * ** * * *
consensus_2612#0 CTAAAAGAAAATCGAGCGAGAAAAAGAGATACATTTATACGATTTTAAATATACCGCCAG 120
consensus_2612#1 TAAGGAAAGTATAAAAAAAAAAAAAAAGAAAACATTGAACAACTGCTTACGAAATCACAA 117
* * * ** * * ***** *** * ** ** * * * * **
consensus_2612#0 GACCATTGCCTCTTCG-ATTTTGGAGGCGGGGCAAAATACGAAT-CGAAGAGGTTTCGAT 178
consensus_2612#1 AGTGGATGTCTGTTCTTATTATCGTATCATTCGAACAGGTGCATTCGAAGGCACAACGAT 177
** ** *** *** * * * ** * * ** ***** ****
consensus_2612#0 TCAAATGATGATATATATG-AGAGATAACTTTACTATAAGAATACGTTTTAATCCGTACG 237
consensus_2612#1 CCT-----CGACCCTTACGCATCGAGTATTTCGCCATGAAAACACGAAC-AATATG-ATG 230
* ** ** * * ** * ** * ** * ** *** *** * * *
consensus_2612#0 TATGTCGATAATATTTCTTACAGTTCTCTGTAACATAAGTTTCCCTAGTTATAATGTTAA 297
consensus_2612#1 AAAATCGACGCACTATCGTA----TCTCAGTATCGT---CGTAGCGAAACATCGTTTCAC 283
* **** * ** ** **** *** * * * * * ** * * *
consensus_2612#0 GAAGATGTAGATTTTTGGATTCTCATGATAAACATTCTATTTTGCGTAATGAATACGAGT 357
consensus_2612#1 ATTGGTCAAGCACAACGTGAAAACACGGACAATGACATATCCAATGC----CCTATAAAA 339
* * ** * ** * ** *** * ** *
consensus_2612#0 AAGAAGGCACTCGGTCCCCTTTACGATGGAACTCTGTGCGTTATAATTGTTCGTGGACAA 417
consensus_2612#1 AAAAAAAAACTAA----CCTTAAAGAAGAAAGAATGC-----AAAGAAGGACAGACATAT 390
** ** *** **** * ** * ** ** * * * * * *
consensus_2612#0 AGAATGAATATTTCGTATGTCGACGTTCGCCGAGATTTTGCCAGGAGAACAGATCGCGAT 477
consensus_2612#1 GGGATAAGT-TGCAATATAGGGATATTTAC-GCGAT------------------------ 424
* ** * * * *** ** ** * * ***
consensus_2612#0 GCTACCAATTCATCGCGTAAATATCCCTATATTGCAACTTATCCCATATGTCTGTCCTTC 537
consensus_2612#1 ------------------------------------------------------------
consensus_2612#0 TT 539
consensus_2612#1 --
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |