These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2612#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 539 fasta sequence [GAATGTAGGTTTACAAACATCGTTTGAAAGAATAGTAATAATACAGTGGAGTTTGCGAGTCTAAAAGAAAATCGAGCGAGAAAAAGAGATACATTTATACGATTTTAAATATACCGCCAGGACCATTGCCTCTTCGATTTTGGAGGCGGGGCAAAATACGAATCGAAGAGGTTTCGATTCAAATGATGATATATATGAGAGATAACTTTACTATAAGAATACGTTTTAATCCGTACGTATGTCGATAATATTTCTTACAGTTCTCTGTAACATAAGTTTCCCTAGTTATAATGTTAAGAAGATGTAGATTTTTGGATTCTCATGATAAACATTCTATTTTGCGTAATGAATACGAGTAAGAAGGCACTCGGTCCCCTTTACGATGGAACTCTGTGCGTTATAATTGTTCGTGGACAAAGAATGAATATTTCGTATGTCGACGTTCGCCGAGATTTTGCCAGGAGAACAGATCGCGATGCTACCAATTCATCGCGTAAATATCCCTATATTGCAACTTATCCCATATGTCTGTCCTTCTT] [+] EMBL BI502996 [GAATGTAGGTTTACAAACATCGTTTGAAAGAATAGTAATAATACAGTGGAGTTTGCGAGTCTAAAAGAAAATCGAGCGAGAAAAAGAGATACATTTATACGATTTTAAATATACCGCCAGGACCATTGCCTCTTCGATTTTGGAGGCGGGGCAAAATACGAATCGAAGAGGTTTCGATTCAAATGATGATATATATGAGAGATAACTTTACTATAAGAATACGTTTTAATCCGTACGTATGTCGATAATATTTCTTACAGTTCTCTGTAACATAAGTTTCCCTAGTTATAATGTTAAGAAGATGTAGATTTTTGGATTCTCATGATAAACATTCTATTTTGCGTAATGAATACGAGTAAGAAGGCACTCGGTCCCCTTTACGATGGAACTCTGTGCGTTATAATTGTTCGTGGACAAAGAATGAATATTTCGTATGTCGACGTTCGCCGAGATTTTGCCAGGAGAACAGATCGCGATGCTACCAATTCATCGCGTAAATATCCCTATATTGCAACTTATCCCATATGTCTGTCCTTCTT] consensusID : consensus_2612#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 424 fasta sequence [CATTGTCACTTTTATTGAAACACTCTTTAGGGTATACAAGCTATTCTAGATAAGCATTAAGGAAAGTATAAAAAAAAAAAAAAAGAAAACATTGAACAACTGCTTACGAAATCACAAAGTGGATGTCTGTTCTTATTATCGTATCATTCGAACAGGTGCATTCGAAGGCACAACGATCCTCGACCCTTACGCATCGAGTATTTCGCCATGAAAACACGAACAATATGATGAAAATCGACGCACTATCGTATCTCAGTATCGTCGTAGCGAAACATCGTTTCACATTGGTCAAGCACAACGTGAAAACACGGACAATGACATATCCAATGCCCTATAAAAAAAAAAAAACTAACCTTAAAGAAGAAAGAATGCAAAGAAGGACAGACATATGGGATAAGTTGCAATATAGGGATATTTACGCGAT] [+] EMBL BI515554 [CATTGTCACTTTTATTGAAACACTCTTTAGGGTATACAAGCTATTCTAGATAAGCATTAAGGAAAGTATAAAAAAAAAAAAAAAGAAAACATTGAACAACTGCTTACGAAATCACAAAGTGGATGTCTGTTCTTATTATCGTATCATTCGAACAGGTGCATTCGAAGGCACAACGATCCTCGACCCTTACGCATCGAGTATTTCGCCATGAAAACACGAACAATATGATGAAAATCGACGCACTATCGTATCTCAGTATCGTCGTAGCGAAACATCGTTTCACATTGGTCAAGCACAACGTGAAAACACGGACAATGACATATCCAATGCCCTATAAAAAAAAAAAAACTAACCTTAAAGAAGAAAGAATGCAAAGAAGGACAGACATATGGGATAAGTTGCAATATAGGGATATTTACGCGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2612#0 GAATGTAGGTTTACAAACATCGTTTGAAAGAATAGTAATAATACAGTGGAGTTTGCGAGT 60 consensus_2612#1 CATTGTCACTTTTATTGAAACACTCTTTAGGGTATACAAGCTATTCTAGA---TAAGCAT 57 * *** *** * * * ** ** * ** * ** * * * consensus_2612#0 CTAAAAGAAAATCGAGCGAGAAAAAGAGATACATTTATACGATTTTAAATATACCGCCAG 120 consensus_2612#1 TAAGGAAAGTATAAAAAAAAAAAAAAAGAAAACATTGAACAACTGCTTACGAAATCACAA 117 * * * ** * * ***** *** * ** ** * * * * ** consensus_2612#0 GACCATTGCCTCTTCG-ATTTTGGAGGCGGGGCAAAATACGAAT-CGAAGAGGTTTCGAT 178 consensus_2612#1 AGTGGATGTCTGTTCTTATTATCGTATCATTCGAACAGGTGCATTCGAAGGCACAACGAT 177 ** ** *** *** * * * ** * * ** ***** **** consensus_2612#0 TCAAATGATGATATATATG-AGAGATAACTTTACTATAAGAATACGTTTTAATCCGTACG 237 consensus_2612#1 CCT-----CGACCCTTACGCATCGAGTATTTCGCCATGAAAACACGAAC-AATATG-ATG 230 * ** ** * * ** * ** * ** * ** *** *** * * * consensus_2612#0 TATGTCGATAATATTTCTTACAGTTCTCTGTAACATAAGTTTCCCTAGTTATAATGTTAA 297 consensus_2612#1 AAAATCGACGCACTATCGTA----TCTCAGTATCGT---CGTAGCGAAACATCGTTTCAC 283 * **** * ** ** **** *** * * * * * ** * * * consensus_2612#0 GAAGATGTAGATTTTTGGATTCTCATGATAAACATTCTATTTTGCGTAATGAATACGAGT 357 consensus_2612#1 ATTGGTCAAGCACAACGTGAAAACACGGACAATGACATATCCAATGC----CCTATAAAA 339 * * ** * ** * ** *** * ** * consensus_2612#0 AAGAAGGCACTCGGTCCCCTTTACGATGGAACTCTGTGCGTTATAATTGTTCGTGGACAA 417 consensus_2612#1 AAAAAAAAACTAA----CCTTAAAGAAGAAAGAATGC-----AAAGAAGGACAGACATAT 390 ** ** *** **** * ** * ** ** * * * * * * consensus_2612#0 AGAATGAATATTTCGTATGTCGACGTTCGCCGAGATTTTGCCAGGAGAACAGATCGCGAT 477 consensus_2612#1 GGGATAAGT-TGCAATATAGGGATATTTAC-GCGAT------------------------ 424 * ** * * * *** ** ** * * *** consensus_2612#0 GCTACCAATTCATCGCGTAAATATCCCTATATTGCAACTTATCCCATATGTCTGTCCTTC 537 consensus_2612#1 ------------------------------------------------------------ consensus_2612#0 TT 539 consensus_2612#1 -- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |