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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence
[TTATTCTGGGGATGTTATGTTGATAGCATCGATAATGAGGGCAGAACAGTTTTGAGTGTGGCTGCTGCTCAAGGTGGCACAGATGTAGTAAAACAATTATTAGATCGAGGCTTAGACGAACAACATAGAGACAATTCAGGTTGGACACCCTTACATTATGCAGCATTTGAAGGTCACATTGATGTTTGCGAAGCACTACTAGAAGCAGGAGCCAAAATTGATGAAACTGACAATGATGGAAAAGGTGCACTAATGTTGGCTGCACAAGAAGGACATGCTGCATTAGTTGAAAGATTGTTAGAACAGCATGGAGCGCCAATCGATCAACATGCTCATGATGGAAAAACTGCTCTCAGACTTGCAGCTTTGGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCT]
[+] EMBL BI515617 [TTATTCTGGGGATGTTATGTTGATAGCATCGATAATGAGGGCAGAACAGTTTTGAGTGTGGCTGCTGCTCAAGGTGGCACAGATGTAGTAAAACAATTATTAGATCGAGGCTTAGACGAACAACATAGAGACAATTCAGGTTGGACACCCTTACATTATGCAGCATTTGAAGGTCACATTGATGTTTGCGAAGCACTACTAGAAGCAGGAGCCAAAATTGATGAAACTGACAATGATGGAAAAGGTGCACTAATGTTGGCTGCACAAGAAGGACATGCTGCATTAGTTGAAAGATTGTTAGAACAGCATGGAGCGCCAATCGATCAACATGCTCATGATGGAAAAACTGCTCTCAGACTTGCAGCTTTGGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCT]
consensusID : consensus_2613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[GGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCTTTATATTCTTGCTCTAGAGAACAGATTGGCAATGGCACGATTTTTGTTGGAGCATGCTCGAGCAGATGTAGAAAGCAGGGATTCAGAAGGACGAACTCCTCTGCATGTAAGTGCTTGGCAGGGACATGTCGAAATGGTAGCTTTGTTATTAACAGAAGGTGGTGCTAGTGTAAATGCTTGTGACAATGAGAATAGAACTCCTTTACATTCTGCAGCCTGGCAAGGTCATGCAGCCATTGTCAGATTGCTCCTTGAACATGGAGCAACTCCTGATCATACTTGTAATCAAGGAGCAACAGCTTT]
[+] EMBL BI517104 [GGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCTTTATATTCTTGCTCTAGAGAACAGATTGGCAATGGCACGATTTTTGTTGGAGCATGCTCGAGCAGATGTAGAAAGCAGGGATTCAGAAGGACGAACTCCTCTGCATGTAAGTGCTTGGCAGGGACATGTCGAAATGGTAGCTTTGTTATTAACAGAAGGTGGTGCTAGTGTAAATGCTTGTGACAATGAGAATAGAACTCCTTTACATTCTGCAGCCTGGCAAGGTCATGCAGCCATTGTCAGATTGCTCCTTGAACATGGAGCAACTCCTGATCATACTTGTAATCAAGGAGCAACAGCTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2613#0 TTATTCTGGGGATGTTATGTTGATAGCATCGATAATGAGGGCAGAACAGTTTTGAGTGTG 60
consensus_2613#1 ------------------------------------------------------------
consensus_2613#0 GCTGCTGCTCAAGGTGGCACAGATGTAGTAAAACAATTATTAGATCGAGGCTTAGACGAA 120
consensus_2613#1 --------GGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGATGTG 52
***** *** ** * * ****** ** *** *
consensus_2613#0 CAACATAGAGACAATTCAGGTTGGACACCCTTACATTATGCAGCATTTGAAGGTCACATT 180
consensus_2613#1 -AATGCAAAAGATGCTGATGGGAGAAGCACTCTTTATATTCTTGCTCTAGAGAACAGATT 111
** * * * * * ** * ** *** * * * ** ** ***
consensus_2613#0 GATGTTTGCGAAGCACTACTAGAAGCAGG----AGCCAAAATTGATGAAACTGACAATGA 236
consensus_2613#1 GGCAATGGCACGATTTTTGTTGGAGCATGCTCGAGCAGATGTAGAAAGCAGGGATTCAGA 171
* * ** * * * **** * *** * * ** * ** **
consensus_2613#0 TGGAAAAGGTGCACTAATGTTGGCTGCACAAGAAGGACATGCTGCATTAGTTGAAAGATT 296
consensus_2613#1 AGGACGAACTCCTCTGCATGTAAGTGCTTGGCAGGGACATGTCGAAATGGTAGCTTTGTT 231
*** * * * ** * *** * ******* * * * ** * **
consensus_2613#0 GTTAGAACAGCATGGAGCGCCAATCGATCAACATGCTCATGATGGAAAAACTGCTCTCAG 356
consensus_2613#1 ATTAACAGAAGGTGGTGCTAGTGTAAATGCTTGTGACAATGAGAATAGAACTCCTTTACA 291
*** * * *** ** * ** ** **** * **** ** *
consensus_2613#0 ACTTGCAGCTTTGGAAGGTCATTACGATACTGTCAGGGTACTATTAGCTCATAATGCAGA 416
consensus_2613#1 TTCTGCAGCCTGGCAAGGTCATGCAGCCATTGTCAGATTGCTCCTTGAACATGGAGCAAC 351
****** * * ******** * * ****** * ** * * *** ***
consensus_2613#0 TGTGAATGCAAAAGATGCTGATGGGAGAAGCACTCT 452
consensus_2613#1 TCCTGATCATACTTGTAATCAAGGAGCAACAGCTTT 387
* ** * * * * ** ** ** *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |