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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_264#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence
[CAGCTCACCAGTTTGATTCGGACCAAGCGTTTTTCCTGTTTCGATATCTATAATTTTTATTTGGCAATTTGGAATCACAATGCCACAAGAACCACTTGTAGCAATTGATGATTGTATGGTAATTATACCACCTAATTCTGTCATGCCATATGCCTGTATAATCATAGTATTTGATAAATATTTTTTTATTATATCTTGAGTTTCTCGATTCAATGCAGATCCACCAATAATGGCAAATTTTAAATTGGAAATATCATAATCGTGTAAATAATCATATCGTACAAATCGATTTGCCATGCTGGTACTTAACATTATCCAATCAACCTTATATTTTTCAATTATTTCGCAAGCAATCTTCTCATTGAATTCTGGTGCACTTATTTTCTTGATATGGAAATAAATACTTTTGAGATTAAGAAACGATCCACTAATCCAGTACAAAGGAGTAAACCACAATTGTGTTTGAATACCATAAGGAAAACCTTCTCTTAGTTCCATAATATTCAAAATTGACTTATGTGAAAGTTGTACGCCTTTAGGCATACCCGTTGTTCCAGATGAAAACATGATCAAACCAGTATGTGAGGGATCGTCAATATCAGTGCATTGAAAATTAGCTACAGTTGATTTATCATGATATTTTAATGTCTCCGAAAA]
[+] EMBL BE844586 [CAGCTCACCAGTTTGATTCGGACCAAGCGTTTTTCCTGTTTCGATATCTATAATTTTTATTTGGCAATTTGGAATCACAATGCCACAAGAACCACTTGTAGCAATTGATGATTGTATGGTAATTATACCACCTAATTCTGTCATGCCATATGCCTGTATAATCATAGTATTTGATAAATATTTTTTTATTATATCTTGAGTTTCTCGATTCAATGCAGATCCACCAATAATGGCAAATTTTAAATTGGAAATATCATAATCGTGTAAATAATCATATCGTACAAATCGATTTGCCATGCTGGTACTTAACATTATCCAATCAACCTTATATTTTTCAATTATTTCGCAAGCAATCTTCTCATTGAATTCTGGTGCACTTATTTTCTTGATATGGAAATAAATACTTTTGAGATTAAGAAACGATCCACTAATCCAGTACAAAGGAGTAAACCACAATTGTGTTTGAATACCATAAGGAAAACCTTCTCTTAGTTCCATAATATTCAAAATTGACTTATGTGAAAGTTGTACGCCTTTAGGCATACCCGTTGTTCCAGATGAAAACATGATCAAACCAGTATGTGAGGGATCGTCAATATCAGTGCATTGAAAATTAGCTACAGTTGATTTATC ]
[+] EMBL BE844665 [ ATTTTTATTTGGCAATTTGGAATCACAATGCCACAAGAACCACTTGTAGCAATTGATGATTGTATGGTAATTATACCACCTAATTCTGTCATGCCATATGCCTGTATAATCATAGTATTTGATAAATATTTTTTTATTATATCTTGAGTTTCTCGATTCAATGCAGATCCACCAATAATGGCAAATTTTAAATTGGAAATATCATAATCGTGTAAATAATCATATCGTACAAATCGATTTGCCATGCTGGTACTTAACATTATCCAATCAACCTTATATTTTTCAATTATTTCGCAAGCAATCTTCTCATTGAATTCTGGTGCACTTATTTTCTTGATATGGAAATAAATACTTTTGAGATTAAGAAACGATCCACTAATCCAGTACAAAGGAGTAAACCACAATTGTGTTTGAATACCATAAGGAAAACCTTCTCTTAGTTCCATAATATTCAAAATTGACTTATGTGAAAGTTGTACGCCTTTAGGCATACCCGTTGTTCCAGATGAAAACATGATCAAACCAGTATGTGAGGGATCGTCAATATCAGTGCATTGAAAATTAGCTACAGTTGATTTATCATGATATTTTAATGTCTCCGAAAA]
consensusID : consensus_264#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 652 fasta sequence
[GCTTTGATAAATTAAAATCAACTTATTCTGATTTTTTTAGTGTAACTTTTATAATAATCATCAATATGTGCATCGATGACAAGAAAGATGATAATACAGAATTAGACAGAATGTTTACAATCGAAAACAACGTGCTGAAAGGAAGAGTGATATCGAATGATAATGGATATACTAGCGTAGGGAAATTAATATTCGACACTTTTAGAAGCAAACCAAACTTTGTTTGGCAGGTTGATGCGATTTCAGGAATCGAAGATAATTTTTCCGATATATGCGATCGGACAATAAAATGTGCACTTTGGATGCAGAAACATGGAGTGAAAAAAGGCGACATTGTCGCAATCTGTTCACACAATCACCGTGATTGTATAATTCCTTTTCTTGCTACACTCTATCTAGGTGCCATTGTCAATCCATGGGATCATCTGATGAATATTGATATGGCACGACATTTTATAACATTATCTCAACCAAGGGTAATTTTCGTGAATGAAGGATCAGCAGAAATCGCATTAGAAGCGGCAAAAAATTGAACTTCATCATACAAAACTAGTATGTTTTGGCTATTATCCTGGCATAATACCATTTTCGGAGACATTAAAATATCATGATAAATCAACTGTAGCTAATTTTCAATGCACTGATATTGACG]
[+] EMBL BE844471 [GCTTTGATAAATTAAAATCAACTTATTCTGATTTTTTTAGTGTAACTTTTATAATAATCATCAATATGTGCATCGATGACAAGAAAGATGATAATACAGAATTAGACAGAATGTTTACAATCGAAAACAACGTGCTGAAAGGAAGAGTGATATCGAATGATAATGGATATACTAGCGTAGGGAAATTAATATTCGACACTTTTAGAAGCAAACCAAACTTTGTTTGGCAGGTTGATGCGATTTCAGGAATCGAAGATAATTTTTCCGATATATGCGATCGGACAATAAAATGTGCACTTTGGATGCAGAAACATGGAGTGAAAAAAGGCGACATTGTCGCAATCTGTTCACACAATCACCGTGATTGTATAATTCCTTTTCTTGCTACACTCTATCTAGGTGCCATTGTCAATCCATGGGATCATCTGATGAATATTGATATGGCACGACATTTTATAACATTATCTCAACCAAAAGTAATTTTCGTGAATGAAGGATCAGCAGAAATCGCATTAGAAGCGGCAAAAAATTGAACTTCATCATACAAAACTAGTATGTTTTGGCTATTATCCTGG ]
[+] EMBL BE844623 [GCTTTGATAAATTAAAATCAACTTATTCTGATTTTTTTAGTGTAACTTTTATAATAATCATCAATATGTGCATCGATGACAAGAAAGATGATAATACAGAATTAGACAGAATGTTTACAATCGAAAACAACGTGCTGAAAGGAAGAGTGATATCGAATGATAATGGATATACTAGCGTAGGGAAATTAATATTCGACACTTTTAGAAGCAAACCAAACTTTGTTTGGCAGGTTGATGCGATTTCAGGAATCGAAGATAATTTTTCCGATATATGCGATCGGACAATAAAATGTGCACTTTGGATGCAGAAACATGGAGTGAAAAAAGGCGACATTGTCGCAATCTGTTCACACAATCACCGTGATTGTATAATTCCTTTTCTTGCTACACTCTATCTAGGTGCCATTGTCAATCCATGGGATCATCTGATGAATATTGATATGGCACGACATTTTATAACATT ]
[+] EMBL BE844584 [ TCTGATTTTTTTAGTGTAACTTTTATAATAATCATCAATATGTGCATCGATGACAAGAAAGATGATAATACAGAATTAGACAGAATGTTTACAATCGAAAACAACGTGCTGAAAGGAAGAGTGATATCGAATGATAATGGATATACTAGCGTAGGGAAATTAATATTCGACACTTTTAGAAGCAAACCAAACTTTGTTTGGCAGGTTGATGCGATTTCAGGAATCGAAGATAATTTTTCCGATATATGCGATCGGACAATAAAATGTGCACTTTGGATGCAGAAACATGGAGTGAAAAAAGGCGACATTGTCGCAATCTGTTCACACAATCACCGTGATTGTATAATTCCTTTTCTTGCTACACTCTATCTAGGTGCCATTGTCAATCCATGGGATCATCTGATGAATATTGATATGGCACGACATTTTATAACATTATCTCAACCAAGGGTAATTTTCGTGAATGAAGGATCAGCAGAAATCGCATTAGAAGCGGC AAAAATTGAACTTCATCATACAAAACTAGTATGTTTTGGCTATTATCCTGGCATAATACCATTTTCGGAGACATTAAAATATCATGATAAATCAACTGTAGCTAATTTTCAATGCACTGATATTGACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_264#0 CAGCTCACCAGTTTGATTCGGACCAAGC-GTTTTTCCTGTTTCGATATCTATAATTTTTA 59
consensus_264#1 GCTTTGATAAATTAAAATCAACTTATTCTGATTTTTTTAGTGTAACTTTTATAATAATCA 60
* * * ** * ** * * * **** * * * * ****** * *
consensus_264#0 TTTGGCAATTTGGAATCACAATGCCACAAGAACCACTTGTAGCAATTGATGATTGTATGG 119
consensus_264#1 T----CAATATGTG-CATCGATGACAAGAAAGATGATAATACAGAATTA-GACAGAATGT 114
* **** ** * *** ** * * * ** * * * ** * ***
consensus_264#0 TAATTATACCACCTAA--TTCTGTCATGCCATATGCCTGTATAATCATAGTATTTG-ATA 176
consensus_264#1 TTACAATCGAAAACAACGTGCTGAAAGGAAGAGTGA-TATCGAATGATAATGGATATACT 173
* * ** * ** * *** * * ** * * *** *** * * *
consensus_264#0 AATATTTTTTTATTA-TATCTTGAGTTTCTCGATTCAATGCAGATCCACCAATAATGGCA 235
consensus_264#1 AGCGTAGGGAAATTAATATTCGACACTTTTAGAAGCAAACCAAACTTTGTTTGGCAGGTT 233
* * **** *** ** * ** *** ** * **
consensus_264#0 AATTTTAAATTGGAAAT--ATCATAATCGTGTAAATA-ATCATATCGTACAAATCGATTT 292
consensus_264#1 GATGCGATTTCAGGAATCGAAGATAATTTTTCCGATATATGCGATCGGACAATAAAATGT 293
** * * * *** * ***** * *** ** **** **** ** *
consensus_264#0 GCCATGCTGGTACTTAA-CATT-ATCCAATCAACCTTATATTTTT-CAATTATTTCGCAA 349
consensus_264#1 GCACTTTGGATGCAGAAACATGGAGTGAAAAAAGGCGACATTGTCGCAATCTGTTCACA- 352
** * * * * ** *** * ** ** * *** * **** *** **
consensus_264#0 GCAATCTTC-TCATTGAATTCTGGTGCACTTATTTTCTTGATATGGAAATAAATACTTTT 408
consensus_264#1 -CAATCACCGTGATTGTATAAT----TCCTTTTCTTGCTACACTCTATCTAGGTGCCATT 407
***** * * **** ** * *** * ** * * * ** * * **
consensus_264#0 G--AGATTAAGAAACGATCCACTAATC--CAGTACAAAGGAGTAAACCACAATTGTGTTT 464
consensus_264#1 GTCAATCCATGGGATCATCTGATGAATATTGATATGGCACGACATTTTATAACATTATCT 467
* * * * * *** * * ** * * ** * * *
consensus_264#0 GAATACCATAAGGAAAACCTTCTCTTA-----GTTCCATAATATTCAAAATTGACTTATG 519
consensus_264#1 CAAC----CAAGGGTAATTTTCGTGAATGAAGGATCAGCAGAAATCGCATTAGAAGCGGC 523
** **** ** *** * * ** * * ** * * **
consensus_264#0 TGAAAGTTGTACGCCTTTAGGCATACCCGTT--GTTCCAGATGAAAACATGATCAAACCA 577
consensus_264#1 AAAAAATTGAACTTCATCATACAAAACTAGTATGTTTTGGCTATTATCCTGG-CATAATA 582
*** *** ** * * * ** * * * *** * * * * ** ** * *
consensus_264#0 GTATGTGAGGGATCGTCAATATCAGTGCATTGAAAATTAGCTACAGTTGATTTATCATGA 637
consensus_264#1 CCATTTTCGGAGACATTAAAATAT---CATGATAAATCAACTGTAGCTAATTT-TCA--A 636
** * ** * * ** ** *** **** * ** ** * **** *** *
consensus_264#0 TATTTTAATGTCTCCGAAAA 657
consensus_264#1 TGCACTGATATTGACG---- 652
* * ** * **
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |